mRNA_H-paniculata_contig8718.16650.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig8718.16650.1 vs. uniprot
Match: D7FVF0_ECTSI (Dnm1, dynamin-related GTPase involved in mitochondrial division n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVF0_ECTSI) HSP 1 Score: 187 bits (476), Expect = 2.770e-51 Identity = 108/124 (87.10%), Postives = 110/124 (88.71%), Query Frame = 1
Query: 169 RQPPQMVKLPQPPETMRQSEEPTDRERCEMEIIKSLMRSYFDIARKNFQDLVPKXXXXXXXXXXXXXXXXXXXXXLYKEDLTGELMRETDDVAERRRISRDMLVLLEKAVGIVSEVRDFNPFLG 540
RQPPQMVKLPQPPETMRQS+EPTDRERCEMEIIKSLMRSYFDIARKNFQDLVPK XXXXXXXX LYKEDLTGELMRETDDVAERRRISRDML LL+KAVGIVSEVRDFNPFLG
Sbjct: 724 RQPPQMVKLPQPPETMRQSDEPTDRERCEMEIIKSLMRSYFDIARKNFQDLVPKTIMHFLVNDVXXXXXXXXVSKLYKEDLTGELMRETDDVAERRRISRDMLSLLKKAVGIVSEVRDFNPFLG 847
BLAST of mRNA_H-paniculata_contig8718.16650.1 vs. uniprot
Match: A0A836CKP3_9STRA (Dynamin central region-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKP3_9STRA) HSP 1 Score: 134 bits (338), Expect = 1.520e-32 Identity = 72/115 (62.61%), Postives = 83/115 (72.17%), Query Frame = 1
Query: 184 MVKLPQPPETMRQSEEPTDRERCEMEIIKSLMRSYFDIARKNFQDLVPKXXXXXXXXXXXXXXXXXXXXXLYKEDLTGELMRETDDVAERRRISRDMLVLLEKAVGIVSEVRDFN 528
MVKLPQ PETMRQS+EPTDRER E EIIKSLM SYFDI RKNFQD+VPK LY+E+L ELMRET+DVAERRRI+R+M LL +A+ I++EVRDFN
Sbjct: 634 MVKLPQVPETMRQSKEPTDRERVETEIIKSLMESYFDIVRKNFQDMVPKAIMHFLVNEVIQSMQNQLVSSLYREELIAELMRETEDVAERRRIAREMFELLHRAMAILNEVRDFN 748
BLAST of mRNA_H-paniculata_contig8718.16650.1 vs. uniprot
Match: A0A7S2NRY4_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NRY4_9STRA) HSP 1 Score: 114 bits (285), Expect = 5.730e-28 Identity = 66/123 (53.66%), Postives = 77/123 (62.60%), Query Frame = 1
Query: 166 SRQPPQMVKLPQPPETMRQSEEPTDRERCEMEIIKSLMRSYFDIARKNFQDLVPKXXXXXXXXXXXXXXXXXXXXXLYKEDLTGELMRETDDVAERRRISRDMLVLLEKAVGIVSEVRDFNPF 534
S PP +V+LPQ P+TMRQ++ PTDRER E EIIKSL+ SYF I RKNF DLVPK LY+E+ ELMRE DDVA RR +M LL KA+ IV+EVRDFN F
Sbjct: 69 SSAPPNIVQLPQVPDTMRQTDLPTDRERIETEIIKSLIESYFKIVRKNFTDLVPKTIMYFLVNHARDSMQNELVSELYRENNIAELMREADDVALRRNTCMEMRDLLRKALEIVNEVRDFNTF 191
BLAST of mRNA_H-paniculata_contig8718.16650.1 vs. uniprot
Match: A0A7S0KCE8_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus aporus TaxID=1398097 RepID=A0A7S0KCE8_9STRA) HSP 1 Score: 111 bits (277), Expect = 4.660e-27 Identity = 61/120 (50.83%), Postives = 77/120 (64.17%), Query Frame = 1
Query: 175 PPQMVKLPQPPETMRQSEEPTDRERCEMEIIKSLMRSYFDIARKNFQDLVPKXXXXXXXXXXXXXXXXXXXXXLYKEDLTGELMRETDDVAERRRISRDMLVLLEKAVGIVSEVRDFNPF 534
PP +V+LPQ P+TMRQ++ PTDRER E EIIKSL+ SYF I RKNF D+VPK LY+E +LMRE +D+A+RR+ +M LL KA+ IV+EVRDFN F
