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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 4 |
| Model size | 865 |
| Cds size | 849 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig8708.16642.1 >prot_H-paniculata_contig8708.16642.1 ID=prot_H-paniculata_contig8708.16642.1|Name=mRNA_H-paniculata_contig8708.16642.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=283bp
MSPEEKLLVQRSNKRDYTKSRDYTDSTASLDDNVSKANMGLCEAELEMER
KIHQASVVTVMSDEEVCQLFGIVPSTVETPVATGAGVEVVAAATAAEGED
LGRQGNKNEKENGEDDKREGGKENEEDDLSVLIANLMVEFNAELERVQSN
FNRELRRIKCRHVAKVRAADERLSAALAEKTIAETRAREAQKLVEASERE
NEELKALLGQMQETRALRVRTTPEDGLGRITRVASASASASTSTSTSTST
FPDPISPSLAGVGLHTLIHKEVECGSGVCLEWR back to topmRNA from alignment at H-paniculata_contig8708:723..8195+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig8708.16642.1 ID=mRNA_H-paniculata_contig8708.16642.1|Name=mRNA_H-paniculata_contig8708.16642.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7473bp|location=Sequence derived from alignment at H-paniculata_contig8708:723..8195+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GCCTGCCTGAAGTGCGATGTCTCCCGAGGAGAAACTGTTAGTTCAACGAT
CCAACAAGCGAGGTGAGTAGTGTCCGGGACCGATTTTGAAGACCAAGTCC
CATGAGATATCTATGAGCGAACGTTCAAACGATCATAGCATTTGCAAGCT
TTCTCTGTTTTGGTTCAACTACGCTTGTGAGGAGTGTAAGGGCCGCGTGT
TGAACAGTTTTTTCAAACCCGATTTTCTCGCAGACTACCGCGTACGATGC
TAGTGGCGGACACCGAAAGCTATGTCGATGAGACTATCTTCTTGAAATCT
GTCGATTGGTGTGCTTCTTCGAACGAACATAGGCTTTGCTGCCGATAAAA
TGGAAATCGAAAAAACTCACCCCTCGCGTGTTGACACCGCACCTACTGGT
TTTAGAAACAAACCGAAACGTCGGCAAGAGCTAATTCAGAGCTAACGGCG
CGCAAACCTATCTCGAAACCCCTAGTCCTCTGTCCCATAGACGACTGTAA
AGCACTTGAGGTCGGCATGATCTGCACGAGTCGTGGATGTCGCAGGGTTC
CAAACACCCACTTACTCTAACCCCGGCATCTGAAATCCTGGCTGAACCTT
GGCTGAATCCAAACTTTCAAGTATTTTTACCTCAACTCTGTGTTCATGAT
TGATGTTTGATGAGGTAGGGGTACAGTGGCACGATTGGCGTTCGGGAGTG
TCGTGTCGTGTTGTATCTTCGCTAGGCTATCCACTAATCACCTCTAGGGG
AATCTAGTTGACCTGTGTAGAAACGAAGTAAGATAATGATGATATTTAAC
CCTTACTCTCCTGGGGACCTGTCGTGAGACATGAGCATCTTGGAACACGC
GCAATCATCACAATCCGGTGGACACGGCAGACAGTAGTATGCATCTAATA
CTAAACACTATCACAGCAAATTATGTGCGCGGTGGTAGCGCTGTAACGGC
AACACAATGAGGAGAGACCGAGCGAAGTTGACAGGCAGCAGCATCTCCTA
AGAGTTCCGTAACGAGTGATGGTCGCTGTGTGTATGGCGTCCTGCATGCG
