prot_H-paniculata_contig8721.16653.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig8721.16653.1
Unique Nameprot_H-paniculata_contig8721.16653.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length102
Homology
BLAST of mRNA_H-paniculata_contig8721.16653.1 vs. uniprot
Match: UPI000CED7874 (uncharacterized protein LOC112098012 n=1 Tax=Citrus clementina TaxID=85681 RepID=UPI000CED7874)

HSP 1 Score: 73.2 bits (178), Expect = 2.970e-14
Identity = 41/97 (42.27%), Postives = 53/97 (54.64%), Query Frame = 0
Query:    3 GLIENEVWTQVERPNSKLVVNTMMLYKGKIGKDGKVEKYKCRLVAHGNRQIKGAHFQEASSPASAAASTKTILSLAAIQDWELRHVDFEQAYLQAPL 99
             LI+N  W+ V R   K VV    +Y+ K   DG V KYK RLVA G +QI G +  E  SP    A+ + ILSLA +  W++R VD   A+L   L
Sbjct:   46 ALIQNGTWSLVPRIADKRVVGNKWVYRAKYNTDGSVAKYKARLVAKGFQQIMGVNCFETFSPVIKPATVRVILSLAVMNQWKIRQVDVNNAFLNGEL 142          
BLAST of mRNA_H-paniculata_contig8721.16653.1 vs. uniprot
Match: UPI00090552C3 (uncharacterized protein LOC109208296 n=1 Tax=Nicotiana attenuata TaxID=49451 RepID=UPI00090552C3)

HSP 1 Score: 71.6 bits (174), Expect = 6.600e-14
Identity = 35/101 (34.65%), Postives = 59/101 (58.42%), Query Frame = 0
Query:    1 MQGLIENEVWTQVERPNSKLVVNTMMLYKGKIGKDGKVEKYKCRLVAHGNRQIKGAHFQEASSPASAAASTKTILSLAAIQDWELRHVDFEQAYLQAPLDQ 101
            ++ L +N  W  V  P  K ++ +  +YK K   +GKVE++K RLVA G  Q +G  + E  SP S   + ++++++AA +DW+L  +D   A+LQ  L +
Sbjct:   24 VKALEDNRTWEVVPIPVGKFIIGSKWVYKIKYNSNGKVERFKARLVAKGYNQQEGLDYHETFSPVSKMVTVRSVIAIAASKDWKLHQMDVYNAFLQRDLQE 124          
BLAST of mRNA_H-paniculata_contig8721.16653.1 vs. uniprot
Match: A0A151T5R4_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Cajanus cajan TaxID=3821 RepID=A0A151T5R4_CAJCA)

HSP 1 Score: 75.1 bits (183), Expect = 1.310e-13
Identity = 38/101 (37.62%), Postives = 59/101 (58.42%), Query Frame = 0
Query:    1 MQGLIENEVWTQVERPNSKLVVNTMMLYKGKIGKDGKVEKYKCRLVAHGNRQIKGAHFQEASSPASAAASTKTILSLAAIQDWELRHVDFEQAYLQAPLDQ 101
            M  L EN+ W  V+ P  K VV    ++  K+G DGK+++YK RLVA G  Q  G  ++E  +P +   S + ++SLAA  DW+L  +D + A+L   L++
Sbjct:  872 MAALEENKTWDIVKLPKEKKVVGCRWIFTTKMGADGKIDRYKARLVAQGYTQTHGIDYEETFAPVAKLNSIRILISLAANLDWKLHQLDVKNAFLNGKLEE 972          
BLAST of mRNA_H-paniculata_contig8721.16653.1 vs. uniprot
Match: UPI000D630AD2 (probable LRR receptor-like serine/threonine-protein kinase At3g47570 n=1 Tax=Citrus sinensis TaxID=2711 RepID=UPI000D630AD2)

HSP 1 Score: 73.9 bits (180), Expect = 3.350e-13
Identity = 39/99 (39.39%), Postives = 56/99 (56.57%), Query Frame = 0
Query:    3 GLIENEVWTQVERPNSKLVVNTMMLYKGKIGKDGKVEKYKCRLVAHGNRQIKGAHFQEASSPASAAASTKTILSLAAIQDWELRHVDFEQAYLQAPLDQ 101
             LIEN  W+ V R  ++ VV    +Y+ K   DG V KYK RLVA G +QI+G ++ +  SP    A+ + +LSLA +  W +R VD   A+L   L +
Sbjct:   33 ALIENRTWSLVRRTENQKVVGNKWVYRIKYNTDGSVAKYKARLVAKGFQQIEGVNYFDTFSPVIKPATVRVVLSLAVMNQWIVRQVDVNNAFLNGELSE 131          
BLAST of mRNA_H-paniculata_contig8721.16653.1 vs. uniprot
Match: A0A4S4N6A1_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Antrodiella citrinella TaxID=2447956 RepID=A0A4S4N6A1_9APHY)