Sbjct: 48 PPSIVQLPQVPDTMRQTDLPTDRERIETEIIKSLIESYFCIVRKNFIDMVPKTIMYFLVNHSRDSMQNELVSELYREANIADLMREAEDIAQRRKTCHEMRELLRKALDIVNEVRDFNTF 167
BLAST of mRNA_H-paniculata_contig8718.16650.1 vs. uniprot
Match: A0A2D4BI22_PYTIN (Dynamin-2 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BI22_PYTIN) HSP 1 Score: 118 bits (295), Expect = 8.780e-27 Identity = 66/117 (56.41%), Postives = 78/117 (66.67%), Query Frame = 1
Query: 184 MVKLPQPPETMRQSEEPTDRERCEMEIIKSLMRSYFDIARKNFQDLVPKXXXXXXXXXXXXXXXXXXXXXLYKEDLTGELMRETDDVAERRRISRDMLVLLEKAVGIVSEVRDFNPF 534
+VKLPQ P +MRQSEEP+DRER E EIIKSL+ SYFDI RKNF DLVPK LY+ED GEL+RET DVA RR +M +LL++A+ IV+EVRDFN F
Sbjct: 610 VVKLPQVPVSMRQSEEPSDRERIETEIIKSLLASYFDIVRKNFLDLVPKAIMNFMVNHAKENVQNELVSALYREDKLGELLRETGDVAARRSNCHEMRMLLQRALEIVNEVRDFNTF 726
BLAST of mRNA_H-paniculata_contig8718.16650.1 vs. uniprot
Match: A0A8K1C5A9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C5A9_PYTOL) HSP 1 Score: 117 bits (293), Expect = 1.590e-26 Identity = 66/119 (55.46%), Postives = 78/119 (65.55%), Query Frame = 1
Query: 178 PQMVKLPQPPETMRQSEEPTDRERCEMEIIKSLMRSYFDIARKNFQDLVPKXXXXXXXXXXXXXXXXXXXXXLYKEDLTGELMRETDDVAERRRISRDMLVLLEKAVGIVSEVRDFNPF 534
P +VKLPQ P +MRQSEEP+DRER E EIIKSL+ SYFDI RKNF DLVPK LY+ED EL+RET DVA RR +M +LL++A+ IV+EVRDFN F
Sbjct: 585 PAVVKLPQVPVSMRQSEEPSDRERIETEIIKSLLASYFDIVRKNFLDLVPKAIMNFMVINAKENVQNVLVSALYREDQLNELLRETGDVAARRANCHEMRMLLQRALEIVNEVRDFNTF 703
BLAST of mRNA_H-paniculata_contig8718.16650.1 vs. uniprot
Match: A0A662WC88_9STRA (GED domain-containing protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WC88_9STRA) HSP 1 Score: 112 bits (280), Expect = 4.470e-26 Identity = 63/119 (52.94%), Postives = 76/119 (63.87%), Query Frame = 1
Query: 178 PQMVKLPQPPETMRQSEEPTDRERCEMEIIKSLMRSYFDIARKNFQDLVPKXXXXXXXXXXXXXXXXXXXXXLYKEDLTGELMRETDDVAERRRISRDMLVLLEKAVGIVSEVRDFNPF 534
P +VKLPQ P +MRQ+E+PTDRER E EIIKSL+ SYFDI RKNF DLVPK LY+ED EL+ ET D+A RR +M LL++A+ IV+EVRDFN F
Sbjct: 191 PAVVKLPQVPVSMRQAEDPTDRERIETEIIKSLLASYFDIVRKNFLDLVPKAIMCFMVAHSKENIQNELVSSLYREDKIAELLAETGDIAVRRSNCDEMRTLLQRALEIVNEVRDFNTF 309
BLAST of mRNA_H-paniculata_contig8718.16650.1 vs. uniprot
Match: A0A024TUW8_9STRA (Uncharacterized protein n=14 Tax=Aphanomyces TaxID=100860 RepID=A0A024TUW8_9STRA) HSP 1 Score: 114 bits (286), Expect = 1.360e-25 Identity = 64/117 (54.70%), Postives = 75/117 (64.10%), Query Frame = 1
Query: 184 MVKLPQPPETMRQSEEPTDRERCEMEIIKSLMRSYFDIARKNFQDLVPKXXXXXXXXXXXXXXXXXXXXXLYKEDLTGELMRETDDVAERRRISRDMLVLLEKAVGIVSEVRDFNPF 534
+VKLPQ P TMRQ++ PTDRER E EIIKSL+ SYFDI RKNF DLVPK LYKED G+L+RE+ D+A RR +M LL KA+ IV+EVRDFN F
