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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 3011 |
| Cds size | 306 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig87.16637.1 >prot_H-paniculata_contig87.16637.1 ID=prot_H-paniculata_contig87.16637.1|Name=mRNA_H-paniculata_contig87.16637.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=102bp
MTDQYGLGIVRTLKSFEERVGVNFETSTELPDARNAGWQNDDFNDSVAAR
LDSVLSILSKAGIGKETIVTGGSEDRTDDIAGGDRPPVSRFVENMVDKST
S* back to topmRNA from alignment at H-paniculata_contig87:50448..53555- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig87.16637.1 ID=mRNA_H-paniculata_contig87.16637.1|Name=mRNA_H-paniculata_contig87.16637.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3108bp|location=Sequence derived from alignment at H-paniculata_contig87:50448..53555- (Halopteris paniculata Hal_grac_a_UBK monoicous)
AAAACAACTTTAGGTTTGTACATCCGTGAAAACGTTTGCAAATGCGCTCC
TTCACTACTCCGTATTACGCCTGCCTGCCATGTTTTTCTTTATTCATTTT
CCATTATACAGTCATTTATACCACTGGAACCCCGTTGATCGTAGAGTAAG
CCAAACTAATAACTGTAATTTCTACAGTGCACAAGAAATAAGCATCACTG
GTATTACCTATATGTAACCAACAAGTGAACATCTGAGCGAATAATTGCTT
TACTTTGGATTTAAAAAAAGGACCGTTTCCACGTTTATTTATCTACCCGC
CGACTGCTGTAATTTATTTCTAAATATTTTTTTATCTCATCCCCGCTGCT
GAAAGATGTCCTATACCGAGCTACGGCTCACAAGACCGATCATACATTAC
ATTCCCGTAACGTGCCGGAAATCACTAGTATCCGTCGGTCGTCTTATTTT
TGTCTGCGTGGAATGTGGTTGTTACCCTGAATTATGACAGATCAATATGG
TCTGGGGATTGTGCGCACGCTCAAGAGCTTTGAAGAGAGAGTGGGAGTAA
ATTTTGAAACGTCAACCGAATTGCCCGATGCAAGAAATGCGGGGTGGCAA
AACGACGACTTCAATGACAGCGTAGCAGCGAGGCTGGACAGCGTGCTAAG
CATCCTGAGCAAAGCGGGGATTGGGAAAGAGACGATCGTGACTGGTGGTA
GCGAGGATAGAACTGATGATATCGCAGGTGGCGATAGGCCGCCAGTATCC
CGCTTTGTCGAAAATATGGTTGACAAATCTACGTCATGATGATGATCCAT
GCTTTTCTCGTGCCGACGTGTGACCGGTACAAATACCGGATATATCCCCA
GCACTAGAATCCTGCCCACCATCTTCTTCGCGTACCTAGTGTGCGCTGAG
AAAAAGAAAAACTTATACTTTTCCCGTCGCTTGCTTGATGTATGTTCGGT
ACATGGTAAAATGATGGATACTGATCCATATCATTTGATGCTATCGATTT
ATCACCCGTGTAATTTGTGTCTTTGTTGCAGAGTGCCAACGTTTGCAGCG
AATAAACTTGTCATGTGCACACGGGGAGAGTAGTGGGCTTATTAGCTGGC
ATCAAGAAGCATGCAATAGCATACGCTTTGGCATACGATAGGGGGGAGCA
CGTCATCTGCTTACCTTTACCACCTCAGCACATCCGTGTGCGCGCGTGCG
TGCTCACTTCCGCAGTCGTTGATTCTAGAACATTATACCCACATGTACAA
CGGTAGATACATGAATATATATATATATATATATAGCGAAAAACGTGTAT
ATGAATGTAATAATAGCTAGTACATTGGGTTACGCCAAAGAGGCTAACAC
GCCCCCAAACACAAGCATCGCTCGCGTTAATTCTCCCCCCTCCTTACCCG
TGGAGTGAATGTTGAGCACGATGACCTTGTTCCGCCCCCAAAACCAACGA
CACGGTATTGCGCTTATTATAACGTCGGCACCGTTCCTCTGAAAACCTTG
TACATATTCTCTTTTTCTTCTTTTCCTGTTCCAAATCAACGCCGTTCGTT
CGTTACTATTGTGTTCTTGAAACGCGCGCCTTGTTGTCAACCAAATCATA
CACACTCACGTGCAGGACAGACAGATTGTAGATGCTTCCTTTTGAAAATA
