prot_H-paniculata_contig87.16635.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig87.16635.1
Unique Nameprot_H-paniculata_contig87.16635.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length982
Homology
BLAST of mRNA_H-paniculata_contig87.16635.1 vs. uniprot
Match: D8LJB2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJB2_ECTSI)

HSP 1 Score: 441 bits (1134), Expect = 1.030e-134
Identity = 382/1003 (38.09%), Postives = 487/1003 (48.55%), Query Frame = 0
Query:    2 RDAVVAAARHLSAMEELVASQNNTSALLIAHNGLAKLLKGRWPWLVGGVLDAPRLLAQLCSIYGDGLSQLKVALAQADAKRAGGSLPDGSGSGTVAAAAAGEVAHLKKFGKLLATFGARMSCLLRHLGPECAPEDRRQAYILFAQAAAVVYPGF-ESLTSRE--AKNAGSRGSPATPSLARVVADVVYPRAVEALLSAAGPPPCCPGECRCGVEKKTEGGLGSEESPPAPGVAV---------SAESADVENGVGRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGVGVPSERFSLGAILLLCEAVRC---EETRLSKSVSLRLGEYCRWMLDHLSITFPSWVETAAARNRAGVGGDGSSWSERERVVRALCQEAAAALGCYVSRRAVQGDFEEAQLQMLEGCSCYPHPLCREIWCGALKVFIGRCDAVAQESVVQTFTEAALDPRVSCQGRRRLAHALHALTLPQSSGGLSTSSGNTDVTAGNDTSTAVATVGLLCPSAEALLRRFCLAPLLAVHVSPRSPHGTLTTIGSTNSGGLGEGEERGACALDLLRELRCLLAATDTIAASAAGLSTTVKAGEERGADAALADASTTFAKNVLMAC--LRDDARTGHSSGGAREDSRGNGCYNTAGDHVPGLGGAGQKA---MTAATTFLTASAAAPAAALPSEGGKIMKDAPATRRIWPRELPDVAAAKEIGRSFGAVLMSKRVLEFTRLSERALAASVGLLVKTDTGSLPQLCAWIVESAGEGQVTGAGLLALAKGLSCLG-RQSSPVKA----VGASALETVLTDGFVGLFNAGLWPVTTSAMQALEAMARHADPRTAKLLPKLVPQDRLGAFKARLARRMVTLEGSRPVELTKIREHGILERHILTAAAARASSQLAALPVGEHDQGGRVLKRNQNGSVGGRQRQVVVLREGSDVSAMAGLLSSTIARIEVLSEDAGGGIRITM 979
            RDAVV AA HL+AME+LV  QNNT ALL+AHN LAKLLK  WPWLVGGV+DAPRLL++LC IY DGL QLK+ALAQADAK A  S  + S     A   AG+ AHLKKFGKLLATFG RM+CLLRHLGPEC P +RR A+ L+A+A A VYPG   SL +R+    +A + G         V   ++YP+AVEA +S    PPCC    + GV     G  GS  SPP     V         S  +     GV                                          XXXXXXXX                             S V        LGA+LLLCE +R           +   R    C W+LDHL+  FP WV++AA                      AL  E +A LG +V RRA+ G+F+EAQ+Q++EGCSC+PHP+CRE+W GALKVF+GRCD+ AQE+ +Q+ T AALDPRVS + RRRL  AL A+ +  ++G     SG+   T G   S AV    LL P A A L + CL+ L    +   S   +                   ACALDLLR L            S    S     G +   D  L  AS +FA+        LR +A  G                   G+H PG     ++    + A   FL        AA P +  K    A         E    AAA+E+ R  G +L S  +     LSERAL+A   L+ + D   LPQLC+ +   A +G+V G  +LALA+GLS +G RQ  P K     +G + LE        G     L  V         A+AR  DP    LLP+ +P+ RL AFK RL RR V L+G  P++L +IRE G+ E  +L+AAA      LAA             KR    S G  Q + +VL+EG D+SA+AGLL++T+  I +LSE  GGG+ +T+