TGATGATACACGCAGACACAGAAGCAGGCAGCCTGCCACAAGTCGTGGCA
GTCGAAAGACGACACCACTGATGATGAACATGGTAGCTCGCCGTTGGACC
TCCTAGAAAAAAGCTGTTTCTCCTTCAACTATTTCTTCTCTTTGCTGTAG
TTGAACGGATTAAGATGGAGCTTTCTGAGTTGCTGTCTACGTACAATAGG
AGATTAGACCTATACAGTTATTCACCCCCCGGACAAATATGAATAATAGT
CGTATTCGCCACGGAAATTAAAAATTATCCGCCGGAGTTTCAGAATGAGC
GGACCCATCAAATAAAATATCCACTCCTGTCCATTCGATTTACGTGTATT
ATTAGCAGTAGTGGATGGTCCAGAGCACATAAAACACGCGAGCTCATTCT
GAATCTCAGGCGAATACATTTATGTTTTCGCGGCGAGTACATTTATATTT
GTATTTGTCCGGGGGGGGCAGCTATTATCCGAAACGATCATATATTTTTA
GGGGAAGCGATACGGGTGGTCCACGGTTGAAAACTGGTCTCAACGATCGA
AATGAAAACTCCCCTATTTGTTGTTTTTACGGCATAGCTCAAAATTACGA
ATTACTTGATTCAAGTATACAACATTATATCGAGCAAATGTTATCTCCGA
GATCGAACTGGCTGATGCCAATATACTAAGTGCAGGTGGGCAGCTGTGAT
CTAGTGCATGTGCAGTGGCGATTTTGGATTCGTCTTCTTTTGTTGACGCA
GGTCACGACAATCGTGTAATTTAAAGATATTTTTGTCCTTAGCTCGCTCA
TTTTTTTAGCCAAAATCATCACTGCACATGCACTAGTACTGGTCACAGCG
AACACAGCACAACAAACCGTGCACGATTCCTCGTAGTTGACAAGAACTGC
CTCATCAAAGATCGCATGGCTTGCCATGTGACCAAGTTTTTCGATACTAA
TCTCAAGTGTAAAACAATGTAGAACATAACTCAGCATGATTCGGCGGCTA
CGCGTTTCTGTTCTAATTTATAGTATTAAGCCATATGCCTAAATTGAGAA
CCATCTCAGCAAGATTAAAAATAGGAATCACATAGCACAATGTTTTCAGG
TGGGTATAGCCACTGGCGGGATAGAAGCCACCTTGTGGGCGGTTTATAGT
AGTACAACAGTCCGTACAGACGGTTGACCAGATCGCTCGACAAGACCTGC
CCCCACCCCCTTGTGTGCGTTTTAGCAGCCCAGATGGTAGTGCACAGCGC
TCAGCCCTGCCTCATGTGTGTTGTGCGGACCAACTTGCCTCATCTGAGTT
CTATCGGTTCTTGCGGGTTGTTGTGTGTGCATTTCTGATTGGCTCATTTG
AAAAATTCGGTTAGGTCTGCAACTAAAATAATCTCGGGGACAGGTTTCCA
ACCATGAATCACCCGTATCGATGCACCTTCACAGCGCTGTTAAAACATGC
TGAGTTGACCGGATTGGTTTTTCGACCATTTGCACGATTTCAAAGATGTC
AAACATGAACCATGCTGACCCTTCATCTTCCTGACAGAGGAGAGTCCTCG
TTCAGTTCGTGTGGCGGTGCTGCAGGCTGCGTTTCGTTGATTTACAGTCG
GTGTGCCACAGTTTGCCACGGTCCCGAAAAAACAAATAGTAAAAGATATC
GTCTGGGCATATGTAAAAATACAAGGGTTCGTGCAAAAGTTGAAGAAAAC
TCCAGTTAAAAGTGGTGGAGTATTTTCTTCCCTTCGAGCTCACCTTCGTC
CTGATACGTTACATTCGCATGGAAGGGGATAACGTTGTGTACAGGCTCTT
CCCATTTCAGCCCGTAACGGATCAGCTTAAGCTAAGAAAACGTCGTGCCG
AAAAGAGTAAATACGTCGTTTTTTGGACTGTTTGGTTTTTTTTTCAGAGC
ACATCAAAGTCGCGTTGTACGGTCGACGGCTTTGTCGGATAGCTCAAGTA
CCCCGTAGCAGTGAACACTTTAATATCAGGTTAGATTTTCTCTAACTAGT
TGAAATCAATACCCTAGAAGTTGGGCTCCAGCGGTGTAGTGTCGCGCTTG
CGGGGGGATGGAGTGTCGCCAACCCGTTACAGCTACCCAGCCTTGCTGAG
GATGTACTACACTAAAATCATAATGAAACGTAAAATGTCATTACACAAAA