GAGAAACGAACGAGACAACTCGTCAACAGCCAACTACAGTAGTAAAGGTA
CTATGTACACGCTACGCACACCGCTCCACTGACGCTCCTCCACACAATGC
AATGCGAGCACCGTTCACCCCCCACAATCTCTTTACATTGCTCTCAATAT
TTTTACTTCCTTCAACTGAGTATCAAACTTTCGGCGCGTTGCTACAGTAG
AGCTCACTCATGAGATACTACTTCAAGGGTACTACGCAGCGAAGACTCTT
CCCCAGACGGTGGATTTGATTGTTCATTATGCTCGCGACGTTATATATTT
CTATTTTGCAAAATGCGAGCCCAGATTCGAGAAAAAAAACGATGGCAGAA
AAAAAAAAAAAACCTGAAAAAAACACACTTCATCAGATAGACTCTTCGTT
TTCCTTTCCACCCCGGAATATGCAGATATACTCTTCGTACTTAACCCGCT
GTTTCACATCGACCGGATGATGAAGTTATTACGAGCTAAGAGCAAGCAAG
CGCCTGGTCATCGAACAGATCGTTGAGACGTGCTAATATACGAGTTCTTT
CGACAAAAGTAGAGAGAAGTGAGAAATTGCTTCACGACAAAATCGATTTT
AACCACAAAATACGGTTACCTCCACCGCAGCAATCGACACGTGCTTTCAT
CACACACGCAATCAACCGCAGCAAACACTACTCGCTATGTTGTGGTGTGC
GGTGCCCCTCGACAGCGTCGCACAAACATCAGTCCTAACATCATCTTGTG
CGTACACTGGCTGGCAGGACAGAGAGGCGTGACAACAATAACAGTATATG
GCCGCACACACGAAAGGAAACATCGTGACGTCTCCACTACTCTTCTGTAT
AAAAACGTCAACGCGTAGTACGTTGCTCCCACGCGTTGCCGTCCCTTCAC
AAAAAAAAAAATCTTCACGGAAAGATAACCCAATGCAACCATCAGACCGC
ACAACATGCGAGTAATAGGCCACTTAGGATCGAATCAAATTCTCAGAAAA
ACAAAACAAAAAAAAACATCGAAACGAAACGAAGCGAAGCCCCCCGCACA
AAAGACATGGTGGGGGTGATTTTTATCCTTACTCGGGAATCCGAGATAAC
GGCGGCACCAACACGACAACCACGTTAGCATCACAGTGTTACAATCATTT
ATTCCATACATAGCGCTAACATTGGTCACGTTTGAAAACCCAACCAGTTT
TGGACAACGACTACAATTGAATCGAAACAAGGATTCAAAACCCGTGTGAC
AACACCTACCTGGCCCCTCTCTCTCTCTGTGTAAATCATTTGCAGGACAA
GGACACTGCCTCACCCTAAACCATCAATCACGTGAGTGAGTGTGCACTGC
AACCGAAAGTGGTTACAACAAACCCAATACACCTTTTCGTGTTACGCACA
GTCTCTTGGGGGAAGGGGGGGGGGGGGGGGGGGTGCTCATGCTTGCATTC
ATGCTTTG back to topCoding sequence (CDS) from alignment at H-paniculata_contig87:50448..53555- >mRNA_H-paniculata_contig87.16637.1 ID=mRNA_H-paniculata_contig87.16637.1|Name=mRNA_H-paniculata_contig87.16637.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=612bp|location=Sequence derived from alignment at H-paniculata_contig87:50448..53555- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGACAGATCAATATGGTCTGGGGATTGTGCGCACGCTCAAGAGCTTTGA
AGAGAGAGTGGGAGTAAATTTTGAAACGTCAACCGAATTGCCCGATGCAA
GAAATGCGGGGTGGCAAAACGACGACTTCAATGACAGCGTAGCAGCGAGG
CTGGACAGCGTGCTAAGCATCCTGAGCAAAGCGGGGATTGGGAAAGAGAC
GATCGTGACTGGTGGTAGCGAGGATAGAACTGATGATATCGCAGGTGGCG
ATAGGCCGCCAGTATCCCGCTTTGTCGAAAATATGGTTGACAAATCTACG
TCATGAATGACAGATCAATATGGTCTGGGGATTGTGCGCACGCTCAAGAG
CTTTGAAGAGAGAGTGGGAGTAAATTTTGAAACGTCAACCGAATTGCCCG
ATGCAAGAAATGCGGGGTGGCAAAACGACGACTTCAATGACAGCGTAGCA
GCGAGGCTGGACAGCGTGCTAAGCATCCTGAGCAAAGCGGGGATTGGGAA
AGAGACGATCGTGACTGGTGGTAGCGAGGATAGAACTGATGATATCGCAG
GTGGCGATAGGCCGCCAGTATCCCGCTTTGTCGAAAATATGGTTGACAAA
TCTACGTCATGA back to top
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