Sbjct:  149 RDAVVLAAGHLTAMEQLVTRQNNTPALLMAHNALAKLLKNNWPWLVGGVVDAPRLLSRLCEIYRDGLDQLKIALAQADAKHAA-SGEEHSCVNRSAGGGAGDTAHLKKFGKLLATFGTRMACLLRHLGPECPPRERRAAFRLYAKATASVYPGLLASLRARDFVGDDAATAGG--------VAGCIIYPKAVEAFVSTTDEPPCC----QSGVSATGRGENGSR-SPPTSSRKVGPLVDAGGSSCAAFSSAGGVAERERNLRPSCRCYEGTTTGPLSGRRHDPWEALEALRPTPNRXXXXXXXXIADPSRTSSRSSDASAATDDSRDAVHEPESSVD------PLGAVLLLCEFLRRGYGTAPAAGGARGPRREACCAWVLDHLAALFPGWVDSAAXXXXXXXX-----------XXXALTGEVSATLGVFVCRRAMDGEFQEAQVQLIEGCSCHPHPVCREVWVGALKVFLGRCDSAAQEACIQSLTNAALDPRVSRRCRRRLGRALAAVCVAMTTGVPLADSGSP--TGGPSASAAVP---LLLPRARAGLFQACLSRLRGEQLDEDSSGDSSIRASGGRXXXXXXXXXXXACALDLLRALP-----------SWRSFSGVNGGGHD---DEELTAASASFARTSATTADLLRSEAARG-----------------VRGEHSPGSSLRQREEEDNLVAGARFL--------AARPQQERKQAAGAEVDMG-GEAEGGLGAAAREVARELGGMLTSSGLSG--GLSERALSAITRLVAREDPDRLPQLCSVVAREAVDGRVGGEAVLALAEGLSSVGQRQPLPSKGRAGNIGFNRLEECPPRWVRGTLRFSL--VARRHGSHGNAVARCVDPSITALLPRQIPEHRLAAFKGRLGRRTVYLDGGGPIKLEEIRERGLAETRVLSAAAVA----LAA-------------KRGTTESEG--QTRQIVLKEGGDLSALAGLLANTVTGIRLLSEREGGGVCLTL 1052          
BLAST of mRNA_H-paniculata_contig87.16635.1 vs. uniprot
Match: A0A6H5JIM5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIM5_9PHAE)

HSP 1 Score: 324 bits (831), Expect = 2.760e-93
Identity = 243/600 (40.50%), Postives = 302/600 (50.33%), Query Frame = 0
Query:    2 RDAVVAAARHLSAMEELVASQNNTSALLIAHNGLAKLLKGRWPWLVGGVLDAPRLLAQLCSIYGDGLSQLKVALAQADAKRAGGSLPDGSGSGTVAAAAAGEVAHLKKFGKLLATFGARMSCLLRHLGPECAPEDRRQAYILFAQAAAVVYPGFESLTSREAKNAGSRGSPATPSLARVVADVVYPRAVEALLSAAGPPPCCPGECRCGVEKKTEGGLGSEESPP-----APGVAVSAESADVENGVGRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGVGVPSERFSLGAILLLCEAVRC---EETRLSKSVSLRLGEYCRWMLDHLSITFPSWVETAAARNRAGVGGDGSSWSERERVVRALCQEAAAALGCYVSRRAVQGDFEEAQLQMLEGCSCYPHPLCREIWCGALKVFIG----RCDAVAQESVVQTFTEAALDPRVSCQGRRRLAHALHALTLPQSSGGLSTSSGNTDVTAGNDTSTAVATVGLLCPSAEALLRRFCLAPLLAVHVSPRSPHGTLTTIGSTNSGGLGEGEERGACALDLLREL 589
            RDAVV AA HL+AME+LV  QNNT ALL+AHN L+KLLK  WPWLVGGV+DAPRLL++LC IY DGL QL +ALAQADAK A  S    SG+ + A   AG+ AHLKKFGKLLATFG RM+CLLRHLGPEC P  RR+A+ L+A+A A VYPG   L S  A++     +  T  +A  +   +YP+AVEA LS    PPCC    + GV     G   S   P      +P V     S    +  GR                                                                             S   V      LGA+LLLCE +R           +   R    C W+LDHL+  FP WV++AA     G GG G + +       AL  E +A LG  V RRA+ G+F+EAQ+Q++EGCSC+PHP+CRE+W GALK         CD  AQE  +Q+   AALDPRVS + RRRL  AL A+ +  ++G   T SG+    AG  T++A A   LL P A A L + CL+ L    +   S  G  +   S             ACALDLLR L
