prot_H-paniculata_contig8701.16639.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig8701.16639.1
Unique Nameprot_H-paniculata_contig8701.16639.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length159
Homology
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BLAST of mRNA_H-paniculata_contig8701.16639.1 vs. uniprot
Match: D7FRI8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRI8_ECTSI)

HSP 1 Score: 55.5 bits (132), Expect = 1.210e-6
Identity = 44/104 (42.31%), Postives = 53/104 (50.96%), Query Frame = 0 
Query:   20 HEIDDDTKTAIPFEVTTCSHDANICMYSNEYFFNDVQGSFDTV------PGTALGTGQRVNLPRPEAYT--IGILPTLIEGQWFDVSEVEIYLDVVDADLVIPA 115
            HE DD T+ +I F                     DV+  +DTV      PGTALG GQRVN+P P+A    + +L  L   Q  DVSEVEIYLDV D D V+ A
Sbjct:   62 HESDDATQLSISF---------------------DVEVGYDTVHTDLTSPGTALGAGQRVNMP-PDASGNYLHLLFDLTSDQAIDVSEVEIYLDVDDPDDVVVA 143
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8701.16639.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FRI8_ECTSI1.210e-642.31Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8701contigH-paniculata_contig8701:209..4456 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8701.16639.1mRNA_H-paniculata_contig8701.16639.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig8701 209..4456 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig8701.16639.1 ID=prot_H-paniculata_contig8701.16639.1|Name=mRNA_H-paniculata_contig8701.16639.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=159bp
MLFFDLGGSFTVSYIMIYIHEIDDDTKTAIPFEVTTCSHDANICMYSNEY
FFNDVQGSFDTVPGTALGTGQRVNLPRPEAYTIGILPTLIEGQWFDVSEV
EIYLDVVDADLVIPAAASYGIVKADTVATVTVDASKWVLDTSSQGGGCGV
SGCDPMLTR
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