prot_H-paniculata_contig87.16634.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig87.16634.1
Unique Nameprot_H-paniculata_contig87.16634.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length364
Homology
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BLAST of mRNA_H-paniculata_contig87.16634.1 vs. uniprot
Match: A0A6H5JMZ4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JMZ4_9PHAE)

HSP 1 Score: 184 bits (468), Expect = 1.360e-51
Identity = 125/307 (40.72%), Postives = 170/307 (55.37%), Query Frame = 0 
Query:   61 ELFRCEREEDLDGSSCRVDMLPDAGLAEMIYERGFDPEGATRMELMDAAMQLLDYEYATGENLREMEFLPGDDAYAADYEQELAAEQLLKEQEAVELSPKPESEATTTTANIDVADISDNSSVTVDGEGDVGGTMVLGSDE-VGDENGG------EVVDDFGGETGVQE---------------GRIVEGLGSADTVIGYAQELGIEVLKTMKRDLNAVVGLLPDPVAKPIREVASVACDTAVRVVHPALKQAERYTRGFRREAMKSAGRLATRVKKDFGPKALRSIATGFSKAKEGLSKAIQGTRQ 345
            E FRCE EEDLDGS+CRVDMLPD+ LAEM+YERGFDP+GA R++L+DA MQLLDYEYATGE+LREME++P D + AA      AAE    + E                               ++ E    G     +D   G E+GG      E  DD      ++E               G  V   G + T++GYA  L  EVL+TM+RDLN++VG+LP+P+ +P+RE A+   +TA R V PA+++AERYTRG RR A K+AG+    +K +  P+    ++   S AK  +  AI   ++
Sbjct:   43 EAFRCESEEDLDGSACRVDMLPDSALAEMVYERGFDPDGADRLQLLDAVMQLLDYEYATGEDLREMEYIPDDGSAAA------AAETAAADLEXXXXXXXXXXXXXXXXXXXXXXXXGTRGEEGLEEEHGAAGREDGDADSPAGVESGGVGNDEEEASDDAIAREVIEECTSSSVTSSCPVGGRGEEVAAYGES-TLLGYAHGLATEVLRTMRRDLNSLVGMLPEPLERPVREAAAFVGNTATRFVGPAVQKAERYTRGLRRGAGKTAGKAVMALKDEVLPRVWTGVSRAASNAKRRVEDAIAARKE 342
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig87.16634.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JMZ4_9PHAE1.360e-5140.72Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig87contigH-paniculata_contig87:21020..23913 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig87.16634.1mRNA_H-paniculata_contig87.16634.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig87 20997..24617 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig87.16634.1 ID=prot_H-paniculata_contig87.16634.1|Name=mRNA_H-paniculata_contig87.16634.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=364bp
MQAGDGYRMERSRFPCGRHPALMSGRYIRTNEKVSLLKVLRVTTGIMAAV
LSSCVPVDGAELFRCEREEDLDGSSCRVDMLPDAGLAEMIYERGFDPEGA
TRMELMDAAMQLLDYEYATGENLREMEFLPGDDAYAADYEQELAAEQLLK
EQEAVELSPKPESEATTTTANIDVADISDNSSVTVDGEGDVGGTMVLGSD
EVGDENGGEVVDDFGGETGVQEGRIVEGLGSADTVIGYAQELGIEVLKTM
KRDLNAVVGLLPDPVAKPIREVASVACDTAVRVVHPALKQAERYTRGFRR
EAMKSAGRLATRVKKDFGPKALRSIATGFSKAKEGLSKAIQGTRQGKDGQ
GESNGGSEPEEDA*
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