prot_H-paniculata_contig8812.16727.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig8812.16727.1
Unique Name	prot_H-paniculata_contig8812.16727.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	104

Homology

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BLAST of mRNA_H-paniculata_contig8812.16727.1 vs. uniprot
Match: A0A8F0JYD6_9PHAE (Ribosomal protein L21 n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0JYD6_9PHAE)

HSP 1 Score: 163 bits (413), Expect = 1.900e-50
Identity = 78/103 (75.73%), Postives = 92/103 (89.32%), Query Frame = 0

Query:    1 MEYAIIEASGRQFWVERKKFFELNRLLINIGSTILIQRILFINKTDSIKIGQPCLSDSLVEGVISKHFLGSKILVFKMKPKNKYRRKIGHGQNLTKLFVNQIQ 103
            MEYA+IEASGRQFWVE KKF E NRLLINIGST+++QRILF+NKT +I IGQP L ++L++G+ISKHFLG KILVFKMKPK KYRRKIGH Q LT+LF+NQI+
Sbjct:    1 MEYAVIEASGRQFWVEPKKFIEFNRLLINIGSTLIMQRILFMNKTGAINIGQPYLPNTLIKGIISKHFLGPKILVFKMKPKKKYRRKIGHRQKLTRLFINQIE 103

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BLAST of mRNA_H-paniculata_contig8812.16727.1 vs. uniprot
Match: A0A0R6M4T4_UNDPI (50S ribosomal protein L21, chloroplastic n=25 Tax=Phaeophyceae TaxID=2870 RepID=A0A0R6M4T4_UNDPI)

HSP 1 Score: 146 bits (369), Expect = 9.700e-44
Identity = 70/103 (67.96%), Postives = 87/103 (84.47%), Query Frame = 0

Query:    1 MEYAIIEASGRQFWVERKKFFELNRLLINIGSTILIQRILFINKTDSIKIGQPCLSDSLVEGVISKHFLGSKILVFKMKPKNKYRRKIGHGQNLTKLFVNQIQ 103
            MEYAIIEASGRQFWVE KKF E NRL++ IGSTILI+R+LF+ +  +  IGQP L++ +V+GV+SKHFLG KILVFKMKPK KYR+KIGH Q LT+L +N+I+
Sbjct:    1 MEYAIIEASGRQFWVEPKKFIEFNRLILKIGSTILIRRVLFVKQKKNTLIGQPYLNNVVVKGVVSKHFLGPKILVFKMKPKKKYRKKIGHRQKLTRLLINKIE 103

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BLAST of mRNA_H-paniculata_contig8812.16727.1 vs. uniprot
Match: A0A8F0F7S8_9PHAE (Ribosomal protein L21 n=2 Tax=Laminariales TaxID=2886 RepID=A0A8F0F7S8_9PHAE)

HSP 1 Score: 145 bits (366), Expect = 2.780e-43
Identity = 71/102 (69.61%), Postives = 83/102 (81.37%), Query Frame = 0

Query:    1 MEYAIIEASGRQFWVERKKFFELNRLLINIGSTILIQRILFINKTDSIKIGQPCLSDSLVEGVISKHFLGSKILVFKMKPKNKYRRKIGHGQNLTKLFVNQI 102
            MEYAIIEASGRQFWVE KKF E N L+I IGSTILI+R+LF     +  IGQP L+D +V+G+ISKHFLG K+LVFKMKPK KYR+KIGH Q LT+L +NQI
Sbjct:    1 MEYAIIEASGRQFWVEPKKFIEFNXLIIKIGSTILIRRVLFFKNETNTFIGQPYLNDVVVKGIISKHFLGPKVLVFKMKPKKKYRKKIGHRQKLTRLLINQI 102

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BLAST of mRNA_H-paniculata_contig8812.16727.1 vs. uniprot
Match: A0A2R4QQ35_9PHAE (50S ribosomal protein L21 n=3 Tax=Fucaceae TaxID=3010 RepID=A0A2R4QQ35_9PHAE)

HSP 1 Score: 144 bits (362), Expect = 1.240e-42
Identity = 69/103 (66.99%), Postives = 83/103 (80.58%), Query Frame = 0

Query:    1 MEYAIIEASGRQFWVERKKFFELNRLLINIGSTILIQRILFINKTDSIKIGQPCLSDSLVEGVISKHFLGSKILVFKMKPKNKYRRKIGHGQNLTKLFVNQIQ 103
            MEYAIIEASGRQFWVE KKF E NRL + +GSTI+I+R+LF+ K     IGQP L + L+ G+ISKHFLG K+LVFKMKPK KYR+KIGH Q LT+L +NQI+
Sbjct:    1 MEYAIIEASGRQFWVEPKKFIEFNRLPLKVGSTIIIKRVLFVKKKADTFIGQPYLKNILLTGIISKHFLGPKVLVFKMKPKKKYRKKIGHRQKLTRLLINQIE 103