Sbjct: 573 VVKLPQVPTTMRQADIPTDRERIETEIIKSLLASYFDIVRKNFLDLVPKAIMCFMVNHAKDQVQNQLVSSLYKEDKLGDLLRESGDIASRRANCSEMRTLLSKALDIVNEVRDFNTF 689
BLAST of mRNA_H-paniculata_contig8718.16650.1 vs. uniprot
Match: A0A485KTM0_9STRA (Aste57867_11655 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KTM0_9STRA) HSP 1 Score: 114 bits (284), Expect = 2.540e-25 Identity = 64/115 (55.65%), Postives = 73/115 (63.48%), Query Frame = 1
Query: 184 MVKLPQPPETMRQSEEPTDRERCEMEIIKSLMRSYFDIARKNFQDLVPKXXXXXXXXXXXXXXXXXXXXXLYKEDLTGELMRETDDVAERRRISRDMLVLLEKAVGIVSEVRDFN 528
+VKLPQ P TMRQ E PTDRER E EIIKSL+ SYFDI RKNF DLVPK LYKE+ GEL+RE+ D+A RR +M LL KA+ IV+EVRDFN
Sbjct: 584 VVKLPQVPSTMRQGEVPTDRERIETEIIKSLLASYFDIVRKNFLDLVPKTIMCFMVNHAKDQVQNQLVSTLYKEEKLGELLRESGDIASRRANCSEMRTLLSKALDIVNEVRDFN 698
BLAST of mRNA_H-paniculata_contig8718.16650.1 vs. uniprot
Match: K0RKT6_THAOC (GED domain-containing protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RKT6_THAOC) HSP 1 Score: 107 bits (267), Expect = 3.130e-25 Identity = 62/121 (51.24%), Postives = 77/121 (63.64%), Query Frame = 1
Query: 175 PPQMVKLPQPPETMRQSEEP-TDRERCEMEIIKSLMRSYFDIARKNFQDLVPKXXXXXXXXXXXXXXXXXXXXXLYKEDLTGELMRETDDVAERRRISRDMLVLLEKAVGIVSEVRDFNPF 534
PP +V+LPQ P+TMRQ++ P +DRER E EIIKSL+ SYF I RKN+ D VPK LY+E G LMRE DD+A+RRR +M LLEKA+ IV+EVRD+N F
Sbjct: 76 PPAVVQLPQVPDTMRQTDAPPSDRERVETEIIKSLIESYFSIVRKNYIDSVPKTIMYFLVNHVKDELQNELVSELYREAEIGNLMREADDIAQRRRTCVEMKELLEKALEIVNEVRDYNSF 196 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8718.16650.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig8718.16650.1 >prot_H-paniculata_contig8718.16650.1 ID=prot_H-paniculata_contig8718.16650.1|Name=mRNA_H-paniculata_contig8718.16650.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=139bp MSFIFGGGPQQQHSRQPPQMVKLPQPPETMRQSEEPTDRERCEMEIIKSLback to top mRNA from alignment at H-paniculata_contig8718:3196..5288- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig8718.16650.1 ID=mRNA_H-paniculata_contig8718.16650.1|Name=mRNA_H-paniculata_contig8718.16650.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2093bp|location=Sequence derived from alignment at H-paniculata_contig8718:3196..5288- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig8718:3196..5288- >mRNA_H-paniculata_contig8718.16650.1 ID=mRNA_H-paniculata_contig8718.16650.1|Name=mRNA_H-paniculata_contig8718.16650.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=834bp|location=Sequence derived from alignment at H-paniculata_contig8718:3196..5288- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |