prot_H-paniculata_contig880.16712.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig880.16712.1
Unique Nameprot_H-paniculata_contig880.16712.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length248
Homology
BLAST of mRNA_H-paniculata_contig880.16712.1 vs. uniprot
Match: D7FV81_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV81_ECTSI)

HSP 1 Score: 310 bits (793), Expect = 3.710e-102
Identity = 163/245 (66.53%), Postives = 187/245 (76.33%), Query Frame = 0
Query:    4 QGSAETGGSGAADAAVPVGPK---SEAEKAMEPQKIGPLLEHGGCELRIVNVTATANVGCTLDLQRVVMRARNAEYNPKRFSACVIRLIDKREPKATALVFKTGKVVVTGARSNRAVDYACSKFAAILGKLGNDTS------KFTLEADRRVHNMVATTDLGFPIRLEGLVASAHGEHCNYEPELFPGLIYRLAQPKICLLIFVSGKVVLTGGKTAEDLETAFKAIYPVLCSFKKATVLMQSSAT 239
            +G    G S  +  A P+G +   +EA+ AM  Q IGP   HG C+L +VNVTATA++ CT+DL+ VVMRARNAEYNPKRFSAC+IRLI+K EPKATALVFKTGKVVVTG+RSN +VDYAC  FA IL KL N +        F LE DRRV NMVATTD+GFPIRLEGLVAS  G  CNYEPELFPGLIYR+  PKIC LIFVSGKVVLTG K+A+ LE  FK +YP LC FKKATVL+Q+SAT
Sbjct:   87 RGGGGAGSSSGSKGAAPLGKQDAFNEAQTAMRAQVIGPFENHGQCKLSMVNVTATADMKCTIDLKTVVMRARNAEYNPKRFSACIIRLINKNEPKATALVFKTGKVVVTGSRSNASVDYACKTFARILSKLDNGSGGPSHKINFDLERDRRVQNMVATTDVGFPIRLEGLVASNQGCFCNYEPELFPGLIYRMKDPKICFLIFVSGKVVLTGAKSAQQLEDGFKKMYPTLCQFKKATVLLQTSAT 331          
BLAST of mRNA_H-paniculata_contig880.16712.1 vs. uniprot
Match: A0A7J7ISE2_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7ISE2_9RHOD)

HSP 1 Score: 212 bits (539), Expect = 2.470e-65
Identity = 109/194 (56.19%), Postives = 141/194 (72.68%), Query Frame = 0
Query:   46 ELRIVNVTATANVGCTLDLQRVVMRARNAEYNPKRFSACVIRLIDKREPKATALVFKTGKVVVTGARSNRAVDYACSKFAAILGKLGNDTSKFTLEADRRVHNMVATTDLGFPIRLEGLVASAHGEHCNYEPELFPGLIYRLAQPKICLLIFVSGKVVLTGGKTAEDLETAFKAIYPVLCSFKKATVLMQSSAT 239
            E+++ NV AT N+ C LDL+ + MRARNAEYNPKRF+A ++R+   R+PK TAL+F TGKVV+TGARS      A  K+A I+ KLG +  KF   AD  +HN+VA+ D+ FPIRLE L A AH  + +YEPELFPGL+YR+ +PK+ LLIFVSGKVV+TG K+ +DL  AF+ +YPVLC F+KA     S AT
Sbjct:   40 EVKLQNVVATVNLVCPLDLRHIAMRARNAEYNPKRFAAVIMRI---RDPKTTALIFSTGKVVITGARSEEDARLAARKYAKIVRKLGYEDVKF---ADFGLHNLVASADVRFPIRLEAL-AHAHSNYAHYEPELFPGLVYRMLEPKLALLIFVSGKVVITGAKSRDDLNDAFQKLYPVLCQFRKADSRPVSQAT 226          
BLAST of mRNA_H-paniculata_contig880.16712.1 vs. uniprot
Match: M1UPT6_CYAM1 (TATA-box binding protein n=2 Tax=cellular organisms TaxID=131567 RepID=M1UPT6_CYAM1)

