prot_H-paniculata_contig883.16739.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig883.16739.1
Unique Nameprot_H-paniculata_contig883.16739.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length751
Homology
BLAST of mRNA_H-paniculata_contig883.16739.1 vs. uniprot
Match: A0A6H5JYB8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYB8_9PHAE)

HSP 1 Score: 387 bits (993), Expect = 6.380e-122
Identity = 250/531 (47.08%), Postives = 301/531 (56.69%), Query Frame = 0
Query:  257 GASQQRGVDSCARKRERAKLLRQQMNDGLDSLHEALVEISASGANPAAAATTGLIPTRGPRRAAVVACSSSLVRDLIATCITLRAENVALNERLVQPASPAKSVDVAAAAAEVV-------------------------GGTGGDKNARNGPQAVVGGGNVVELDHGAEAAKVFGQLLSLNVFGFLGPQALGEGRAVCRSWRDKCTWDCCWSNLCVSRWRLCSEERHAEVWRPAPPDELV--------------AVVSPPEPPPSWRQVYGRLHRELRVPTGAFRPVHLIIGRNVQQGVAVWIALSRRSNGMTGRSVM--GTKAFRSTEVIELRAVIQRVDEGPAIAVHPRAFRVRRINTNKGFGNHVTTGGXXXXASGSSFSNTANATTAEV---FPSISDRDGRFAPTVAINTGLADG----------------------ASDQASAGCGMGAAGGVGRQREVTMVALHEYATVDFFIKTAGCPTERDFLRLPTCVDVGVSTAISRREAGVDVRGGHGPIVLPVVLNER 721
            GA  QRG +S +RKR+RAKLLRQQMNDGLD+LHEALVEIS SGAN +A+A T LIPTRGPRRAAVVACS+ LVRDLI+TCI LR +  +L  RL +                                           G  G D    +G  A  G          A +AKVFGQLLSL+VFGFLGPQ+L E   V R WRDKCTWDC WS LCVSRWRL  E+RHAEVWR   PD+                +V+SPP PPP+W+ +YGRLHR++  P+G F P H++IGR+VQ+GVAVWIAL+RRSNGMTGRSVM  G+   R+TEVIELRAV+QRV+EGPA+ VHP AF+VRR++  +      + G XXXX                    FP +S    RF+P   IN G  +                        +   S+  G  AA           +AL+EYA VDFFI+ AGCPTE DFLRL  CVDV VS A +       + G  G  +L V L ER
Sbjct:   41 GAPNQRGGESFSRKRDRAKLLRQQMNDGLDNLHEALVEISTSGANLSASAATSLIPTRGPRRAAVVACSAGLVRDLISTCIALRKDKASLLARLAEALRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSHGRDSGGASGAVATAGV---------ASSAKVFGQLLSLSVFGFLGPQSLEEASKVSRDWRDKCTWDCNWSTLCVSRWRLGPEQRHAEVWRV--PDDADGTGKXXXXXKGVARSVLSPPAPPPTWQSIYGRLHRDVHAPSGTFCPSHMVIGRSVQEGVAVWIALNRRSNGMTGRSVMTQGSTGLRTTEVIELRAVVQRVEEGPAVRVHPHAFKVRRVSGLRALLKDHSDGXXXXXXXXXXXXXXXXXXXXXXXGFFPPVSQGKDRFSPKFTINRGAVESXXXXXXXXXXXXXXXXXXXXXXGAGVRSSWSGTAAAAASLAAEATPPLALYEYAVVDFFIEAAGCPTEADFLRLEACVDVAVSGAAASAAGATPIVGSVGVPLLSVGLTER 560          
BLAST of mRNA_H-paniculata_contig883.16739.1 vs. uniprot
Match: D8LR75_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR75_ECTSI)

HSP 1 Score: 387 bits (995), Expect = 1.360e-120
Identity = 251/529 (47.45%), Postives = 303/529 (57.28%), Query Frame = 0