CCACCTCCTGGAAAATGACAAACCCGAACCCTTAGAAAATTCGCGACTCG
AATGCAATGAGTGTTTGCCCGAGTTCAGAGTGTGGGAGCACATAAGATAT
AAAACGTTGACCCCCTGTTTATTCATTGTAGTTTTAATCGGAACATTAAA
AGATTGTCCAGAGCACATAGAATAACCGTGTTCATGCTGAACCTTTAGGC
GAATAGTCGTCAATTTTCGCCGTGAGTGCTCGAGATAGTCGTATTCGTCC
GGGGGTTGCAACAAAGAACACAGCAGCACCTGTACATCGAGTCGGGCTAC
GGTAGGGGGGGGGAGGGAATCGCTGAGCCGCTTTTTTTACCGTGTTGAGC
CACTTTTGGCAGCGGTTTGGCACAATATTTTCTTCCCCTTGAACAGCACG
GTTGTTCCGAATCGTGCGTGGTGCGCGCCTCGAGGGCTGCGTGAACGCTC
GCCATTGACTGCGTCTGAATTGGTTTTGATTCGAGTTTTGTAGAGCTGCT
TCTTGAACTGGCCCTTCGTTAAAGAAGTGGCTCAAAACCTTCATCTCTAC
CGTAGCCCGACTATATTGTCAAACCGAAATCTCGTCCTATGCTTCACCAC
TGACGAAAATGTTGGGCCGAGTGACGACCCCTGCTAGCATGTGCCAGGCC
CTTGATATGAACGCTCAGGTGACTTGCAAGAGATGCAAACCCCCCCACAC
CTCTGTTGTATGTTTGCAGAATTTAAGTGATCGGAGTTGGAGCATGGCCT
CACTAACTGTATGTGTTTCGTGCATTTGAAAGATAGCTACGTCATGATTG
GTTAGTTTCACTCCGCCGCGCTGTAACGTTTCGATGAATACTATCTTCTG
GATTTGAATCCGAGAGGACCAAGAGAAATGCCCTCTTAAATCATCGACAA
ATCTATTGCGTGGATATACACCCAGATATATCAGGAAAATGATGCGATTT
GGCTTCATATCTCTTCAAAATTACGTCAAATAGTTGCGCATTCAAAGGGC
ACAATGAACATACTGACCGAAGAGAGACAATAACAACCAAAGATGGCACA
AAAGGGTTGGGCACCCGAGCTAGCTGTACCCTCGGTTCCATGGTACTTCG
AGTCTGGAAGACTTGCTGAGCTCGTCGCACATCTTTGTGTCACAGCCATG
GTTGCCAAAAACAGAGACACTATCCTCGCCTCTCCAAGACTTTGGGCCAG
TCATTTAGACCCGCAATCAGATACAAATGGCCAAATGCCACAGGCTATAA
GTTGTGCTTCTACAGGCGGTAATGGCAGATGCCTGCCAGTACAGAGGTGT
CGTTTATATTGATATTTTTTTAACAATATCGTTTTGTACTGCTGGAATGT
GCCCGTCGCATTGCTTCTCGGGTGGGGTCAATAATCACTCGAAGCATGGT
GTCGACTCTTTTCCACTCGTATTTTTTAATTTTTCAGAACCCTGCCTAAC
ATACGCCCATTTTCTACCCCCAAACTGACGTTGACGGCCCTTGATGCACG
CCATCCCCCACCCCGCGGTTGTTCTCGTCGATTCGGGGGTACTCACTGTA
TACACGCATGGTGCGCAAATCCATTGGCGCTGACCTGTGTGGGTACGCAA
TATGGGGAACGTTCTCGTCATGAAGATTATACGAAGAGCCGAGACTATAC
GGACTCCACAGCGAGTCTAGACGATAATGTCTCCAAGGCGAACATGGGTT
TGTGTGAAGCAGAACTGGAGATGGAGAGGAAAATTCACCAGGCGTCTGTG
GTTACGGTGATGTCGGACGAGGAGGTTTGCCAGCTCTTTGGTATAGTCCC
CTCTACAGTGGAGACACCCGTGGCGACAGGGGCGGGGGTGGAGGTCGTGG
CGGCGGCGACAGCAGCGGAGGGGGAAGACCTCGGTCGCCAAGGAAACAAA
AATGAAAAGGAGAACGGCGAGGACGACAAGAGAGAGGGGGGCAAGGAAAA
CGAGGAAGACGACCTATCTGTGCTGATCGCAAACCTCATGGTAGAGTTCA
ATGCCGAACTCGAGCGAGTACAGTCAAATTTCAATCGGGAGCTGAGGCGC
ATCAAATGCCGTCATGTGGCAAAGGTTCGAGCGGCTGACGAGCGGTTGTC
GGCGGCTCTAGCGGAGAAAACAATAGCCGAGACCCGTGCCCGGGAGGCCC
