|
|
Homology
BLAST of mRNA_H-paniculata_contig883.16739.1 vs. uniprot
Match: A0A6H5JYB8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYB8_9PHAE) HSP 1 Score: 387 bits (993), Expect = 4.800e-115 Identity = 250/531 (47.08%), Postives = 301/531 (56.69%), Query Frame = 3
Query: 783 GASQQRGVDSCARKRERAKLLRQQMNDGLDSLHEALVEISASGANPAAAATTGLIPTRGPRRAAVVACSSSLVRDLIATCITLRAENVALNERLVQPASPAKSVDVAAAAAEVV-------------------------GGTGGDKNARNGPQAVVGGGNVVELDHGAEAAKVFGQLLSLNVFGFLGPQALGEGRAVCRSWRDKCTWDCCWSNLCVSRWRLCSEERHAEVWRPAPPDELV--------------AVVSPPEPPPSWRQVYGRLHRELRVPTGAFRPVHLIIGRNVQQGVAVWIALSRRSNGMTGRSVM--GTKAFRSTEVIELRAVIQRVDEGPAIAVHPRAFRVRRINTNKGFGNHVTTGGXXXXASGSSFSNTANATTAEV---FPSISDRDGRFAPTVAINTGLADG----------------------ASDQASAGCGMGAAGGVGRQREVTMVALHEYATVDFFIKTAGCPTERDFLRLPTCVDVGVSTAISRREAGVDVRGGHGPIVLPVVLNER 2177
GA QRG +S +RKR+RAKLLRQQMNDGLD+LHEALVEIS SGAN +A+A T LIPTRGPRRAAVVACS+ LVRDLI+TCI LR + +L RL + G G D +G A G A +AKVFGQLLSL+VFGFLGPQ+L E V R WRDKCTWDC WS LCVSRWRL E+RHAEVWR PD+ +V+SPP PPP+W+ +YGRLHR++ P+G F P H++IGR+VQ+GVAVWIAL+RRSNGMTGRSVM G+ R+TEVIELRAV+QRV+EGPA+ VHP AF+VRR++ + + G XXXX FP +S RF+P IN G + + S+ G AA +AL+EYA VDFFI+ AGCPTE DFLRL CVDV VS A + + G G +L V L ER
Sbjct: 41 GAPNQRGGESFSRKRDRAKLLRQQMNDGLDNLHEALVEISTSGANLSASAATSLIPTRGPRRAAVVACSAGLVRDLISTCIALRKDKASLLARLAEALRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSHGRDSGGASGAVATAGV---------ASSAKVFGQLLSLSVFGFLGPQSLEEASKVSRDWRDKCTWDCNWSTLCVSRWRLGPEQRHAEVWRV--PDDADGTGKXXXXXKGVARSVLSPPAPPPTWQSIYGRLHRDVHAPSGTFCPSHMVIGRSVQEGVAVWIALNRRSNGMTGRSVMTQGSTGLRTTEVIELRAVVQRVEEGPAVRVHPHAFKVRRVSGLRALLKDHSDGXXXXXXXXXXXXXXXXXXXXXXXGFFPPVSQGKDRFSPKFTINRGAVESXXXXXXXXXXXXXXXXXXXXXXGAGVRSSWSGTAAAAASLAAEATPPLALYEYAVVDFFIEAAGCPTEADFLRLEACVDVAVSGAAASAAGATPIVGSVGVPLLSVGLTER 560
BLAST of mRNA_H-paniculata_contig883.16739.1 vs. uniprot
Match: D8LR75_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR75_ECTSI) HSP 1 Score: 387 bits (995), Expect = 1.080e-113 Identity = 251/529 (47.45%), Postives = 303/529 (57.28%), Query Frame = 3
Query: 783 GASQQRGVDSCARKRERAKLLRQQMNDGLDSLHEALVEISASGANPAAAATTGLIPTRGPRRAAVVACSSSLVRDLIATCITLRAENVALNERLVQPASPAKSVDVAAAAAEVV-------------------------------GGTGGDKNARNGPQAVVGGGNVVELDHGAEAAKVFGQLLSLNVFGFLGPQALGEGRAVCRSWRDKCTWDCCWSNLCVSRWRLCSEERHAEVWRPAPPDELV----------AVVSPPEPPPSWRQVYGRLHRELRVPTGAFRPVHLIIGRNVQQGVAVWIALSRRSNGMTGRSVM--GTKAFRSTEVIELRAVIQRVDEGPAIAVHPRAFRVRRINTNKGFGNHVTTGGXXXXASGSSFSNTANATTAEVFPSISDRDGRFAPTVAINTGLADG---------------------ASDQASAGCGMGAAGGVGRQREVTMVALHEYATVDFFIKTAGCPTERDFLRLPTCVDVGVSTAISRREAGVDVRGGHGPIVLPVVLNER 2177