Query:  257 GASQQRGVDSCARKRERAKLLRQQMNDGLDSLHEALVEISASGANPAAAATTGLIPTRGPRRAAVVACSSSLVRDLIATCITLRAENVALNERLVQPASPAKSVDVAAAAAEVV-------------------------------GGTGGDKNARNGPQAVVGGGNVVELDHGAEAAKVFGQLLSLNVFGFLGPQALGEGRAVCRSWRDKCTWDCCWSNLCVSRWRLCSEERHAEVWRPAPPDELV----------AVVSPPEPPPSWRQVYGRLHRELRVPTGAFRPVHLIIGRNVQQGVAVWIALSRRSNGMTGRSVM--GTKAFRSTEVIELRAVIQRVDEGPAIAVHPRAFRVRRINTNKGFGNHVTTGGXXXXASGSSFSNTANATTAEVFPSISDRDGRFAPTVAINTGLADG---------------------ASDQASAGCGMGAAGGVGRQREVTMVALHEYATVDFFIKTAGCPTERDFLRLPTCVDVGVSTAISRREAGVDVRGGHGPIVLPVVLNER 721
            GA  QRG +S +RKR+RAKLLRQQMNDGLD+LHEALVEIS SGAN +A+A T LIPTRGPRRAAVVACS+ LVRDLI+TCI LR +  +L+ R  +     +                                           GG GG      G +AVVG          A +AKVFGQLLSL+VFGFLGPQ+L E   V R WRDKCTWDC WS LCVSRWRL  E+RHAEVWR   PD+            + VSPP PPP+W+ +YGRLH ++  P+G F P H++IGR+VQ+GVAVWIAL+RRSNGMTGRSVM  G+   R+TEVIELRAV+QRV+EGPA+ VHP AF+VRR++  +   N  +    XXX                 FP +S  + RF+P   IN G A+                       +   S+  G  AA           +AL+EYA VDFFI+ AGCPTE DFLRL  CVDV VS A +       V G     +L V L ER
Sbjct:  186 GAPNQRGGESFSRKRDRAKLLRQQMNDGLDNLHEALVEISTSGANLSASAATSLIPTRGPRRAAVVACSAGLVRDLISTCIALRKDKASLSARFAEALRQLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSHGLDSGGAGG------GAEAVVGV---------ASSAKVFGQLLSLSVFGFLGPQSLEEASKVSREWRDKCTWDCNWSTLCVSRWRLGPEQRHAEVWRV--PDDADGKGKXXXVARSAVSPPAPPPTWQSIYGRLHGDVHAPSGTFCPSHMVIGRSVQEGVAVWIALTRRSNGMTGRSVMTQGSTGLRTTEVIELRAVVQRVEEGPAVRVHPHAFKVRRVSGLRALLNDHS---GXXXXXXXXXXXXXXXXXXGFFPPVSQGEDRFSPKFTINRGAAESXXXXXXXXXXXXXXXXXXRGAGAGVRSSWSGTAAATASPAAEATPPLALYEYAAVDFFIEAAGCPTEADFLRLEACVDVAVSGATASAAGATPVVGSVCVPLLSVGLTER 694          
BLAST of mRNA_H-paniculata_contig883.16739.1 vs. uniprot
Match: A0A835YLV5_9STRA (BHLH domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLV5_9STRA)

HSP 1 Score: 127 bits (319), Expect = 1.000e-26
Identity = 123/414 (29.71%), Postives = 165/414 (39.86%), Query Frame = 0
Query:  394 ELDHGAEAAKVFGQLLSLNVFGFLGPQALGEGRAVCRSWRDKCTWDCCWSNLCVSRWRLCSEERHAEVW---------------RPAPPD---------------ELVAVVSPPE----PPPSWRQVYGRLHRELRVPTGAF-----------RPVHL-----IIGRNVQQGVAVWIALSRRSNGMTGRSVMGTK-AFRSTEVIELRAVIQRVD---EGPAIAVHPR-------------------------AFRVRRINTNKGFGNHVTTGGXXXXASGSSFSNTANATTAEVFPSISDRDGRFAPTVAINTGLADGASDQASAGCGMGAAGGVGRQREVTMVALHEYATVDFFIKTAGCPTERDFLRLPTCVDVGVSTA-ISRREAGVDVRGGHGPIVLPVVLNEREHEPTA 727
            +L   + AA VFG   +L +  FL   +L   R  CR WR +C WDC W+  C +RWRL  ++R  E W               R   P+               +L      PE    PP SWR+VY  LHRELR+P GA             P  L     +IGR    G  VW+AL RRSNGMT RSV+    A R+ EV+ELR V+Q +     G A A  PR                         +F V  I   +     V  GG    A GS                     GR+A  +     L + A+ +++AG  +G    V  Q+   ++ L + A    F++  GC TE +FL     +D+GV      R + G         IVL V L   +   TA