HSP 1 Score: 202 bits (515), Expect = 1.930e-61
Identity = 104/194 (53.61%), Postives = 139/194 (71.65%), Query Frame = 0
Query:   46 ELRIVNVTATANVGCTLDLQRVVMRARNAEYNPKRFSACVIRLIDKREPKATALVFKTGKVVVTGARSNRAVDYACSKFAAILGKLGNDTSKFTLEADRRVHNMVATTDLGFPIRLEGLVASAHGEHCNYEPELFPGLIYRLAQPKICLLIFVSGKVVLTGGKTAEDLETAFKAIYPVLCSFKKATVLMQSSAT 239
            E+R+ NV A+ N+ C LDL+ + MRARNAEYNP+RF+A ++R+   R+P+ TAL+F +GKVV+TGARS      A  K+A I+ KLG    K    AD  +HN+VA+ D+ FPIRLE L A AH  + +YEPELFPGL+YR+ +P++ LLIFVSGKVV+TG K+ +DL  AF+ +YPVLC F+KA     S AT
Sbjct:   42 EVRLQNVVASVNLLCPLDLRHIAMRARNAEYNPQRFAAVIMRI---RDPRTTALIFSSGKVVITGARSEEDARLAARKYAKIVRKLGYADVKL---ADFELHNLVASADVRFPIRLEAL-AHAHSNYAHYEPELFPGLVYRMLEPRLALLIFVSGKVVITGAKSRDDLNEAFQRLYPVLCQFRKADSRAVSRAT 228          
BLAST of mRNA_H-paniculata_contig880.16712.1 vs. uniprot
Match: A0A7S0ZL16_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZL16_9RHOD)

HSP 1 Score: 199 bits (507), Expect = 8.250e-61
Identity = 102/184 (55.43%), Postives = 136/184 (73.91%), Query Frame = 0
Query:   48 RIVNVTATANVGCTLDLQRVVMRARNAEYNPKRFSACVIRLIDKREPKATALVFKTGKVVVTGARSNRAVDYACSKFAAILGKLGNDTSKFTLEADRRVHNMVATTDLGFPIRLEGLVASAHGEHCNYEPELFPGLIYRLAQPKICLLIFVSGKVVLTGGKTAEDLETAFKAIYPVLCSFKKAT 231
            +I NV +T N+G +LDL+ + +RARNAEYNPKRF+A ++R+   REPK TAL+F +GK+VVTGA+S  +   A  K+A I+ KLG + +KF+   + +V N+VA+ D+ FP+RLE L A AH   C+YEPELFPGLIYR+  PK+ LLIFVSGKVVLTG K  +++  AF  IYPVLC F+K T
Sbjct:   41 QIQNVVSTTNLGVSLDLKEIALRARNAEYNPKRFAAVIMRI---REPKTTALIFSSGKIVVTGAKSIDSAKLASRKYARIVQKLGYEAAKFS---EFKVQNIVASCDVTFPVRLEPL-AQAHSHFCSYEPELFPGLIYRMLDPKVVLLIFVSGKVVLTGAKVRDEIYDAFNNIYPVLCLFRKPT 217          
BLAST of mRNA_H-paniculata_contig880.16712.1 vs. uniprot
Match: A0A7S0XI96_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0XI96_9RHOD)

HSP 1 Score: 197 bits (501), Expect = 6.250e-60
Identity = 100/183 (54.64%), Postives = 135/183 (73.77%), Query Frame = 0
Query:   49 IVNVTATANVGCTLDLQRVVMRARNAEYNPKRFSACVIRLIDKREPKATALVFKTGKVVVTGARSNRAVDYACSKFAAILGKLGNDTSKFTLEADRRVHNMVATTDLGFPIRLEGLVASAHGEHCNYEPELFPGLIYRLAQPKICLLIFVSGKVVLTGGKTAEDLETAFKAIYPVLCSFKKAT 231
            I NV +T N+   LDL+ + +RARNAEYNPKRF+A ++R+   R+PK TAL+F +GK+VVTGA+   A  +A  K+A I+ KLG +++KF+   + +V N+VA+ D+ FP+RLE L A AH   C+YEPELFPGLIYR+  PK+ LL+FVSGKVVLTG K  +++  AFK IYPVLC F+K T
Sbjct:   40 IQNVVSTTNLSVNLDLKEIALRARNAEYNPKRFAAVIMRI---RDPKTTALIFSSGKIVVTGAKGIDAARFASRKYARIVQKLGYESAKFS---EFKVQNIVASCDVQFPVRLEPL-AHAHSNFCSYEPELFPGLIYRMINPKVVLLVFVSGKVVLTGAKVKQEIYDAFKNIYPVLCLFQKRT 215          
BLAST of mRNA_H-paniculata_contig880.16712.1 vs. uniprot
Match: A0A2V3IRU9_9FLOR (TATA-box-binding protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRU9_9FLOR)