GA QRG +S +RKR+RAKLLRQQMNDGLD+LHEALVEIS SGAN +A+A T LIPTRGPRRAAVVACS+ LVRDLI+TCI LR + +L+ R + + GG GG G +AVVG A +AKVFGQLLSL+VFGFLGPQ+L E V R WRDKCTWDC WS LCVSRWRL E+RHAEVWR PD+ + VSPP PPP+W+ +YGRLH ++ P+G F P H++IGR+VQ+GVAVWIAL+RRSNGMTGRSVM G+ R+TEVIELRAV+QRV+EGPA+ VHP AF+VRR++ + N + XXX FP +S + RF+P IN G A+ + S+ G AA +AL+EYA VDFFI+ AGCPTE DFLRL CVDV VS A + V G +L V L ER
Sbjct: 186 GAPNQRGGESFSRKRDRAKLLRQQMNDGLDNLHEALVEISTSGANLSASAATSLIPTRGPRRAAVVACSAGLVRDLISTCIALRKDKASLSARFAEALRQLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSHGLDSGGAGG------GAEAVVGV---------ASSAKVFGQLLSLSVFGFLGPQSLEEASKVSREWRDKCTWDCNWSTLCVSRWRLGPEQRHAEVWRV--PDDADGKGKXXXVARSAVSPPAPPPTWQSIYGRLHGDVHAPSGTFCPSHMVIGRSVQEGVAVWIALTRRSNGMTGRSVMTQGSTGLRTTEVIELRAVVQRVEEGPAVRVHPHAFKVRRVSGLRALLNDHS---GXXXXXXXXXXXXXXXXXXGFFPPVSQGEDRFSPKFTINRGAAESXXXXXXXXXXXXXXXXXXRGAGAGVRSSWSGTAAATASPAAEATPPLALYEYAAVDFFIEAAGCPTEADFLRLEACVDVAVSGATASAAGATPVVGSVCVPLLSVGLTER 694
BLAST of mRNA_H-paniculata_contig883.16739.1 vs. uniprot
Match: A0A835YLV5_9STRA (BHLH domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLV5_9STRA) HSP 1 Score: 127 bits (319), Expect = 4.620e-26 Identity = 123/414 (29.71%), Postives = 165/414 (39.86%), Query Frame = 3
Query: 1194 ELDHGAEAAKVFGQLLSLNVFGFLGPQALGEGRAVCRSWRDKCTWDCCWSNLCVSRWRLCSEERHAEVW---------------RPAPPD---------------ELVAVVSPPE----PPPSWRQVYGRLHRELRVPTGAF-----------RPVHL-----IIGRNVQQGVAVWIALSRRSNGMTGRSVMGTK-AFRSTEVIELRAVIQRVD---EGPAIAVHPR-------------------------AFRVRRINTNKGFGNHVTTGGXXXXASGSSFSNTANATTAEVFPSISDRDGRFAPTVAINTGLADGASDQASAGCGMGAAGGVGRQREVTMVALHEYATVDFFIKTAGCPTERDFLRLPTCVDVGVSTA-ISRREAGVDVRGGHGPIVLPVVLNEREHEPTA 2195
+L + AA VFG +L + FL +L R CR WR +C WDC W+ C +RWRL ++R E W R P+ +L PE PP SWR+VY LHRELR+P GA P L +IGR G VW+AL RRSNGMT RSV+ A R+ EV+ELR V+Q + G A A PR +F V I + V GG A GS GR+A + L + A+ +++AG +G V Q+ ++ L + A F++ GC TE +FL +D+GV R + G IVL V L + TA
Sbjct: 282 QLSADSAAAAVFGASCALPIHAFLDAASLEAARRACRDWRARCAWDCTWARQCAARWRLRGQDRALEAWQARFSRVSNAQRLRRRDCAPETRAGALLRAGERCHAQLEQYYRDPEALAAPPVSWREVYCALHRELRLPDGALCVSAAAXXXXXAPHALGRGEDVIGRAAGGGACVWVALCRRSNGMTARSVVTPSGAMRAAEVVELRIVLQNIGVGARGTATAYLPRQPLRVATRGSSDGXXXXXXXXXXASSFFVEAIGDPRLSSQLVRKGGLGGRACGS---------------------GRWARWLDQPLRLYESATFRSAAGRSLGDE--VRGQQVDQLLRLRKVAKRGAFLEVPGCATEAEFLDQAVSLDLGVELGGCDRNDGGAAAAARREGIVLHVGLRGTDAAATA 672
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | F-box domain |
| Ec32 ortholog | Ec-06_004090.1 |
| Exons | 6 |
| Model size | 5021 |
| Cds size | 2253 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig883.16739.1 >prot_H-paniculata_contig883.16739.1 ID=prot_H-paniculata_contig883.16739.1|Name=mRNA_H-paniculata_contig883.16739.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=751bp
MSLEYQKSSLCELLTTHLDIEFLPWTQHHTSQLPNTAIRKRECVLVMEQA