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BLAST of mRNA_H-paniculata_contig8812.16727.1 vs. uniprot
Match: A0A141BSP2_9PHAE (50S ribosomal protein L21, chloroplastic n=14 Tax=Sargassum TaxID=3015 RepID=A0A141BSP2_9PHAE)

HSP 1 Score: 143 bits (360), Expect = 2.420e-42
Identity = 70/103 (67.96%), Postives = 86/103 (83.50%), Query Frame = 0

Query:    1 MEYAIIEASGRQFWVERKKFFELNRLLINIGSTILIQRILFINKTDSIKIGQPCLSDSLVEGVISKHFLGSKILVFKMKPKNKYRRKIGHGQNLTKLFVNQIQ 103
            MEYAIIEASGRQFWVE  KF ELNRL + IGSTILI+RILF+ K  +  IGQP L++ +++G+ISKHFLGSKILVFKMKPK KYR+K+GH Q LT+L ++ I+
Sbjct:    1 MEYAIIEASGRQFWVEPNKFIELNRLPLRIGSTILIKRILFVKKKTNTFIGQPYLTNIVLKGIISKHFLGSKILVFKMKPKKKYRKKMGHRQKLTRLLISSIE 103

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BLAST of mRNA_H-paniculata_contig8812.16727.1 vs. uniprot
Match: A0A8F0JZ48_9PHAE (Ribosomal protein L21 n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0JZ48_9PHAE)

HSP 1 Score: 142 bits (357), Expect = 6.540e-42
Identity = 67/102 (65.69%), Postives = 84/102 (82.35%), Query Frame = 0

Query:    1 MEYAIIEASGRQFWVERKKFFELNRLLINIGSTILIQRILFINKTDSIKIGQPCLSDSLVEGVISKHFLGSKILVFKMKPKNKYRRKIGHGQNLTKLFVNQI 102
            MEYAIIEASGRQFWVE KKF E NRL++ IGST+LI+R+LF+ K  +  IG+P L   +++G+ISKHFLG KI+VFKMKPK KYR+KIGH Q LT+L +N+I
Sbjct:    1 MEYAIIEASGRQFWVEPKKFIEFNRLILKIGSTVLIRRVLFVKKEANTLIGRPYLEGIVLKGIISKHFLGPKIIVFKMKPKKKYRKKIGHRQKLTRLLINKI 102

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BLAST of mRNA_H-paniculata_contig8812.16727.1 vs. uniprot
Match: A0A1I9LVJ3_9PHAE (50S ribosomal protein L21, chloroplastic n=10 Tax=Ectocarpales TaxID=2877 RepID=A0A1I9LVJ3_9PHAE)

HSP 1 Score: 141 bits (356), Expect = 9.280e-42
Identity = 70/103 (67.96%), Postives = 83/103 (80.58%), Query Frame = 0

Query:    1 MEYAIIEASGRQFWVERKKFFELNRLLINIGSTILIQRILFINKTDSIKIGQPCLSDSLVEGVISKHFLGSKILVFKMKPKNKYRRKIGHGQNLTKLFVNQIQ 103
            MEYAIIEASGRQFWVE KKF E NRL++ IGSTILI+RILF     +  IGQP L + LV+G ISKHFLG KILVFKMKPK KYR+KIGH Q +T+L +++I+
Sbjct:    1 MEYAIIEASGRQFWVEPKKFIEFNRLILKIGSTILIRRILFAKNKTTTHIGQPYLKNILVKGKISKHFLGPKILVFKMKPKKKYRKKIGHRQKMTRLLIHKIE 103

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BLAST of mRNA_H-paniculata_contig8812.16727.1 vs. uniprot
Match: A0A8E5BG87_9PHAE (Ribosomal protein L21 n=1 Tax=Phaeophyceae sp. TaxID=2249243 RepID=A0A8E5BG87_9PHAE)

HSP 1 Score: 135 bits (341), Expect = 1.790e-39
Identity = 63/103 (61.17%), Postives = 83/103 (80.58%), Query Frame = 0

Query:    1 MEYAIIEASGRQFWVERKKFFELNRLLINIGSTILIQRILFINKTDSIKIGQPCLSDSLVEGVISKHFLGSKILVFKMKPKNKYRRKIGHGQNLTKLFVNQIQ 103
            M+YAI+EASGRQFWVE  KFFELNRL   +GST++ +R+LF+NK     IGQP L + +V+G+I+KHFLG KIL+FKMKPK KYR+K+GH Q LT++ +N I+
Sbjct:    1 MKYAILEASGRQFWVEPTKFFELNRLSRKVGSTLIFKRVLFLNKKGVCLIGQPYLMNQVVKGIITKHFLGIKILIFKMKPKKKYRKKLGHRQKLTRVLINIIE 103

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BLAST of mRNA_H-paniculata_contig8812.16727.1 vs. uniprot
Match: A0A8E5XRL0_9PHAE (50S ribosomal protein L21, chloroplastic n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E5XRL0_9PHAE)

HSP 1 Score: 135 bits (340), Expect = 2.700e-39
Identity = 64/103 (62.14%), Postives = 84/103 (81.55%), Query Frame = 0

Query:    1 MEYAIIEASGRQFWVERKKFFELNRLLINIGSTILIQRILFINKTDSIKIGQPCLSDSLVEGVISKHFLGSKILVFKMKPKNKYRRKIGHGQNLTKLFVNQIQ 103
            M+YAIIEASGRQFWVE +KF ELNRL +NIG+ ILI+R+LF    +  +IGQP ++   ++GV+SKHFLG K+LVFKMKPK KYR++IGH Q LT+L ++QI+
Sbjct:    1 MKYAIIEASGRQFWVEPEKFVELNRLPVNIGTKILIKRVLFAKTGEKTRIGQPYINHIEIKGVVSKHFLGPKLLVFKMKPKKKYRKRIGHRQKLTRLLISQIK 103

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BLAST of mRNA_H-paniculata_contig8812.16727.1 vs. uniprot
Match: A0A2I4Q2A5_9PHAE (50S ribosomal protein L21, chloroplastic n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A2I4Q2A5_9PHAE)

HSP 1 Score: 134 bits (338), Expect = 9.980e-39
Identity = 69/120 (57.50%), Postives = 88/120 (73.33%), Query Frame = 0

Query:    1 MEYAIIEASGRQFWVERKKFFELNRLLINIGSTILIQRILFINKT-------------DSIK-----IGQPCLSDSLVEGVISKHFLGSKILVFKMKPKNKYRRKIGHGQNLTKLFVNQI 102
            MEYAIIEASGRQFW+E KKF E NRLL++IGSTI+++RILF+ KT               IK     +GQP +++  ++G+ISKHFLG KILVFKMKPK KYR+K GH Q LT+LF+++I
Sbjct:    1 MEYAIIEASGRQFWIEPKKFVEFNRLLLHIGSTIILKRILFVKKTIVKDVEVPSTSLIKRIKKTTTFVGQPYITNIFIKGIISKHFLGPKILVFKMKPKKKYRKKFGHRQKLTRLFISEI 120

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig8812.16727.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig8812.16727.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A8F0JYD6_9PHAE	1.900e-50	75.73	Ribosomal protein L21 n=1 Tax=Protohalopteris sp. ...	[more]
A0A0R6M4T4_UNDPI	9.700e-44	67.96	50S ribosomal protein L21, chloroplastic n=25 Tax=...	[more]
A0A8F0F7S8_9PHAE	2.780e-43	69.61	Ribosomal protein L21 n=2 Tax=Laminariales TaxID=2...	[more]
A0A2R4QQ35_9PHAE	1.240e-42	66.99	50S ribosomal protein L21 n=3 Tax=Fucaceae TaxID=3...	[more]
A0A141BSP2_9PHAE	2.420e-42	67.96	50S ribosomal protein L21, chloroplastic n=14 Tax=...	[more]
A0A8F0JZ48_9PHAE	6.540e-42	65.69	Ribosomal protein L21 n=1 Tax=Chorda asiatica TaxI...	[more]
A0A1I9LVJ3_9PHAE	9.280e-42	67.96	50S ribosomal protein L21, chloroplastic n=10 Tax=...	[more]
A0A8E5BG87_9PHAE	1.790e-39	61.17	Ribosomal protein L21 n=1 Tax=Phaeophyceae sp. Tax...	[more]
A0A8E5XRL0_9PHAE	2.700e-39	62.14	50S ribosomal protein L21, chloroplastic n=1 Tax=I...	[more]
A0A2I4Q2A5_9PHAE	9.980e-39	57.50	50S ribosomal protein L21, chloroplastic n=1 Tax=D...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001787	Ribosomal protein L21	TIGRFAM	TIGR00061	TIGR00061	coord: 3..103 e-value: 7.2E-25 score: 85.3
IPR001787	Ribosomal protein L21	HAMAP	MF_01363	Ribosomal_L21	coord: 2..103 score: 17.587
IPR028909	Ribosomal protein L21-like	PFAM	PF00829	Ribosomal_L21p	coord: 3..102 e-value: 1.0E-25 score: 89.9
IPR028909	Ribosomal protein L21-like	PANTHER	PTHR21349	50S RIBOSOMAL PROTEIN L21	coord: 2..103
None	No IPR available	PANTHER	PTHR21349:SF3	50S RIBOSOMAL PROTEIN L21	coord: 2..103
IPR036164	L21-like superfamily	SUPERFAMILY	141091	L21p-like	coord: 3..102

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig8812	contig	H-paniculata_contig8812:2901..3212 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig8812.16727.1	mRNA_H-paniculata_contig8812.16727.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig8812 2901..3212 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig8812.16727.1 ID=prot_H-paniculata_contig8812.16727.1|Name=mRNA_H-paniculata_contig8812.16727.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=104bp
MEYAIIEASGRQFWVERKKFFELNRLLINIGSTILIQRILFINKTDSIKI
GQPCLSDSLVEGVISKHFLGSKILVFKMKPKNKYRRKIGHGQNLTKLFVN
QIQ*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001787	Ribosomal_L21
IPR028909	L21p-like
IPR036164	L21-like_sf