HSP 1 Score: 73.6 bits (179), Expect = 4.440e-13
Identity = 34/101 (33.66%), Postives = 67/101 (66.34%), Query Frame = 0
Query:    1 MQGLIENEVWTQVERPNSKLVVNTMMLYKGKIGKDGKVEKYKCRLVAHGNRQIKGAHFQEASSPASAAASTKTILSLAAIQDWELRHVDFEQAYLQAPLDQ 101
            ++  ++ +++T V+RP ++ V+++  ++K K+G DG++EKYK RLVA G  Q++G  + +  +P S  +S +T+L+LA   D E+  +D + A+L   L++
Sbjct:  301 LEAFVKAKLYTAVDRPRNRKVIDSKWVFKYKLGPDGQIEKYKARLVAKGFTQVEGLDYNDTFAPVSKFSSIRTLLALADKLDLEVHQMDVKSAFLNGDLEE 401          
BLAST of mRNA_H-paniculata_contig8721.16653.1 vs. uniprot
Match: A0A8J5ZA79_9ROSI (Integrase catalytic domain-containing protein n=2 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J5ZA79_9ROSI)

HSP 1 Score: 73.6 bits (179), Expect = 4.560e-13
Identity = 38/99 (38.38%), Postives = 55/99 (55.56%), Query Frame = 0
Query:    1 MQGLIENEVWTQVERPNSKLVVNTMMLYKGKIGKDGKVEKYKCRLVAHGNRQIKGAHFQEASSPASAAASTKTILSLAAIQDWELRHVDFEQAYLQAPL 99
            ++ L EN  W  V  P  K+ +    +YK K   DG +E++K RLV  G RQ  G  FQE  SP +   + +T++S+AA+ DW L  +D   A+LQ  L
Sbjct:  890 IRALEENGTWEVVSLPRGKVPIGCKWVYKVKYQSDGSIERFKARLVGKGYRQRAGLDFQETFSPVAKQVTVRTVISVAAMNDWPLFQMDVYNAFLQGDL 988          
BLAST of mRNA_H-paniculata_contig8721.16653.1 vs. uniprot
Match: Q7X6S0_ORYSJ (OSJNBb0011N17.2 protein n=2 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=Q7X6S0_ORYSJ)

HSP 1 Score: 73.2 bits (178), Expect = 6.210e-13
Identity = 39/101 (38.61%), Postives = 56/101 (55.45%), Query Frame = 0
Query:    1 MQGLIENEVWTQVERPNSKLVVNTMMLYKGKIGKDGKVEKYKCRLVAHGNRQIKGAHFQEASSPASAAASTKTILSLAAIQDWELRHVDFEQAYLQAPLDQ 101
            ++ L +N+ W  V  PN K VVN   +Y  K   DGKVE+YK RLVA G  Q  G  + E  +P +  ++ +TI+S A   DW L  +D + A+L   L +
Sbjct:  773 LEALEKNKTWDLVSYPNGKKVVNCKWVYAVKQNPDGKVERYKARLVAKGYSQTYGIDYDETFAPVAKMSTVRTIISCAVNFDWPLHQLDVKNAFLHGDLQE 873          
BLAST of mRNA_H-paniculata_contig8721.16653.1 vs. uniprot
Match: A0A1U8Q9U1_NELNU (uncharacterized protein LOC109115353 n=1 Tax=Nelumbo nucifera TaxID=4432 RepID=A0A1U8Q9U1_NELNU)

HSP 1 Score: 72.8 bits (177), Expect = 8.070e-13
Identity = 37/101 (36.63%), Postives = 56/101 (55.45%), Query Frame = 0
Query:    1 MQGLIENEVWTQVERPNSKLVVNTMMLYKGKIGKDGKVEKYKCRLVAHGNRQIKGAHFQEASSPASAAASTKTILSLAAIQDWELRHVDFEQAYLQAPLDQ 101
            M+ L +N  W  V  P  K +V    ++  K+G +GK+E+YK RLVA G  Q  G  ++E  +  +   S + +LS+AA  DWEL  +D   A+L   LD+
Sbjct:  414 MKALNDNNTWEVVNMPEGKKLVGCKWIFMVKVGLEGKIERYKARLVAQGYTQTYGLDYEETFASVAKLNSIRVLLSMAANLDWELHQMDVSNAFLNGTLDE 514          
BLAST of mRNA_H-paniculata_contig8721.16653.1 vs. uniprot
Match: A0A061F8M9_THECC (Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 n=1 Tax=Theobroma cacao TaxID=3641 RepID=A0A061F8M9_THECC)