AGAAGCTAGTGGAGGTGAGCAAAGGATGAAATTTTGTCCGCTTTTACCGT
ACAGTAAGTGCTTGAAATCACTTGCTTGTCGTCATGGTCTGAGCCGTCCT
CTTACACAAGTTGCGTGTTTGTAAACGATACGCGAGGAGAGGGTATGCCT
TGATGTCTTGAAGAACAGTCGATAGATGGGTGGATGGGAAGTTTGAGCAG
CCCAATTTCCGAATTTTCCAAACGAACCGCATCACAGGCGCATAGTGCCC
ACCAAATTGGCAATATAATCGCTGGTTTCTTGCTTTCAATCAACCGTCGT
TGCTGGAACAACGCAAAGTGGAAAGGCATGCAGTAGGCGGTGGTGATGTC
TGCTGTTCAAGATTAACGAAGCGAAGGTTGGGATGCAGTAGTATGTGCCT
CTAAAATCGCGTAGTCATTCGTACCGTAGATTCTGGCAATCCATGGTCTT
GATGTAATGGTATTCCCTAGAAGTACATCGAATCCAGTCTCGGTCAGCCA
AACCCGAATCGCGCCGCGTATCATTCATTCTTAGTTCTGAACGCTTTCGA
GATGCGGTTCTTTGTGATCTGCGTTGTGATCTCTGCATTTGAGACATTTT
ATGTCATATAATAGAACCTAGGATGCGTCGGACCTCGCGACGCAACCTAT
CGTAGATATATACTTTGGAGACCTAGATCCGCTTTTGTGCTCTCCTTGGG
AACGCTAAAAACATTACTGCTTTTCAATACCAATTGGGCATAAGTCTTGA
ACGATGTTTCGAAGTACCGCGTCCCGGAGGGGTTAATCGGTTGGAAGATA
CTATACTGCGGCAGCCTGAAATGGTCTCAGCAATCGTATCGTTATCTATG
TGATTCGTGCTAATGTGCATAATCCCATGGGATGCTTCACTCAGGCCTCG
GAGAGGGAAAACGAAGAGCTCAAGGCACTACTGGGGCAAATGCAGGAGAC
CAGGTGAGGAGATCGTCCTCGATATATCGTCTGGCAGGTTGGGGTTGTAC
ACTAGGCGTCTCGCTCTCAATCAGCACATGACTGTACAGGGCATAGTTGC
GACGGGGCGATTATTTGCGCTGGTGGACGGGTAATCACACGTGACTATAT
CCAAGAGAAGCGTAATTTTTTTGTTCTCACGTACGTTCTTGGATCTTGCC
CCGACAGTGTAGGTGATGAGCTATGATGGTGTGTCGTATGACTGAGCTAC
CGGGATTTGGGTGTACAGAGCGTTCACGTTGGCTTTTCGTAGGAGTTCCC
GACTAACGGAAGGTTGTTTCGTCAGGTACAGAGGGGTTGTTTGTCTCACG
AGAGAGGATTGACCTGATTGCACAAATTGAAGGTCAAAGAGCAGAGCTAG
AGTGTCGCATAAGTTCAACTTCACCACTACTCACTTGCGTTTTTTCCTTC
CCTACCCGTAGACTGTGTTGCGCAGACTTCGTAGAGGCGGGTATTTATAT
TTCTTTTAGGTTTGATGTTCTGTGGAATAGATACCGTCTTTTTCCAAGGA
ACATAGTGCTGGCAGGGAAATATGTATTTCTTTCTGGCACAGGCAGCAGT
AGAGCTGGGGAACCGAGATCGCGATTTCTAGCAAATACTGTTTTTTTCGG
AGCTGTCGAGTTGTGCGGCATGTTTGGTCTGCATAACGCTATCAAACTAT
GTGCCTACCTAAGCTGTGCTGTGCAGGTGCATGTTTCGTACGAATGACCT
GTACAAGTCTATTTATTTTTCCTCTTGTTGGGAGAATGGAGACGGAAATA
CTTGTCCGAGTTCTCCGAGTACGTACACAAGTACTTCCGTTTTTTGTTTT
ATTTTCAAGGCCAAGAAAAATGGGCCCTCCGTTTAATAATTTTTTACATC
GCTTTGGGACAGAGGACTACATCCCCCGAATATGTCTCGGTTTTGTTGGA
CCACGTTACCTCTTCCAGGGCGCTCCGGGTGCGCACCACCCCCGAAGACG
GGCTAGGCAGGATAACGCGGGTGGCGTCGGCGTCGGCGTCGGCCTCGACC
TCGACCTCGACCTCGACCTCGACCTTTCCCGACCCCATCTCTCCGAGCCT
GGCTGGAGTTGGTCTTCACACCCTCATCCACAAGGAGGTTGAATGTGGAT
