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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 1799 |
| Cds size | 1791 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig882.16734.1 >prot_H-paniculata_contig882.16734.1 ID=prot_H-paniculata_contig882.16734.1|Name=mRNA_H-paniculata_contig882.16734.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=597bp
MNPCHNNVVAMQEQGQDSEMEELPERAPENAGSRDVGLLAGVGGVTEAGL
VAEKESRDTCSAHRADRRVVQPANQGLLLGTQHGISISSSNSQGGSGGGS
STPTTTAVNPEPAASVPENRPETDFQSRSSLLLPLSLTIMPEHTAESSSA
FSVLVSPVSPQPRSGEGSSARTEGVEEGGKGNGKVVWGDEDGKAASVDRH
QRVAEPISEPEGPPRTRGESDVEVTPHNHSREQESLLLSRSCGPIEADGA
RGVNGVLDHDVDARADVSNRMDVGEEQEGDGGVAEAPLVDHPARDGVATM
EPSKKTPLPPSPPASSPSSFGAGDTMPISTTASGVAQGIGGQAESVLQYT
PSLQLMEVDREEAAEERNGGEKRAGDSATTKDEARRPPRPFHHPWPQPKE
VASALAPHPFSVVSAESSAGTEKMTVSPSSLEKAAALESQASGAEDASKL
SSTLSSVYERSASLAAAEAGSSTGAGGGARDENAKVGGVSKGMAKSLLLT
DESKTRRHEYVLGKQESTHDSTPEVDCDTSESGDMLSTNHADLPADKLPP
EGQLKGTCQSESESPAPETGNAIQADDTFFFASSGVGTYSNSDFFRG back to topmRNA from alignment at H-paniculata_contig882:16301..19459- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig882.16734.1 ID=mRNA_H-paniculata_contig882.16734.1|Name=mRNA_H-paniculata_contig882.16734.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3159bp|location=Sequence derived from alignment at H-paniculata_contig882:16301..19459- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGCGGCATGAACCCCTGCCATAACAATGTCGTAGCGATGCAGGAACAAGG
CCAAGACTCGGAAATGGAAGAACTCCCTGAGCGTGCTCCTGAAAATGCGG
GGAGTCGGGATGTGGGGTTGCTTGCTGGTGTCGGCGGTGTCACGGAAGCG
GGGCTTGTTGCTGAGAAGGAATCACGGGACACTTGTTCTGCACATCGAGC
TGACCGGCGAGTTGTGCAGCCAGCAAATCAGGGTCTGCTACTTGGTACTC
AACATGGTGAGTATTTTTTCGCCCCTATTTTTTATTAGCTCTTAGTTGGG
GGTGTCTTCGAGCCCGTGAGATAAAGGCGACACGAACGTTGTCGTAGGCG
AGGAGTCTGAAAAGCCTGTGCCGGTCGGGAGGGGACTGGCTGGTTGACGG
GCTGGCCTTCCTCGTTGTTTTGTTTGGTCGCTGCAATCAAGCAGCACCAG
CAGCACTTTATTTGCAAGTCTCGTCTTTGATTTGATCGGTAAGGTCAGTT
ATTTAGGGCTGCAGTCAGTATTCTGTTCTTTTGTTTAATCAAGTGTATTT
CTGGGTACATCGACCACTTTTTCAAAAATGCAGAGCCCACCACCAATTTG
TCGGTTACGAGCTGTATGTGACTCTGCGTCGTGTACGTACCGGTAGCGAA
CGAGTTGCGTCCAGAACATGTGCCCCAGGTGTCTTGTATTAATGTTGCTG
GCCTTCGCATATGACTGACGGCTGTCGGCGATATCACTTCATGTTGGAAA
GCATTATTACCACAGTCAAAACCCAAACTAAATGCGGTGCCGGCCAGCCA