HSP 1 Score: 72.8 bits (177), Expect = 8.130e-13
Identity = 38/99 (38.38%), Postives = 56/99 (56.57%), Query Frame = 0
Query:    1 MQGLIENEVWTQVERPNSKLVVNTMMLYKGKIGKDGKVEKYKCRLVAHGNRQIKGAHFQEASSPASAAASTKTILSLAAIQDWELRHVDFEQAYLQAPL 99
            ++ L +N  W+ V+ P++   V    +YK K+  DGKVE+YK RLVA G  QI+G  +QE  SP +     +   +LAA Q+W L  +D   A+L   L
Sbjct:  180 LKALEDNGTWSIVQLPSNYHAVGCKWVYKVKLNADGKVERYKARLVAKGYNQIEGFDYQETFSPVARQTIVRMFFALAAAQNWRLSQLDINNAFLNGEL 278          
BLAST of mRNA_H-paniculata_contig8721.16653.1 vs. uniprot
Match: A0A445IW95_GLYSO (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Glycine soja TaxID=3848 RepID=A0A445IW95_GLYSO)

HSP 1 Score: 72.8 bits (177), Expect = 8.620e-13
Identity = 34/101 (33.66%), Postives = 63/101 (62.38%), Query Frame = 0
Query:    1 MQGLIENEVWTQVERPNSKLVVNTMMLYKGKIGKDGKVEKYKCRLVAHGNRQIKGAHFQEASSPASAAASTKTILSLAAIQDWELRHVDFEQAYLQAPLDQ 101
            ++ + +N+VW  V +P SK  ++   +YK K   +GKV KYK RLVA G  Q  G  ++E  +P +   + +T++++A++++W +  +D + A+L  PLD+
Sbjct: 1547 LKSIEKNQVWELVSQPKSKKPIDVKWIYKIKTNPEGKVVKYKARLVAKGFLQKAGIDYREVFAPVARIETIRTVVAIASLKNWTMHQLDVKCAFLNGPLDE 1647          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8721.16653.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI000CED78742.970e-1442.27uncharacterized protein LOC112098012 n=1 Tax=Citru... [more]
UPI00090552C36.600e-1434.65uncharacterized protein LOC109208296 n=1 Tax=Nicot... [more]
A0A151T5R4_CAJCA1.310e-1337.62Retrovirus-related Pol polyprotein from transposon... [more]
UPI000D630AD23.350e-1339.39probable LRR receptor-like serine/threonine-protei... [more]
A0A4S4N6A1_9APHY4.440e-1333.66Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A8J5ZA79_9ROSI4.560e-1338.38Integrase catalytic domain-containing protein n=2 ... [more]
Q7X6S0_ORYSJ6.210e-1338.61OSJNBb0011N17.2 protein n=2 Tax=Oryza sativa subsp... [more]
A0A1U8Q9U1_NELNU8.070e-1336.63uncharacterized protein LOC109115353 n=1 Tax=Nelum... [more]
A0A061F8M9_THECC8.130e-1338.38Cysteine-rich RLK (RECEPTOR-like protein kinase) 8... [more]
A0A445IW95_GLYSO8.620e-1333.66Retrovirus-related Pol polyprotein from transposon... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 8..100
e-value: 2.7E-16
score: 60.0
NoneNo IPR availablePANTHERPTHR11439:SF273coord: 4..101
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 4..101

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8721contigH-paniculata_contig8721:6151..6456 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8721.16653.1mRNA_H-paniculata_contig8721.16653.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig8721 6061..6459 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig8721.16653.1 ID=prot_H-paniculata_contig8721.16653.1|Name=mRNA_H-paniculata_contig8721.16653.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=102bp
MQGLIENEVWTQVERPNSKLVVNTMMLYKGKIGKDGKVEKYKCRLVAHGN
RQIKGAHFQEASSPASAAASTKTILSLAAIQDWELRHVDFEQAYLQAPLD
Q*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like