Sbjct:  282 QLSADSAAAAVFGASCALPIHAFLDAASLEAARRACRDWRARCAWDCTWARQCAARWRLRGQDRALEAWQARFSRVSNAQRLRRRDCAPETRAGALLRAGERCHAQLEQYYRDPEALAAPPVSWREVYCALHRELRLPDGALCVSAAAXXXXXAPHALGRGEDVIGRAAGGGACVWVALCRRSNGMTARSVVTPSGAMRAAEVVELRIVLQNIGVGARGTATAYLPRQPLRVATRGSSDGXXXXXXXXXXASSFFVEAIGDPRLSSQLVRKGGLGGRACGS---------------------GRWARWLDQPLRLYESATFRSAAGRSLGDE--VRGQQVDQLLRLRKVAKRGAFLEVPGCATEAEFLDQAVSLDLGVELGGCDRNDGGAAAAARREGIVLHVGLRGTDAAATA 672          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig883.16739.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JYB8_9PHAE6.380e-12247.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LR75_ECTSI1.360e-12047.45Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YLV5_9STRA1.000e-2629.71BHLH domain-containing protein n=1 Tax=Tribonema m... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.1280.50coord: 399..495
e-value: 1.0E-6
score: 30.6
IPR036047F-box-like domain superfamilySUPERFAMILY81383F-box domaincoord: 409..493

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig883contigH-paniculata_contig883:8891..15752 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig883.16739.1mRNA_H-paniculata_contig883.16739.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig883 6137..15766 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig883.16739.1 ID=prot_H-paniculata_contig883.16739.1|Name=mRNA_H-paniculata_contig883.16739.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=751bp
MSLEYQKSSLCELLTTHLDIEFLPWTQHHTSQLPNTAIRKRECVLVMEQA
QDDDDAWRRAFADSSGLFDNCNLFGTFDALSTSDSNASTVSSSSSSSSSS
SSAPAPATTTTTTTMTTTTTKSTTPTTLFPPDCPPTPLPLSGALPNMASN
MPEPLQLVTSPSPPLDYIPHMSPSSQPQQQQPRHAILPMPGITIRQPKVD
MPMVQQNSTAAREWLSTSRAARPVAAAAAGVESMSPHAAAAAAAIFRAAN
ADDFQGGASQQRGVDSCARKRERAKLLRQQMNDGLDSLHEALVEISASGA
NPAAAATTGLIPTRGPRRAAVVACSSSLVRDLIATCITLRAENVALNERL
VQPASPAKSVDVAAAAAEVVGGTGGDKNARNGPQAVVGGGNVVELDHGAE
AAKVFGQLLSLNVFGFLGPQALGEGRAVCRSWRDKCTWDCCWSNLCVSRW
RLCSEERHAEVWRPAPPDELVAVVSPPEPPPSWRQVYGRLHRELRVPTGA
FRPVHLIIGRNVQQGVAVWIALSRRSNGMTGRSVMGTKAFRSTEVIELRA
VIQRVDEGPAIAVHPRAFRVRRINTNKGFGNHVTTGGGGGSASGSSFSNT
ANATTAEVFPSISDRDGRFAPTVAINTGLADGASDQASAGCGMGAAGGVG
RQREVTMVALHEYATVDFFIKTAGCPTERDFLRLPTCVDVGVSTAISRRE
AGVDVRGGHGPIVLPVVLNEREHEPTALGGAHIDFFSKPWRPLKRRGSLT
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036047F-box-like_dom_sf