HSP 1 Score: 197 bits (501), Expect = 1.490e-59
Identity = 105/182 (57.69%), Postives = 133/182 (73.08%), Query Frame = 0
Query:   49 IVNVTATANVGCTLDLQRVVMRARNAEYNPKRFSACVIRLIDKREPKATALVFKTGKVVVTGARSNRAVDYACSKFAAILGKLGNDTSKFTLEADRRVHNMVATTDLGFPIRLEGLVASAHGEHCNYEPELFPGLIYRLAQPKICLLIFVSGKVVLTGGKTAEDLETAFKAIYPVLCSFKKA 230
            I NV AT N+   LDL+++ +RARNAEYNPKRF+A ++R+   REPK TAL+F +GK+VVTGA+S R    A  K+A I+ KLG D +KF    +  V N+VA+ D+ FP+RLEGL A AH + C+YEPELFPGLIYR+ +PKI LLIFVSGKVVLTG K   D+  AF  IY VL +F+KA
Sbjct:   67 IQNVVATTNLDVKLDLKKIALRARNAEYNPKRFAAVIMRI---REPKTTALIFSSGKIVVTGAKSERESSRASRKYAKIVHKLGYDDAKFK---EFTVQNIVASCDVNFPVRLEGL-AHAHSQFCSYEPELFPGLIYRMIKPKIVLLIFVSGKVVLTGAKVRADIYEAFDNIYHVLQTFRKA 241          
BLAST of mRNA_H-paniculata_contig880.16712.1 vs. uniprot
Match: A0A507CSA2_9FUNG (Uncharacterized protein n=1 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507CSA2_9FUNG)

HSP 1 Score: 197 bits (500), Expect = 1.870e-59
Identity = 105/211 (49.76%), Postives = 140/211 (66.35%), Query Frame = 0
Query:   19 VPVGPKSEAEKAMEPQKIGPLLEHGGCELRIVNVTATANVGCTLDLQRVVMRARNAEYNPKRFSACVIRLIDKREPKATALVFKTGKVVVTGARSNRAVDYACSKFAAILGKLGNDTSKFTLEADRRVHNMVATTDLGFPIRLEGLVASAHGEHCNYEPELFPGLIYRLAQPKICLLIFVSGKVVLTGGKTAEDLETAFKAIYPVLCSFKK 229
             P G + +     +P ++   +   G    + N+ AT N+   LDL+ + + ARNAEYNPKRF+A ++R+   R+PK TAL+F +GK+VVTGA+S     YA  K+A I+ KLG   +KFT   + ++ N+V + D+ FPIRLEGL A+AH    NYEPELFPGLIYR+  PKI LLIFVSGKVVLTG KT E +  AF+ IYPVL  F+K
Sbjct:   35 APAGVQQQIPPQAQPGQLQQYIHTSGIVPILQNIVATVNLEVRLDLKTIALHARNAEYNPKRFAAVIMRI---RDPKTTALIFASGKMVVTGAKSEEQSRYAARKYARIIQKLGFQAAKFT---EFKIQNIVGSCDVKFPIRLEGL-ANAHSTFANYEPELFPGLIYRMVDPKIVLLIFVSGKVVLTGAKTREQIYDAFEKIYPVLTGFRK 238          
BLAST of mRNA_H-paniculata_contig880.16712.1 vs. uniprot
Match: TBP_ACACA (TATA-box-binding protein n=2 Tax=Acanthamoeba castellanii TaxID=5755 RepID=TBP_ACACA)