QDDDDAWRRAFADSSGLFDNCNLFGTFDALSTSDSNASTVSSSSSSSSSS
SSAPAPATTTTTTTMTTTTTKSTTPTTLFPPDCPPTPLPLSGALPNMASN
MPEPLQLVTSPSPPLDYIPHMSPSSQPQQQQPRHAILPMPGITIRQPKVD
MPMVQQNSTAAREWLSTSRAARPVAAAAAGVESMSPHAAAAAAAIFRAAN
ADDFQGGASQQRGVDSCARKRERAKLLRQQMNDGLDSLHEALVEISASGA
NPAAAATTGLIPTRGPRRAAVVACSSSLVRDLIATCITLRAENVALNERL
VQPASPAKSVDVAAAAAEVVGGTGGDKNARNGPQAVVGGGNVVELDHGAE
AAKVFGQLLSLNVFGFLGPQALGEGRAVCRSWRDKCTWDCCWSNLCVSRW
RLCSEERHAEVWRPAPPDELVAVVSPPEPPPSWRQVYGRLHRELRVPTGA
FRPVHLIIGRNVQQGVAVWIALSRRSNGMTGRSVMGTKAFRSTEVIELRA
VIQRVDEGPAIAVHPRAFRVRRINTNKGFGNHVTTGGGGGSASGSSFSNT
ANATTAEVFPSISDRDGRFAPTVAINTGLADGASDQASAGCGMGAAGGVG
RQREVTMVALHEYATVDFFIKTAGCPTERDFLRLPTCVDVGVSTAISRRE
AGVDVRGGHGPIVLPVVLNEREHEPTALGGAHIDFFSKPWRPLKRRGSLT
* back to topmRNA from alignment at H-paniculata_contig883:6137..15766- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig883.16739.1 ID=mRNA_H-paniculata_contig883.16739.1|Name=mRNA_H-paniculata_contig883.16739.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=9630bp|location=Sequence derived from alignment at H-paniculata_contig883:6137..15766- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GCCCTGTTCACAACATGTCCCTGGAGTATCAGAAGTCTTCATTATGTGAG
CTTCTTACTACACACTTAGACATTGAGTTCCTCCCTTGGACACAACATCA
CACATCTCAACTCCCAAATACAGCAATCAGGAAACGAGAGTGTGTGCTGG
TGATGGAGCAAGCGCAGGACGACGACGACGCCTGGCGTAGAGCGTTCGCG
GACTCGTCAGGTCTGTTTGACAACTGCAACTTGTTTGGAACGTTCGACGC
TCTAAGCACCAGCGATAGCAACGCTTCGACTGTATCATCATCATCATCAT
CATCATCATCATCATCATCAGCACCAGCACCAGCAACAACAACAACAACA
ACAACAATGACAACAACGACAACAAAATCAACAACACCTACAACACTTTT
CCCGCCCGATTGCCCGCCTACCCCGCTTCCGTTAAGCGGTGCCCTCCCAA
ACATGGCAAGTAATATGCCGGAGCCACTGCAGCTCGTGACCTCCCCTTCC
CCACCTTTGGACTATATCCCTCACATGTCACCATCCTCGCAACCCCAGCA
ACAGCAGCCTCGGCACGCAATTCTACCCATGCCGGGAATAACAATTCGGC
AGCCCAAAGTCGATATGCCCATGGTACAGCAAAATTCGACAGCTGCTCGA
GAGTGGCTTTCGACCTCGCGCGCGGCACGACCCGTGGCGGCAGCGGCAGC
GGGAGTAGAGTCTATGAGTCCTCATGCAGCCGCTGCAGCGGCTGCAATTT
TTCGCGCTGCTAACGCGGACGATTTTCAAGTGAGTGTCGTTGTTGTCAGG
ACGGTTTGATTATTGTTGTTGTTGGTGTGGGGGTGAGAACTGCTTGGTCT
CACACAATGAAAGCATTTCCACCTTGAGTTCAGCTGTTTTGCAACGCGTT
TTGTGTTTTCAATGAGAGAGATATATCATGGGTTCAATACTGCTGCCTTA
TTTATGTGCTGCCCTGCTTCTACTGCTGGTGGTGGTGGTGGTGCTGCTGC
TGTCGCTACTCCTACCAGTGACGGAATGCCTTGTCAGTCACTGCTTGTTC
CGATTTACGCCTCGTAATTTTTTTTGTCGTCCACGTGTCCGTAGCGTCGA
CGGGTAGCCTGCAGCTACACGAAAACACCTGAGGCTTTGCCTCTGTCAAC
CCTTGTTTATCAATCGCGGACTTTTGGGTCGAGGAATTAGCACCGGACAA
GCAGTCTTTGGAATGCCGAAAAAATACATAACGACGAAGGCGTATGTAAT
ACCTTCCGTCTGATGACAACCATAACTCAGATATGCCCTGGTCTGGTTGC
TAATGTTTCAGCGTGTACTGTCCAGCTGTTGGAACATTTTTGTCATTCGT
AAGTAGCCTCTTGTACGTGAGTTGAAATGTGCAGTGATATTTAGAGATGG
TAAGTATCTTCATGTGGTGCACGGTATTCTAATCGGTACCGCTGCTGCTG
CTGCTGCCATGACAGATATTTAGCCTAGTCCGTTTGTTACATCATTGGCG