Sbjct:  143 RDAVVLAAGHLTAMEQLVTRQNNTPALLMAHNALSKLLKNNWPWLVGGVVDAPRLLSRLCEIYRDGLGQLDIALAQADAKNAASSEEPRSGNRS-AGGGAGDTAHLKKFGKLLATFGTRMACLLRHLGPECRPRKRREAFRLYAKATASVYPGL--LASLRARDVVGDDATTTGGVAGCI---IYPKAVEAFLSTTDEPPCC----QSGVSAIGHGENASRSPPTNSRKASPLVDAGGSSCAAFSSAGRVAERERNLRRSCRCYEGATTGPLSGQRHDPWEALEALRPPNRPPLITDPTRTSSRSSDSSTATDDSRDAAHDLQ---SSPAVDP----LGAVLLLCEFLRRGYGAAPAAGGARGPRRETCCAWVLDHLAALFPGWVDSAA-----GGGGQGGASA-------ALAGEVSATLGVVVCRRAMDGEFQEAQVQLIEGCSCHPHPVCREVWVGALKGKTDAGWKECDPAAQEVCIQSLANAALDPRVSPRCRRRLGRALAAVCVATTTGAPPTDSGSP---AGGPTASAAAP--LLLPRARAGLFQACLSRLRGEQLDGDSS-GDSSIRASGXXXXXXXXXXXXACALDLLRAL 707          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig87.16635.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LJB2_ECTSI1.030e-13438.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JIM5_9PHAE2.760e-9340.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig87contigH-paniculata_contig87:24988..32924 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig87.16635.1mRNA_H-paniculata_contig87.16635.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig87 24778..32929 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig87.16635.1 ID=prot_H-paniculata_contig87.16635.1|Name=mRNA_H-paniculata_contig87.16635.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=982bp
MRDAVVAAARHLSAMEELVASQNNTSALLIAHNGLAKLLKGRWPWLVGGV
LDAPRLLAQLCSIYGDGLSQLKVALAQADAKRAGGSLPDGSGSGTVAAAA
AGEVAHLKKFGKLLATFGARMSCLLRHLGPECAPEDRRQAYILFAQAAAV
VYPGFESLTSREAKNAGSRGSPATPSLARVVADVVYPRAVEALLSAAGPP
PCCPGECRCGVEKKTEGGLGSEESPPAPGVAVSAESADVENGVGRAGEGG
SEGISGCDCCRCYHSSDSEMAEEEDGSLGGSRRRQRRQHHDPSEALEALH
PGQPPQPAPHANSGGLGGSEGASGVGVPSERFSLGAILLLCEAVRCEETR
LSKSVSLRLGEYCRWMLDHLSITFPSWVETAAARNRAGVGGDGSSWSERE
RVVRALCQEAAAALGCYVSRRAVQGDFEEAQLQMLEGCSCYPHPLCREIW
CGALKVFIGRCDAVAQESVVQTFTEAALDPRVSCQGRRRLAHALHALTLP
QSSGGLSTSSGNTDVTAGNDTSTAVATVGLLCPSAEALLRRFCLAPLLAV
HVSPRSPHGTLTTIGSTNSGGLGEGEERGACALDLLRELRCLLAATDTIA
ASAAGLSTTVKAGEERGADAALADASTTFAKNVLMACLRDDARTGHSSGG
AREDSRGNGCYNTAGDHVPGLGGAGQKAMTAATTFLTASAAAPAAALPSE
GGKIMKDAPATRRIWPRELPDVAAAKEIGRSFGAVLMSKRVLEFTRLSER
ALAASVGLLVKTDTGSLPQLCAWIVESAGEGQVTGAGLLALAKGLSCLGR
QSSPVKAVGASALETVLTDGFVGLFNAGLWPVTTSAMQALEAMARHADPR
TAKLLPKLVPQDRLGAFKARLARRMVTLEGSRPVELTKIREHGILERHIL
TAAAARASSQLAALPVGEHDQGGRVLKRNQNGSVGGRQRQVVVLREGSDV
SAMAGLLSSTIARIEVLSEDAGGGIRITMDT*
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