HSP 1 Score: 196 bits (499), Expect = 4.720e-59
Identity = 106/205 (51.71%), Postives = 140/205 (68.29%), Query Frame = 0
Query:   25 SEAEKAMEPQKIGPLLEHGGCELRIVNVTATANVGCTLDLQRVVMRARNAEYNPKRFSACVIRLIDKREPKATALVFKTGKVVVTGARSNRAVDYACSKFAAILGKLGNDTSKFTLEADRRVHNMVATTDLGFPIRLEGLVASAHGEHCNYEPELFPGLIYRLAQPKICLLIFVSGKVVLTGGKTAEDLETAFKAIYPVLCSFKK 229
            S+ ++   P  I P L+         N+ +T N+GC LDL+ + + ARNAEYNPKRF+A ++R+   REPK TAL+F +GK+V TGA+S  A   A  K+A I+ KLG   +KF    D ++ N+V + D+ FPIRLEGL A AH  +C+YEPELFPGLIYR+ QPKI LLIFVSGK+VLTG K  E++  AF+ IYPVL  +KK
Sbjct:   70 SDVDRTKHPSGIVPTLQ---------NIVSTVNLGCKLDLKNIALHARNAEYNPKRFAAVIMRI---REPKTTALIFASGKMVCTGAKSEEASRLAARKYARIIQKLGF-AAKFL---DFKIQNIVGSCDVRFPIRLEGL-AFAHNHYCSYEPELFPGLIYRMVQPKIVLLIFVSGKIVLTGAKVREEIYEAFENIYPVLTEYKK 257          
BLAST of mRNA_H-paniculata_contig880.16712.1 vs. uniprot
Match: A0A7S3T7H9_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3T7H9_EMIHU)

HSP 1 Score: 195 bits (495), Expect = 4.740e-59
Identity = 105/191 (54.97%), Postives = 135/191 (70.68%), Query Frame = 0
Query:   51 NVTATANVGCTLDLQRVVMRARNAEYNPKRFSACVIRLIDKREPKATALVFKTGKVVVTGARSNRAVDYACSKFAAILGKLGNDTSKFTLEADRRVHNMVATTDLGFPIRLEGLVASAHGEHCNYEPELFPGLIYRLAQPKICLLIFVSGKVVLTGGKTAEDLETAFKAIYPVLCSFKKATVLMQSSATRP 241
            N+ AT N+G  LDL+ + M ARNAEYNPKRFSA ++R+   R+PK TAL+FK+GK+VVTGA+S      A  KFA I+ KL +  ++FT   D ++ NMV + D+ FPIRLEGL A  H  + +YEPELFPGLIYR+ QPKI LLIFVSGKVVLTGGK   ++ +AF+ IYPVL  F+K      ++A  P
Sbjct:   29 NIVATCNLGIALDLKTIAMHARNAEYNPKRFSAVIMRI---RDPKTTALIFKSGKMVVTGAKSEEQARQAARKFARIVQKL-DFPARFT---DFKIQNMVGSCDVKFPIRLEGL-AYKHSHYSSYEPELFPGLIYRMVQPKIVLLIFVSGKVVLTGGKVRNEIFSAFEQIYPVLQEFRKLPAAAAATALTP 211          
BLAST of mRNA_H-paniculata_contig880.16712.1 vs. uniprot
Match: A0A1J5WKV9_9MICR (TATA-binding protein (TBP) n=1 Tax=Amphiamblys sp. WSBS2006 TaxID=1866961 RepID=A0A1J5WKV9_9MICR)