TGCCGTTTTGTCCCGTCGATGTGTGTGTGTGTGTGTTTTTTTTTCTTATT
GTGTCGTAAGCGATCTATTTCTCGGTAAATATTCCCATTTAGTCGTCCAC
AACACGTAACATTCTCACTTTTTCATCCTCTGCCACTATATTCATCGCAA
CATGAGATACACAGACAACTGCAGTAGACGAAAACACGCAAAGCTGATGA
GAACAAATTCTCAATCTTTTGTAGGTACCCGGTTGCTCTTATCTATCCTC
CCCCCCAAGACCGAAAAAAAAAAACTTTCCCGAAGGGAGGTAAAAGAAAC
TGTGCCGCCAAAAACTACTCAAACCCAATAGCTCCGACCAACCATTATTC
AGCCTAACAATTAGTTCATCATGTCGCGTTTGTTTCTGTTGCCTATTTAC
CACTAAACTTACTGTTGAACACACGAGGGGGGCGCTTCACAGCAACGAGG
CGTGGACAGCTGTGCGCGAAAGCGCGAGCGAGCCAAACTGTTGCGGCAGC
AGATGAACGACGGCCTAGACAGCCTGCACGAGGTATACAAAGTGTGTGTA
TGTGTATCGTGATGATTGCTGTTGCGGGGGAGGTCTTGTGGGGAATTTTG
TCTTCGAGCGAATGTGATAGTTATTCAGTGGCTAACTCTAGCTATTGCAC
CGAAACGCTGTGCAAATTTTGGTGGGACTAGCTATAGAGGCCCAAAAATT
TGGATATTCTCGTTTTTGTTAGTCATTGATCGTTGTGTATTTGTGGCTTG
TTATCCACTTCGCTGTAACGATAAACGCTTCCGAAAATTGAATATTCGCG
CTGGCTCGGCGGGCGTTGAAAACCACAACGGCACGCGGCATGCCGAAACG
AAGACCCAATCAACCTCACAGAAAATGTGTGCGGTGCAGTAGCAAGTAGC
AAATTTTTAGTTGCCACGAATCATCCACCCTGTTGTACTTCCTCAATTCG
CGTAAACGCCGAGTACGATATCATAATGTTAGCAGTGGGAAAAGCCCAAA
CATCCATCCACCCTCAACATGGGAACAAACGCTTACCCCTTGCGGTGCTT
AGTTTAGTCGGCAAACTTTTCCAGCTTACAAATAGCATCACTTCTTAACC
CCTCCACTCAAAGTTAATTTATTCTCCTGGTAAGGCAATTAGTTAGCTTA
CTACTCCTTTGGTTTGCGCCCCCCGCCCCTGCCAGGCTCTCGTGGAAATC
AGCGCAAGCGGCGCCAACCCCGCAGCGGCAGCAACCACTGGCCTAATTCC
CACCAGGGGACCCCGGCGTGCGGCCGTCGTAGCGTGCTCATCCAGCTTGG
TGCGCGACCTCATCGCCACATGCATCACGCTTCGCGCTGAAAACGTTGCC
TTGAATGAGCGCCTCGTACAGCCGGCGTCGCCCGCGAAGTCGGTCGACGT
TGCTGCGGCGGCGGCGGAGGTTGTGGGGGGTACCGGTGGCGACAAGAACG
CCAGGAATGGCCCGCAGGCGGTGGTTGGGGGCGGAAATGTAGTCGAGCTG
GATCACGGGGCTGAAGCGGCCAAGGTGTTCGGCCAGCTTTTGTCTCTCAA
TGTGTTTGGCTTCTTGGGACCGCAGGCCCTGGGGGAAGGCAGGGCGGTTT
GTCGTTCTTGGCGCGACAAATGCACCTGGGATTGCTGGTGAGAGTTGCTA
TTTTAACGACTTTCTAATGTTTTTTTTTGTCGTCGTGCTGTGTTTGGTTG
TTTGACTCCCCTCCTCCCCATGTAGGTGCCAAAGGTGTCTCATGTTCTGC
TGCTGCTGCTGCTGCTGCTATGTTGTCACTGTCTAAAGTTGTGTTGTTTT
TTATTATGTGTCTAATGTGTTTTCGGGGTAACCTTTGCACCCGGTGACGG
TGTGCGGCACGTTTGGTACGGTATTACGTGGGTGCGTTTTTGGGGGGGTG
CTAGAGTAAGGAAAACCGTTCGATGCGCCTCTCATGCTACTGGGACCTTG
ACGTACCACATGACCACCTATTTGTAACCCAAAATTAACGTTGAACTCGG
TCCTAGTTTAGAGAAGCTACAAGGACGTTGAGGACCGGCGCAGGCGTTTT
GCTAGATTCCGAGAAGCGTTCAAGGACATGGCGATGAGAGCAACACACAG
ATCCGAATGTAATTCACCGTGGGCCAAGCATGAAGTAGACTTTGGTCGAA
GCATGTACATCGCATGCGTTATTTTGGTCGAGCGTTGAGTTTGGAGTATG
TGGTTTGTGCAAATTCTGGGCAACTTGAACAAAGGAGGTGTTGGATTATG
CATGAACGTGTTTTTTTGGTGGTTTGCTGTCTCTGACGACTACCGTGCCG
GAAATTGCGATTGGCATATTTTGTCTCCCCGTTAGATACAACCACGCCAT
TTCGATTCCAACCGTTATACTCGACGACAGGTCTTCGATTTCCACTGGGC
TATTTGTGGACTGGTGCAACCTCCACCCTTTTGGTCTGATGGTTGATGTG
TTCGGTGATATTTAGCGAAAAGTACCAGAGTATATTTGAAAATCTCGGTC
GTACAGCAGTGCTAGAAACAGCTTGTGGTCGATCTTCTTCTCGCCTTGCT
GATGGTACCCCTCTGCCCATACAATGACATGCGTCGTTCCCCTCCCCCAT
TTAATATTAGAGTGGCTGGATGATGCATTTGAGGTACGTTCTTGTAAATA
CCTGAGTAGGTTTCACCGCGCATTCCCCGAACCGCCCGGCCGCCCATCCA
CCACAGATTAATTACGTCTCTTGTCTATGACGTGACTTGAACCCTGGAAG
CGGTGCCAAACGTTGCACCGGGTGGTATGATCTGTGGTGCAAACCATCCT
CGGAAAACTGTAACGTTGTCGTCTCTACCGGCGGCATTGCCAGACACTAC
GGAACACATGCCTACTGCGCACAGTGTAACACAATCCCGATTCGGACTCT
ACCTCGACAAACAGTAGCACCAAACGCATGGCGCATGAAGCTGACCCGCA
TACAGCGTTTTTCTATCTCCAACGTTGACTCCAACCCCCCCTTTCGACCC
CCAACTTCCTCTGCCACCGTCACTGATACCCCGCACCGTTAATGCTCCTC
TTCGCGGGCAAACCCATCATGGAAACCCCACATTTTCTCTACTTAATAAC
CCCTTCTGCCCTCGACAGCTGGAGTAACCTCTGCGTGTCGCGTTGGAGGT
TGTGCTCGGAAGAACGGCACGCAGAGGTGTGGCGACCCGCCCCGCCAGAT
GAACTGGTCGCCGTCGTCTCTCCGCCGGAGCCTCCGCCATCGTGGCGGCA
GGTGTACGGCCGTCTTCACAGGGAACTGCGCGTGCCCACGGGTGCTTTCC
GCCCTGTGCATCTCATCATCGGCAGAAATGTTCAACAGGTGGGTGCTAGA
TAGGAAGGGTGAGAGGGATGGAAGCCCCAGCGCGCGGGGGGAGGTATTCA
TGATACCGTGGTCATTAAAAAAAATAGTCAAAACGTGACAAAATATCAAA
TTATGTAATATGGAAATATGGCGATAACCGCACCACAAACAAGGAGACAT
GCTTCGACATCTTCCAAGTCGCTGGATTACTTTGTTATTATCGACACAAA
CTTGACAAGCTTTGTTAGCGGGGTGTACTGCATGACGTACTCATCGATGA
GTTTATGTGCTGATTATGAGGGTATTTGTGTATTGGCGTTTTCTTCATAG
CTCTGTTCGGCCATTGATCAAGTGTATCACGAGGGTTATAAAAAAAAAAA
GGATTTTCGGTCTAACTTTTTTCTTTCATCTGTTGGGGTCGTCGCCCGAG
TGTTTGTCTTACTGTGCGCAAGGTTCATGAGGCAAGTTTGCGCTCTCTCG
TGCGTATCTTTGGATGCGTAATTGGAGGTGTGTTTCTTGGTTCTTGAAAC
TTGAGACGACCAAGCCTTTTCACTCAGACCTTCACCGAGAATTCCACCTC
CCACAACGCCCGCCGCCGTCGCTGTCGCTGTCACTGCGGCCGAGTGTCTG
TCTTACCTGTCGCTGTGCGTTCCGCAGGGTGTCGCTGTCTGGATTGCACT
GAGTCGCAGGAGTAACGGCATGACCGGCCGCTCGGTTATGGGCACCAAGG
CGTTCCGCTCGACTGAGGTAAGAAGTGCAAACCTACATGAACATACGATG
CCTGGAAGTTACGAGCAGTGTTATCAAATCCCTGCCGCATCGGGGAATAC
GTTGGATGGAGACAAACTAAATCCTATGGCCAAAAAAAGAAATTCGATTT
TGGGTTTTGCTTCTCGGAGCTCGTCACTCGTCTGTGCTGCATTCGTCATT
GTTCCGGCAGCCGATGCAACGCAGAAGTCCGTATAGTGTCCCGCCCCATC
CCCTGTAGGTGCGCTTTTATTACTCGCCCCTAAGCAGTAGTACAGTCTCC
GCTGTTGGAACGTGCGAAGGCGCATGTCTGGCACACGTCGTAGTGAAATG
TTTTCAAATCAGTCATGGAACGCAGGGGCGCAGGAATTATGATATAATTC
GTTTGGGAAATATTTGCCCATTTCCATATCTTGAGGTGTCCTTGCTGGCT
AGAAATCCCACCCCGCATTATTGTGAATGATGTGTTACTGATCCCCGACC
GGGTGGTTGTCTGTCCATTGTCATTGATTTTAGTATGGCCAAAAACAAAG
AAACAAATTGTGGTCCACACGATCCTGGGGTACTCTACTGTGACGTTGTA
GCGCATGACCCAACATCCTATCACATCACTCCACTGACGATATGTGCCCT
TCAAAACACATATTTGGAAAAAAAACCCATCCGAACGCCGCCGGTGGTTT
GACAGGTTATTGAGCTACGGGCCGTGATTCAGCGCGTGGACGAAGGCCCT
GCCATCGCGGTCCACCCCCGTGCTTTCCGTGTCCGGCGTATCAACACTAA
CAAGGGGTTTGGCAACCATGTGACCACAGGTGGCGGCGGTGGTAGTGCGT
CAGGCTCCTCGTTCTCCAACACTGCCAATGCCACCACGGCCGAGGTATTC
CCATCCATATCCGACAGAGACGGTCGCTTCGCCCCGACGGTCGCGATCAA
CACGGGTCTCGCTGACGGCGCAAGCGACCAAGCCAGCGCGGGCTGTGGCA
TGGGAGCGGCGGGCGGGGTGGGGCGGCAGAGGGAGGTGACCATGGTGGCC
CTGCACGAGTACGCTACGGTCGACTTCTTCATCAAAACCGCCGGCTGTCC
CACCGAGAGGGACTTCCTCCGCCTACCTACGTGCGTCGACGTAGGGGTTT
