prot_H-paniculata_contig871.16647.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig871.16647.1
Unique Nameprot_H-paniculata_contig871.16647.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length764
Homology
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BLAST of mRNA_H-paniculata_contig871.16647.1 vs. uniprot
Match: A0A6H5LBA6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LBA6_9PHAE)

HSP 1 Score: 70.1 bits (170), Expect = 1.300e-8
Identity = 35/61 (57.38%), Postives = 43/61 (70.49%), Query Frame = 0 
Query:  358 ESATREERRRKREAALLMRNECSFSGCRTRPSFGIEGDKRPTACSEHRSEGMVTVKYIKSR 418
            ES    ERRR+ E  L   +EC  SGC TRPS+G+EGDKRPTAC +H + GMV VK+ +SR
Sbjct:  511 ESLETAERRRQEELVLEDYDECCVSGCATRPSYGMEGDKRPTACVDHAAIGMVIVKHSRSR 571
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig871.16647.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5LBA6_9PHAE1.300e-857.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR31251:SF108SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 7coord: 136..762
NoneNo IPR availablePANTHERPTHR31251FAMILY NOT NAMEDcoord: 136..762
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..733
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 734..754
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 755..763

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig871contigH-paniculata_contig871:27642..30551 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig871.16647.1mRNA_H-paniculata_contig871.16647.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig871 27156..31236 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig871.16647.1 ID=prot_H-paniculata_contig871.16647.1|Name=mRNA_H-paniculata_contig871.16647.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=764bp
MGHRETKRRPLHLHIKRCILKTMPQLSFKGPYSSTRNPCNSKIYHIRSIR
TRNHHHHLPTTHHHQAPPPQQQQQQQLLQQHSAPPQAQQQHHEMHHDQSA
QTGQQQPQQQQSPLPALAAGYYSGGGSGGYDPTNCAGGAGLGAGGGAPSS
APVVGTSAATLPLPLPAAPPIPGMGPNGMEGGAHGDMHGVNGAQAGHDGW
MIGISQHDANGVGGVGGSRNLKARLGGSRQDGVAGGVVGDGNGIMQQQQQ
QQQQQHHQHQQQLSGDGVEGGVGHHSDVLGMSVGVAEAAGANHGAPHHAI
HGHGIPNHELLEMSMDGRAMGHSGSATGMGVSIQMAVGEMGVASVGMGTM
DGMPELAESATREERRRKREAALLMRNECSFSGCRTRPSFGIEGDKRPTA
CSEHRSEGMVTVKYIKSRSCDYDGCTTYPSYNVKGKRRARRCGKHRLDGM
VDVKAPRCEHPGCPTLPYYGSEGEKKRRWCAVHKLPGMVDVKSRRCDFET
CLTQPTYGIRGENRARRCAKHKDPGMVNIVHRHCEFEGCTTQPYYGVEGN
RGGSHCAAHKLPGMVKTKGQRCNGPGCSTRPSYGNDGDRRPSYCGKHKAP
NMVDVINRRCEEPGCVSQPTHAIEGTGLAVRCAVHSSKGMVNIKSRRCEL
EGCSTQPYYGHEGAKRGTRCSKHKLQGMIDVHNRRCQHEGCQVSASFGVK
EGGNGATHCAKHKMQGMAPLYRRKAVGGKLSSRAAAAAAAAAAAAVVAAT
AASAPPPPTPPAM*
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