HSP 1 Score: 196 bits (498), Expect = 5.240e-59
Identity = 104/207 (50.24%), Postives = 146/207 (70.53%), Query Frame = 0
Query:   23 PKSEAEKAMEPQKIGPLLEHGGCELRIVNVTATANVGCTLDLQRVVMRARNAEYNPKRFSACVIRLIDKREPKATALVFKTGKVVVTGARSNRAVDYACSKFAAILGKLGNDTSKFTLEADRRVHNMVATTDLGFPIRLEGLVASAHGEHCNYEPELFPGLIYRLAQPKICLLIFVSGKVVLTGGKTAEDLETAFKAIYPVLCSFKK 229
            P ++ ++++ P  + P+++         N+ AT N+ C LDL+ + M+ARNAEYNPKRF+A ++R+   REPK TAL+F +GK+VVTGA+S      A  K+A I+ KLG   +KF    + ++ N+VA+ D+ FPIRLEGL A  H + C+YEPELFPGLIYR+ QPKI LL+FVSGK+VLTG K  E++ TAF+AIYPVL ++ K
Sbjct:   59 PLADVDRSIHPSGLVPIIQ---------NIVATVNMDCRLDLKTIAMQARNAEYNPKRFAAVIMRI---REPKTTALIFSSGKMVVTGAKSEEMSRLASRKYARIVHKLGFP-AKFL---EFKIQNIVASCDVRFPIRLEGL-ALGHSQFCSYEPELFPGLIYRMVQPKIVLLVFVSGKIVLTGAKLREEIYTAFEAIYPVLKAYSK 248          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig880.16712.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FV81_ECTSI3.710e-10266.53Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7J7ISE2_9RHOD2.470e-6556.19Uncharacterized protein n=1 Tax=Cyanidiococcus yan... [more]
M1UPT6_CYAM11.930e-6153.61TATA-box binding protein n=2 Tax=cellular organism... [more]
A0A7S0ZL16_9RHOD8.250e-6155.43Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A7S0XI96_9RHOD6.250e-6054.64Hypothetical protein n=1 Tax=Erythrolobus madagasc... [more]
A0A2V3IRU9_9FLOR1.490e-5957.69TATA-box-binding protein n=1 Tax=Gracilariopsis ch... [more]
A0A507CSA2_9FUNG1.870e-5949.76Uncharacterized protein n=1 Tax=Synchytrium endobi... [more]
TBP_ACACA4.720e-5951.71TATA-box-binding protein n=2 Tax=Acanthamoeba cast... [more]
A0A7S3T7H9_EMIHU4.740e-5954.97Hypothetical protein n=1 Tax=Emiliania huxleyi Tax... [more]
A0A1J5WKV9_9MICR5.240e-5950.24TATA-binding protein (TBP) n=1 Tax=Amphiamblys sp.... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000814TATA-box binding proteinPRINTSPR00686TIFACTORIIDcoord: 171..186
score: 73.54
coord: 73..92
score: 52.98
coord: 190..206
score: 79.72
coord: 49..64
score: 44.68
IPR000814TATA-box binding proteinPFAMPF00352TBPcoord: 47..130
e-value: 3.9E-27
score: 94.0
coord: 145..225
e-value: 2.5E-29
score: 101.1
IPR000814TATA-box binding proteinPANTHERPTHR10126TATA-BOX BINDING PROTEINcoord: 17..230
IPR000814TATA-box binding proteinHAMAPMF_00408TATA_bind_prot_archcoord: 43..230
score: 26.162
IPR012295TBP domain superfamilyGENE3D3.30.310.10coord: 51..227
e-value: 2.7E-64
score: 217.8
IPR012295TBP domain superfamilyGENE3D3.30.310.10coord: 54..146
e-value: 2.7E-64
score: 217.8
NoneNo IPR availablePANTHERPTHR10126:SF6TATA BOX-BINDING PROTEIN-LIKE PROTEIN 2-RELATEDcoord: 17..230
NoneNo IPR availableSUPERFAMILY55945TATA-box binding protein-likecoord: 44..135
NoneNo IPR availableSUPERFAMILY55945TATA-box binding protein-likecoord: 143..231
IPR030491TATA-box binding protein, conserved sitePROSITEPS00351TFIIDcoord: 175..224

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig880contigH-paniculata_contig880:28161..30422 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig880.16712.1mRNA_H-paniculata_contig880.16712.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig880 27272..30717 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig880.16712.1 ID=prot_H-paniculata_contig880.16712.1|Name=mRNA_H-paniculata_contig880.16712.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=248bp
MSRQGSAETGGSGAADAAVPVGPKSEAEKAMEPQKIGPLLEHGGCELRIV
NVTATANVGCTLDLQRVVMRARNAEYNPKRFSACVIRLIDKREPKATALV
FKTGKVVVTGARSNRAVDYACSKFAAILGKLGNDTSKFTLEADRRVHNMV
ATTDLGFPIRLEGLVASAHGEHCNYEPELFPGLIYRLAQPKICLLIFVSG
KVVLTGGKTAEDLETAFKAIYPVLCSFKKATVLMQSSATRPHKRAKI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000814TBP
IPR012295TBP_dom_sf
IPR030491TBP_CS