TTGTGGCTCCACACACTTACATCTCCGATCCTCCCCTGGACGACCTCAAA
GACGCTGCGGATTTTAAACAGTACACTTCAAATGTCCGAGGGGACATTTG
CCGTTCGTTTCATTAATACAGTTACAGCACAGTACAGCAGGGTCGGTACT
ACGTCAGCATGAGATCCATTCCTGCACAACGGCATTTATACTCATGCCAT
TTCTGTGGATATATTTTCTTCGCATTGCGTCTACTCCAGTGCTACTGTGT
GAAGGGCGAATCTCTGTCTAGTTACCTTCCTTCTGGGCTCTTTGTCAGGG
GTCCCGAGTCTCGAGACATACATACATCTATTTTTAAACTGGGGAGGGAA
GAACGAAGACCAGACGCCACTGGTCCATGGTATACTCCACCGCTTGACTT
CAACCCGACTTTGTTCTTGATCTAGCTTGTGTTTGCTGCAGCAGTCTGTG
CCGCAGTCCACATCATGTAAGCTTCTCTTCGGTCGCTTGGCACTTTTGGG
CTATTCCGATCGAGAGGTTGGGTATGCGCGGGCCCGTTTGAGTCACTTGT
TAAATACATGAAGGAAAACATCAACCGGCACATCTCCAACTAATCACACC
CCTCACACCCATCTCTCTAATTGACCAGGCATCTCAATATCGTCATCCAA
CAGTCAAGGTGGTAGCGGCGGCGGTAGCAGCACACCTACAACGACAGCGG
TGAACCCTGAACCAGCGGCGTCGGTTCCAGAAAACCGCCCGGAAACCGAT
TTTCAGTCCCGATCATCGCTGCTGCTGCCGTTGTCCCTAACGATTATGCC
TGAACACACGGCCGAATCGTCGTCTGCCTTTTCTGTCCTAGTGTCACCCG
TGTCGCCACAACCGAGAAGTGGCGAAGGTTCTTCAGCGAGGACGGAAGGC
GTCGAGGAGGGAGGGAAAGGCAACGGCAAAGTCGTCTGGGGCGACGAAGA
CGGTAAAGCTGCTAGTGTGGATAGGCATCAGCGGGTCGCCGAACCAATAT
CGGAGCCCGAGGGACCGCCACGGACCCGGGGCGAATCGGATGTAGAAGTC
ACGCCGCACAACCATAGTCGCGAGCAGGAGTCGTTGCTGTTGTCGCGTAG
CTGCGGTCCCATCGAAGCTGATGGAGCTAGAGGGGTTAACGGGGTTCTTG
ACCACGATGTGGATGCAAGAGCTGACGTTAGTAATAGAATGGACGTGGGG
GAGGAGCAGGAGGGAGATGGCGGTGTAGCAGGTGAGGATCTTGCACCATC
CCTGCGCCTGTGACCGCTCTTTCACTGATGTGCTTGTTGTCGAGATTTGT
AGCCTTGTTTATTTCCTCTCGATGATTACTTCGTTCTATGGTGGGTGGTT
GTGGTATCGTCCGAAGTTCTTGGTTGTCCCGATTCCGTCTTCGCACCCCA
TACGTGCTTCTTCTCTTGCAGAAGCTCCATTAGTCGACCATCCCGCACGC
GACGGAGTAGCGACTATGGAGCCCTCGAAGAAGACACCACTGCCGCCGTC
GCCTCCAGCATCGTCGCCATCGAGCTTTGGAGCAGGCGACACGATGCCTA
TTTCAACAACAGCATCGGGGGTTGCCCAAGGAATCGGCGGACAGGCGGAA
TCGGTGTTGCAGTACACACCATCGCTGCAGCTCATGGAAGTTGATAGAGA
GGAAGCAGCAGAGGAGAGGAATGGGGGAGAGAAACGTGCGGGGGATTCGG
CGACAACGAAGGATGAGGCACGGAGACCACCGCGCCCGTTCCACCACCCT
TGGCCTCAGCCGAAAGAAGTCGCCTCTGCTTTAGCCCCCCACCCCTTTTC
TGTCGTTTCTGCTGAGTCCAGTGCTGGGACGGAGAAGATGACTGTATCGC
CGTCTTCCTTGGAGAAAGCCGCTGCACTGGAATCACAGGCATCTGGGGCA
GAAGACGCGTCAAAGCTGTCGTCGACCCTCTCTTCTGTCTACGAGCGCAG
CGCCTCCCTTGCTGCTGCGGAAGCGGGAAGCTCCACTGGAGCTGGCGGTG
GAGCTAGAGATGAAAATGCCAAGGTCGGGGGTGTATCAAAAGGGATGGCC
AAGAGCTTACTATTGACAGATGAATCGAAAACCAGGCGACACGAATACGT
GTTAGGCAAGCAGGAATCTACGCACGACTCCACGCCCGAGGTTGATTGTG
ATACTTCGGAGTCAGGGGATATGTTGAGCACAAACCATGCCGATTTACCA
GCGGATAAATTGCCGCCCGAGGGCCAGCTGAAGGGGACGTGCCAGAGTGA
GTCGGAAAGCCCGGCACCAGAAACGGGGAATGCAATACAGGCAGACGACA
CATTTTTTTTTGCTTCCAGCGGTGTCGGGACGTACAGCAATAGCGACTTT
TTCCGTGGT back to topCoding sequence (CDS) from alignment at H-paniculata_contig882:16301..19459- >mRNA_H-paniculata_contig882.16734.1 ID=mRNA_H-paniculata_contig882.16734.1|Name=mRNA_H-paniculata_contig882.16734.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3582bp|location=Sequence derived from alignment at H-paniculata_contig882:16301..19459- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAACCCCTGCCATAACAATGTCGTAGCGATGCAGGAACAAGGCCAAGA
CTCGGAAATGGAAGAACTCCCTGAGCGTGCTCCTGAAAATGCGGGGAGTC
GGGATGTGGGGTTGCTTGCTGGTGTCGGCGGTGTCACGGAAGCGGGGCTT
GTTGCTGAGAAGGAATCACGGGACACTTGTTCTGCACATCGAGCTGACCG
GCGAGTTGTGCAGCCAGCAAATCAGGGTCTGCTACTTGGTACTCAACATG
ATGAACCCCTGCCATAACAATGTCGTAGCGATGCAGGAACAAGGCCAAGA
CTCGGAAATGGAAGAACTCCCTGAGCGTGCTCCTGAAAATGCGGGGAGTC
GGGATGTGGGGTTGCTTGCTGGTGTCGGCGGTGTCACGGAAGCGGGGCTT
GTTGCTGAGAAGGAATCACGGGACACTTGTTCTGCACATCGAGCTGACCG
GCGAGTTGTGCAGCCAGCAAATCAGGGTCTGCTACTTGGTACTCAACATG
GCATCTCAATATCGTCATCCAACAGTCAAGGTGGTAGCGGCGGCGGTAGC
AGCACACCTACAACGACAGCGGTGAACCCTGAACCAGCGGCGTCGGTTCC
AGAAAACCGCCCGGAAACCGATTTTCAGTCCCGATCATCGCTGCTGCTGC
CGTTGTCCCTAACGATTATGCCTGAACACACGGCCGAATCGTCGTCTGCC
TTTTCTGTCCTAGTGTCACCCGTGTCGCCACAACCGAGAAGTGGCGAAGG
TTCTTCAGCGAGGACGGAAGGCGTCGAGGAGGGAGGGAAAGGCAACGGCA
AAGTCGTCTGGGGCGACGAAGACGGTAAAGCTGCTAGTGTGGATAGGCAT
CAGCGGGTCGCCGAACCAATATCGGAGCCCGAGGGACCGCCACGGACCCG
GGGCGAATCGGATGTAGAAGTCACGCCGCACAACCATAGTCGCGAGCAGG
AGTCGTTGCTGTTGTCGCGTAGCTGCGGTCCCATCGAAGCTGATGGAGCT
AGAGGGGTTAACGGGGTTCTTGACCACGATGTGGATGCAAGAGCTGACGT
TAGTAATAGAATGGACGTGGGGGAGGAGCAGGAGGGAGATGGCGGTGTAG
CAGGCATCTCAATATCGTCATCCAACAGTCAAGGTGGTAGCGGCGGCGGT
AGCAGCACACCTACAACGACAGCGGTGAACCCTGAACCAGCGGCGTCGGT
TCCAGAAAACCGCCCGGAAACCGATTTTCAGTCCCGATCATCGCTGCTGC
TGCCGTTGTCCCTAACGATTATGCCTGAACACACGGCCGAATCGTCGTCT
GCCTTTTCTGTCCTAGTGTCACCCGTGTCGCCACAACCGAGAAGTGGCGA
AGGTTCTTCAGCGAGGACGGAAGGCGTCGAGGAGGGAGGGAAAGGCAACG
GCAAAGTCGTCTGGGGCGACGAAGACGGTAAAGCTGCTAGTGTGGATAGG
CATCAGCGGGTCGCCGAACCAATATCGGAGCCCGAGGGACCGCCACGGAC
CCGGGGCGAATCGGATGTAGAAGTCACGCCGCACAACCATAGTCGCGAGC
AGGAGTCGTTGCTGTTGTCGCGTAGCTGCGGTCCCATCGAAGCTGATGGA
GCTAGAGGGGTTAACGGGGTTCTTGACCACGATGTGGATGCAAGAGCTGA
CGTTAGTAATAGAATGGACGTGGGGGAGGAGCAGGAGGGAGATGGCGGTG
TAGCAGAAGCTCCATTAGTCGACCATCCCGCACGCGACGGAGTAGCGACT
ATGGAGCCCTCGAAGAAGACACCACTGCCGCCGTCGCCTCCAGCATCGTC
GCCATCGAGCTTTGGAGCAGGCGACACGATGCCTATTTCAACAACAGCAT
CGGGGGTTGCCCAAGGAATCGGCGGACAGGCGGAATCGGTGTTGCAGTAC
ACACCATCGCTGCAGCTCATGGAAGTTGATAGAGAGGAAGCAGCAGAGGA
GAGGAATGGGGGAGAGAAACGTGCGGGGGATTCGGCGACAACGAAGGATG
AGGCACGGAGACCACCGCGCCCGTTCCACCACCCTTGGCCTCAGCCGAAA
GAAGTCGCCTCTGCTTTAGCCCCCCACCCCTTTTCTGTCGTTTCTGCTGA
GTCCAGTGCTGGGACGGAGAAGATGACTGTATCGCCGTCTTCCTTGGAGA
AAGCCGCTGCACTGGAATCACAGGCATCTGGGGCAGAAGACGCGTCAAAG
CTGTCGTCGACCCTCTCTTCTGTCTACGAGCGCAGCGCCTCCCTTGCTGC
TGCGGAAGCGGGAAGCTCCACTGGAGCTGGCGGTGGAGCTAGAGATGAAA
ATGCCAAGGTCGGGGGTGTATCAAAAGGGATGGCCAAGAGCTTACTATTG
ACAGATGAATCGAAAACCAGGCGACACGAATACGTGTTAGGCAAGCAGGA
ATCTACGCACGACTCCACGCCCGAGGTTGATTGTGATACTTCGGAGTCAG
GGGATATGTTGAGCACAAACCATGCCGATTTACCAGCGGATAAATTGCCG
CCCGAGGGCCAGCTGAAGGGGACGTGCCAGAGTGAGTCGGAAAGCCCGGC
ACCAGAAACGGGGAATGCAATACAGGCAGACGACACATTTTTTTTTGCTT
CCAGCGGTGTCGGGACGTACAGCAATAGCGACTTTTTCCGTGGTAAGCTC
CATTAGTCGACCATCCCGCACGCGACGGAGTAGCGACTATGGAGCCCTCG
AAGAAGACACCACTGCCGCCGTCGCCTCCAGCATCGTCGCCATCGAGCTT
TGGAGCAGGCGACACGATGCCTATTTCAACAACAGCATCGGGGGTTGCCC
AAGGAATCGGCGGACAGGCGGAATCGGTGTTGCAGTACACACCATCGCTG
CAGCTCATGGAAGTTGATAGAGAGGAAGCAGCAGAGGAGAGGAATGGGGG
AGAGAAACGTGCGGGGGATTCGGCGACAACGAAGGATGAGGCACGGAGAC
CACCGCGCCCGTTCCACCACCCTTGGCCTCAGCCGAAAGAAGTCGCCTCT
GCTTTAGCCCCCCACCCCTTTTCTGTCGTTTCTGCTGAGTCCAGTGCTGG
GACGGAGAAGATGACTGTATCGCCGTCTTCCTTGGAGAAAGCCGCTGCAC
TGGAATCACAGGCATCTGGGGCAGAAGACGCGTCAAAGCTGTCGTCGACC
CTCTCTTCTGTCTACGAGCGCAGCGCCTCCCTTGCTGCTGCGGAAGCGGG
AAGCTCCACTGGAGCTGGCGGTGGAGCTAGAGATGAAAATGCCAAGGTCG
GGGGTGTATCAAAAGGGATGGCCAAGAGCTTACTATTGACAGATGAATCG
AAAACCAGGCGACACGAATACGTGTTAGGCAAGCAGGAATCTACGCACGA
CTCCACGCCCGAGGTTGATTGTGATACTTCGGAGTCAGGGGATATGTTGA
GCACAAACCATGCCGATTTACCAGCGGATAAATTGCCGCCCGAGGGCCAG
CTGAAGGGGACGTGCCAGAGTGAGTCGGAAAGCCCGGCACCAGAAACGGG
GAATGCAATACAGGCAGACGACACATTTTTTTTTGCTTCCAGCGGTGTCG
GGACGTACAGCAATAGCGACTTTTTCCGTGGT back to top
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