CTACTGCGATAAGCAGGAGAGAGGCGGGCGTGGACGTGAGGGGTGGACAC
GGGCCGATCGTGCTGCCCGTTGTGTTGAACGAACGAGAGCATGAGCCCAC
AGCTCTCGGCGGCGCGCACATCGACTTCTTCAGCAAGCCGTGGCGTCCGC
TCAAGCGCAGAGGCTCGTTGACATGAGCTGAGTTTCGGTTGATGAACATT
TTCGGCGATGTGGACGGTGGGACGGTGAGTGTGTATGGGAAGGTAACCCG
CTGTCAAGGCGTTGTTATTTGGCGTTTTTGGAATGCCCAAACAGTGATCG
ACTTGCAAGTCGAACGCAAGTTCATCTAGCGCCTTCGGGGTAAAATTTGT
CTTGGAAGGAAGAGAGGGATATTGGGAGGGGCTAGGGAGTTTACTGCAAA
TGTATATAATTTTTTATGTTGTCCTTTTTTATGGTTTCGGTTTTTGTATA
TACAATACGTACTGGTGCCAATTGACTGTTGGCCAAACATCGGGGGATTG
TGATACGTCATGGTGGAAGTTCGTGACTGTTAAGTTATAGAAAAACAGGC
GGGGCGTAATAGCTCTTGCACAGTTAATTAACTGTCTACGGGGCCGTCGT
GTCGCAGATTGGATATTGTGTTTCGATGAGGGGTGGAAGGTGATCGCACT
GCCAACACACGATATATTTATGTATCAATATACCTCCCGGTCGCTTTACA
TGGTTGACGCACGTACATGCGTGTTTACATGGTACCTGTACTTCTTACGT
TTCACCCTAGAAGATGACGGCTGAACCTGGTCGCTCGATGCCACATTTGC
TGAACTTAGATTGAGATATGGAAAAAATCGTTTGTCCGAAATGAAATCGG
TGTTTGATATTTTCTATGTTAAACACCCGTTTGTGTCTGTGCGTAACCTC
TGTGCTCTTGAGTGCACCGTAGGATCGCTTTGTGGTGTGGAGTTTTTTTG
TTGTGGTTTTTGCCTCTTGAGTGATACCCCAAAACACAGATACTGTACCA
ACATGGAGGTAGACGTACCAGTAAAGCCATGGCCATGACCATGCAGCCCG
CGACTTGTCCGTGACCCACTGTGCACCGGTTCGGATCGCTCGCAAATAAG
TAGTGATATAGGTCCATCTCGAGCATAAGTTGTTCGCGGCGGTGGCAAGA
CCAAAAGCGAGGTCTACCATTGTTGGCCGGTTGCTGCTGTATTGTGACCT
TGATGCACGATTCATACGTACGTGTGGTTGCTTTCCCTATTTTTTGTTGT
AACGGTTTGCGTTTAACAGTATCCAAACATTGAGGTGTTGGGAGTTCGGG
TTGTTACCATGGCATGTAGCGTAAGGTTTTATGCACATGGTAGCTTTTTG
TGCAGTTATTTTTAAGGCCAACGACTATCTCGCAGCGAAGGTGCCACCCA
CGTAGTAGCAATGCGTGCAGTCAGGCAGAGTGCGAGACTCCGGTGTTTCT
GGATACGTCTTTATAAATATTTTTCAGGCAAGTTGTTTTGATGGCTCGAG
GCCGGAAACTTCACTGGTCCGGTGCAAGTCTTGCTGGGTGGCGGGCAACC
TGTCGCTCTCAGATATATGGATATTTCGTAAACAGGGAAAGTGGCAAGGA
AATTCCGTTTCCACATGTTCTGTTCTGTTTACAGACTTTGTCGTGTGCTA
ACTGCATCGGGTACATGGCGTTGGGGGTCCACCATGATGAGTGTAGGCAC
AACGAAGGCGGTGTTCAAGAGCGCATAGACGTTTTCCGCGTGTTCGTATT
CTGCTCTAGTTACTGCTCATAGTGGTGTTTTGTGTATGATGCTGGCCGTT
TTTCAGTCTTCGCAATTTCTTGGATCTAGAGGCAACAGACGAAAGCTTTC
CCTGTGTGCTTTGACAAGCAAGGCATGGTAACCTTCAATGTGAGACTGAG
GGCTGGCTCGGACGATAGATAGCTGATCTCTTCTGGTTCAGCTACCACTT
AGTAGTTGTCAAGAGGAGCTTTGCGCGCGAAACACGATGTATTTGCGCGC
GCTTATCTGTTTGTGTATGCGTTTTTTTTTTATAGTGAGGGTTCCGATCA
GGAGTTAGTTTTGTGGCGTAGATGTTTCTCGGTTCTGAAGGATGCAAAAG
GCAGGTCACGTAGGTGCCTGTCCACTCACACGATCTTATGTTGAAAACAC
CGTTTTACTAGATAAATAAACTTTTCTCTTTCTCGATACGGCTATGTGGT
GGTCATGATGACGATCCTCTCGGTGCTGTTGTTGCCATTATCTATCGAAG
TGTGTTTTACAAAGTGTCATGTGTCACGTGATACGAACACTTCGAAGGGG
GTCTGAGTAAGGTACACTGGTGTATTATAGCCGTTATTGACTTGGTTGCT
GTCGGATGCAACCTCAAATAAGAAAGCTGTCTCGTGATGGGTGTTTCCAA
CCCATTGCTGCGGTCACGAAGTCGACTTGCAAGCGGGAAGAGGGGGAAGG
AGGTGATGACTCCAGCCTCGGACAGGGCGGGCAGTAAACAATGTGAATGA
AAGGGTGCAATGTGGACAGTCTCCGTTGTTCCGTTGAAGGAGGTGGCGAT
AGTGTCACACCAGACCCTGCTCCTTGAACGTTCCACGTATAGTCCTAGAT
CCGGCTGGATATTCGTCGGCCGCTAGCTGTGGTTGTAGAGGTTATTGACA
GCCCAAAGAACCTTGTTGAGTATATCCGTTTATCGTACGACAATTTAGTC
TCTGTCGCTCCTCTTGCTTTTTTGTATAGCTCGTTTTCTCTCGGTCACAT
CACGTGGGATAGTGCTGCTGTGTTCTTAACGTCGATTTACTCCTTGTCCA
TGTTGCTTCAGGCCCACTTTTTTTGTGCGGTGATTCAATTCTTTTCAAGG
ACCATTCCTACCAGGTGCAATAGTATATTGATGAGATTCAGAGTGGAACT
TGACAACCAGAGTGCAATCGTAAAGACGCG back to topCoding sequence (CDS) from alignment at H-paniculata_contig883:6137..15766- >mRNA_H-paniculata_contig883.16739.1 ID=mRNA_H-paniculata_contig883.16739.1|Name=mRNA_H-paniculata_contig883.16739.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=4506bp|location=Sequence derived from alignment at H-paniculata_contig883:6137..15766- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTCCCTGGAGTATCAGAAGTCTTCATTATGTGAGCTTCTTACTACACA
CTTAGACATTGAGTTCCTCCCTTGGACACAACATCACACATCTCAACTCC
CAAATACAGCAATCAGGAAACGAGAGTGTGTGCTGGTGATGGAGCAAGCG
CAGGACGACGACGACGCCTGGCGTAGAGCGTTCGCGGACTCGTCAGGTCT
GTTTGACAACTGCAACTTGTTTGGAACGTTCGACGCTCTAAGCACCAGCG
ATAGCAACGCTTCGACTGTATCATCATCATCATCATCATCATCATCATCA
TCATCAGCACCAGCACCAGCAACAACAACAACAACAACAACAATGACAAC
AACGACAACAAAATCAACAACACCTACAACACTTTTCCCGCCCGATTGCC
CGCCTACCCCGCTTCCGTTAAGCGGTGCCCTCCCAAACATGGCAAGTAAT
ATGCCGGAGCCACTGCAGCTCGTGACCTCCCCTTCCCCACCTTTGGACTA
TATCCCTCACATGTCACCATCCTCGCAACCCCAGCAACAGCAGCCTCGGC
ACGCAATTCTACCCATGCCGGGAATAACAATTCGGCAGCCCAAAGTCGAT
ATGCCCATGGTACAGCAAAATTCGACAGCTGCTCGAGAGTGGCTTTCGAC
CTCGCGCGCGGCACGACCCGTGGCGGCAGCGGCAGCGGGAGTAGAGTCTA
TGAGTCCTCATGCAGCCGCTGCAGCGGCTGCAATTTTTCGCGCTGCTAAC
GCGGACGATTTTCAAATGTCCCTGGAGTATCAGAAGTCTTCATTATGTGA
GCTTCTTACTACACACTTAGACATTGAGTTCCTCCCTTGGACACAACATC
ACACATCTCAACTCCCAAATACAGCAATCAGGAAACGAGAGTGTGTGCTG
GTGATGGAGCAAGCGCAGGACGACGACGACGCCTGGCGTAGAGCGTTCGC
GGACTCGTCAGGTCTGTTTGACAACTGCAACTTGTTTGGAACGTTCGACG
CTCTAAGCACCAGCGATAGCAACGCTTCGACTGTATCATCATCATCATCA
TCATCATCATCATCATCATCAGCACCAGCACCAGCAACAACAACAACAAC
AACAACAATGACAACAACGACAACAAAATCAACAACACCTACAACACTTT
TCCCGCCCGATTGCCCGCCTACCCCGCTTCCGTTAAGCGGTGCCCTCCCA
AACATGGCAAGTAATATGCCGGAGCCACTGCAGCTCGTGACCTCCCCTTC
CCCACCTTTGGACTATATCCCTCACATGTCACCATCCTCGCAACCCCAGC
AACAGCAGCCTCGGCACGCAATTCTACCCATGCCGGGAATAACAATTCGG
CAGCCCAAAGTCGATATGCCCATGGTACAGCAAAATTCGACAGCTGCTCG
AGAGTGGCTTTCGACCTCGCGCGCGGCACGACCCGTGGCGGCAGCGGCAG
CGGGAGTAGAGTCTATGAGTCCTCATGCAGCCGCTGCAGCGGCTGCAATT
TTTCGCGCTGCTAACGCGGACGATTTTCAAGGGGGCGCTTCACAGCAACG
AGGCGTGGACAGCTGTGCGCGAAAGCGCGAGCGAGCCAAACTGTTGCGGC
AGCAGATGAACGACGGCCTAGACAGCCTGCACGAGGGGGGCGCTTCACAG
CAACGAGGCGTGGACAGCTGTGCGCGAAAGCGCGAGCGAGCCAAACTGTT
GCGGCAGCAGATGAACGACGGCCTAGACAGCCTGCACGAGGCTCTCGTGG
AAATCAGCGCAAGCGGCGCCAACCCCGCAGCGGCAGCAACCACTGGCCTA
ATTCCCACCAGGGGACCCCGGCGTGCGGCCGTCGTAGCGTGCTCATCCAG
CTTGGTGCGCGACCTCATCGCCACATGCATCACGCTTCGCGCTGAAAACG
TTGCCTTGAATGAGCGCCTCGTACAGCCGGCGTCGCCCGCGAAGTCGGTC
GACGTTGCTGCGGCGGCGGCGGAGGTTGTGGGGGGTACCGGTGGCGACAA
GAACGCCAGGAATGGCCCGCAGGCGGTGGTTGGGGGCGGAAATGTAGTCG
AGCTGGATCACGGGGCTGAAGCGGCCAAGGTGTTCGGCCAGCTTTTGTCT
CTCAATGTGTTTGGCTTCTTGGGACCGCAGGCCCTGGGGGAAGGCAGGGC
GGTTTGTCGTTCTTGGCGCGACAAATGCACCTGGGATTGCTGGCTCTCGT
GGAAATCAGCGCAAGCGGCGCCAACCCCGCAGCGGCAGCAACCACTGGCC
TAATTCCCACCAGGGGACCCCGGCGTGCGGCCGTCGTAGCGTGCTCATCC
AGCTTGGTGCGCGACCTCATCGCCACATGCATCACGCTTCGCGCTGAAAA
CGTTGCCTTGAATGAGCGCCTCGTACAGCCGGCGTCGCCCGCGAAGTCGG
TCGACGTTGCTGCGGCGGCGGCGGAGGTTGTGGGGGGTACCGGTGGCGAC
AAGAACGCCAGGAATGGCCCGCAGGCGGTGGTTGGGGGCGGAAATGTAGT
CGAGCTGGATCACGGGGCTGAAGCGGCCAAGGTGTTCGGCCAGCTTTTGT
CTCTCAATGTGTTTGGCTTCTTGGGACCGCAGGCCCTGGGGGAAGGCAGG
GCGGTTTGTCGTTCTTGGCGCGACAAATGCACCTGGGATTGCTGCTGGAG
TAACCTCTGCGTGTCGCGTTGGAGGTTGTGCTCGGAAGAACGGCACGCAG
AGGTGTGGCGACCCGCCCCGCCAGATGAACTGGTCGCCGTCGTCTCTCCG
CCGGAGCCTCCGCCATCGTGGCGGCAGGTGTACGGCCGTCTTCACAGGGA
ACTGCGCGTGCCCACGGGTGCTTTCCGCCCTGTGCATCTCATCATCGGCA
GAAATGTTCAACAGCTGGAGTAACCTCTGCGTGTCGCGTTGGAGGTTGTG
CTCGGAAGAACGGCACGCAGAGGTGTGGCGACCCGCCCCGCCAGATGAAC
TGGTCGCCGTCGTCTCTCCGCCGGAGCCTCCGCCATCGTGGCGGCAGGTG
TACGGCCGTCTTCACAGGGAACTGCGCGTGCCCACGGGTGCTTTCCGCCC
TGTGCATCTCATCATCGGCAGAAATGTTCAACAGGGTGTCGCTGTCTGGA
TTGCACTGAGTCGCAGGAGTAACGGCATGACCGGCCGCTCGGTTATGGGC
ACCAAGGCGTTCCGCTCGACTGAGGGTGTCGCTGTCTGGATTGCACTGAG
TCGCAGGAGTAACGGCATGACCGGCCGCTCGGTTATGGGCACCAAGGCGT
TCCGCTCGACTGAGGTTATTGAGCTACGGGCCGTGATTCAGCGCGTGGAC
GAAGGCCCTGCCATCGCGGTCCACCCCCGTGCTTTCCGTGTCCGGCGTAT
CAACACTAACAAGGGGTTTGGCAACCATGTGACCACAGGTGGCGGCGGTG
GTAGTGCGTCAGGCTCCTCGTTCTCCAACACTGCCAATGCCACCACGGCC
GAGGTATTCCCATCCATATCCGACAGAGACGGTCGCTTCGCCCCGACGGT
CGCGATCAACACGGGTCTCGCTGACGGCGCAAGCGACCAAGCCAGCGCGG
GCTGTGGCATGGGAGCGGCGGGCGGGGTGGGGCGGCAGAGGGAGGTGACC
ATGGTGGCCCTGCACGAGTACGCTACGGTCGACTTCTTCATCAAAACCGC
CGGCTGTCCCACCGAGAGGGACTTCCTCCGCCTACCTACGTGCGTCGACG
TAGGGGTTTCTACTGCGATAAGCAGGAGAGAGGCGGGCGTGGACGTGAGG
GGTGGACACGGGCCGATCGTGCTGCCCGTTGTGTTGAACGAACGAGAGCA
TGAGCCCACAGCTCTCGGCGGCGCGCACATCGACTTCTTCAGCAAGCCGT
GGCGTCCGCTCAAGCGCAGAGGCTCGTTGACATGAGTTATTGAGCTACGG
GCCGTGATTCAGCGCGTGGACGAAGGCCCTGCCATCGCGGTCCACCCCCG
TGCTTTCCGTGTCCGGCGTATCAACACTAACAAGGGGTTTGGCAACCATG
TGACCACAGGTGGCGGCGGTGGTAGTGCGTCAGGCTCCTCGTTCTCCAAC
ACTGCCAATGCCACCACGGCCGAGGTATTCCCATCCATATCCGACAGAGA
CGGTCGCTTCGCCCCGACGGTCGCGATCAACACGGGTCTCGCTGACGGCG
CAAGCGACCAAGCCAGCGCGGGCTGTGGCATGGGAGCGGCGGGCGGGGTG
GGGCGGCAGAGGGAGGTGACCATGGTGGCCCTGCACGAGTACGCTACGGT
CGACTTCTTCATCAAAACCGCCGGCTGTCCCACCGAGAGGGACTTCCTCC
GCCTACCTACGTGCGTCGACGTAGGGGTTTCTACTGCGATAAGCAGGAGA
GAGGCGGGCGTGGACGTGAGGGGTGGACACGGGCCGATCGTGCTGCCCGT
TGTGTTGAACGAACGAGAGCATGAGCCCACAGCTCTCGGCGGCGCGCACA
TCGACTTCTTCAGCAAGCCGTGGCGTCCGCTCAAGCGCAGAGGCTCGTTG
ACATGA back to top
|