CGGGAGTGTGTTTAGAGTGGCGG back to topCoding sequence (CDS) from alignment at H-paniculata_contig8708:723..8195+ >mRNA_H-paniculata_contig8708.16642.1 ID=mRNA_H-paniculata_contig8708.16642.1|Name=mRNA_H-paniculata_contig8708.16642.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1698bp|location=Sequence derived from alignment at H-paniculata_contig8708:723..8195+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTCTCCCGAGGAGAAACTGTTAGTTCAACGATCCAACAAGCGAGATGT
CTCCCGAGGAGAAACTGTTAGTTCAACGATCCAACAAGCGAGATTATACG
AAGAGCCGAGACTATACGGACTCCACAGCGAGTCTAGACGATAATGTCTC
CAAGGCGAACATGGGTTTGTGTGAAGCAGAACTGGAGATGGAGAGGAAAA
TTCACCAGGCGTCTGTGGTTACGGTGATGTCGGACGAGGAGGTTTGCCAG
CTCTTTGGTATAGTCCCCTCTACAGTGGAGACACCCGTGGCGACAGGGGC
GGGGGTGGAGGTCGTGGCGGCGGCGACAGCAGCGGAGGGGGAAGACCTCG
GTCGCCAAGGAAACAAAAATGAAAAGGAGAACGGCGAGGACGACAAGAGA
GAGGGGGGCAAGGAAAACGAGGAAGACGACCTATCTGTGCTGATCGCAAA
CCTCATGGTAGAGTTCAATGCCGAACTCGAGCGAGTACAGTCAAATTTCA
ATCGGGAGCTGAGGCGCATCAAATGCCGTCATGTGGCAAAGGTTCGAGCG
GCTGACGAGCGGTTGTCGGCGGCTCTAGCGGAGAAAACAATAGCCGAGAC
CCGTGCCCGGGAGGCCCAGAAGCTAGTGGAGATTATACGAAGAGCCGAGA
CTATACGGACTCCACAGCGAGTCTAGACGATAATGTCTCCAAGGCGAACA
TGGGTTTGTGTGAAGCAGAACTGGAGATGGAGAGGAAAATTCACCAGGCG
TCTGTGGTTACGGTGATGTCGGACGAGGAGGTTTGCCAGCTCTTTGGTAT
AGTCCCCTCTACAGTGGAGACACCCGTGGCGACAGGGGCGGGGGTGGAGG
TCGTGGCGGCGGCGACAGCAGCGGAGGGGGAAGACCTCGGTCGCCAAGGA
AACAAAAATGAAAAGGAGAACGGCGAGGACGACAAGAGAGAGGGGGGCAA
GGAAAACGAGGAAGACGACCTATCTGTGCTGATCGCAAACCTCATGGTAG
AGTTCAATGCCGAACTCGAGCGAGTACAGTCAAATTTCAATCGGGAGCTG
AGGCGCATCAAATGCCGTCATGTGGCAAAGGTTCGAGCGGCTGACGAGCG
GTTGTCGGCGGCTCTAGCGGAGAAAACAATAGCCGAGACCCGTGCCCGGG
AGGCCCAGAAGCTAGTGGAGGCCTCGGAGAGGGAAAACGAAGAGCTCAAG
GCACTACTGGGGCAAATGCAGGAGACCAGGCCTCGGAGAGGGAAAACGAA
GAGCTCAAGGCACTACTGGGGCAAATGCAGGAGACCAGGGCGCTCCGGGT
GCGCACCACCCCCGAAGACGGGCTAGGCAGGATAACGCGGGTGGCGTCGG
CGTCGGCGTCGGCCTCGACCTCGACCTCGACCTCGACCTCGACCTTTCCC
GACCCCATCTCTCCGAGCCTGGCTGGAGTTGGTCTTCACACCCTCATCCA
CAAGGAGGTTGAATGTGGATCGGGAGTGTGTTTAGAGTGGCGGGGCGCTC
CGGGTGCGCACCACCCCCGAAGACGGGCTAGGCAGGATAACGCGGGTGGC
GTCGGCGTCGGCGTCGGCCTCGACCTCGACCTCGACCTCGACCTCGACCT
TTCCCGACCCCATCTCTCCGAGCCTGGCTGGAGTTGGTCTTCACACCCTC
ATCCACAAGGAGGTTGAATGTGGATCGGGAGTGTGTTTAGAGTGGCGG back to top
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