mRNA_H-paniculata_contig8692.16630.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig8692.16630.1 vs. uniprot
Match: D8LQ91_ECTSI (Lipase_3 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ91_ECTSI) HSP 1 Score: 123 bits (309), Expect = 4.360e-30 Identity = 70/126 (55.56%), Postives = 81/126 (64.29%), Query Frame = 1
Query: 31 DFAGGSAHEGISKSALAVWYSAKDLVEGLLREHEDYRLVLTGHSLGAGTAILLKLLFSTKDGGVVTAGKVDGAAEVAAAAVTEGRSQLALDAGRPVHVECFAFAPPPVFSGEGTADMPDMYSFVNG 408
DFAGG AH+GIS+SA+ VW + + VE LREH DY+LVLTGHSLGAGTAILLK+L + G + AA LD GRPV VEC+AFAPPPVFS G M D+YSFVNG
Sbjct: 235 DFAGGKAHQGISQSAVRVWTAVRGEVEKQLREHSDYKLVLTGHSLGAGTAILLKILLERNAMEALKGGFRLAKDKTAA-------KTARLDVGRPVRVECYAFAPPPVFSVPGATWMRDVYSFVNG 353
BLAST of mRNA_H-paniculata_contig8692.16630.1 vs. uniprot
Match: A0A7S4BYQ8_CHRCT (Hypothetical protein (Fragment) n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BYQ8_CHRCT) HSP 1 Score: 68.2 bits (165), Expect = 1.030e-10 Identity = 49/118 (41.53%), Postives = 62/118 (52.54%), Query Frame = 1
Query: 34 FAGGSAHEGISKSALAVWYSAKDLVEGLLREHEDYRLVLTGHSLGAGTAILLKLLF----STKDG-----GVVTAGKVDGAAEVAAAAVTEGRSQLALDAGRPVHVECFAFAPPPVFS 360
F GG AH G++ A AVW A V L ++ +YRL++TGHSLGAGTA+LL LL S + G V+ K D +A+ T L V + CF FAPPPVFS
Sbjct: 194 FCGGRAHSGMADMARAVWVEAGHAVLKELDKYPNYRLIITGHSLGAGTALLLNLLLHELRSPQQGVKCLEWVLNKSKPDKQGSNSASEPTA--VPLPXXXXXRVAIRCFGFAPPPVFS 309
BLAST of mRNA_H-paniculata_contig8692.16630.1 vs. uniprot
Match: A0A7S4F9Q7_CHRCT (Hypothetical protein (Fragment) n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4F9Q7_CHRCT) HSP 1 Score: 68.2 bits (165), Expect = 1.050e-10 Identity = 49/118 (41.53%), Postives = 62/118 (52.54%), Query Frame = 1
Query: 34 FAGGSAHEGISKSALAVWYSAKDLVEGLLREHEDYRLVLTGHSLGAGTAILLKLLF----STKDG-----GVVTAGKVDGAAEVAAAAVTEGRSQLALDAGRPVHVECFAFAPPPVFS 360
F GG AH G++ A AVW A V L ++ +YRL++TGHSLGAGTA+LL LL S + G V+ K D +A+ T L V + CF FAPPPVFS
Sbjct: 242 FCGGRAHSGMADMARAVWVEAGHAVLKELDKYPNYRLIITGHSLGAGTALLLNLLLHELRSPQQGVKCLEWVLNKSKPDKQGSNSASEPTA--VPLPXXXXXRVAIRCFGFAPPPVFS 357
BLAST of mRNA_H-paniculata_contig8692.16630.1 vs. uniprot
Match: A0A1Z5KQY0_FISSO (Lipase_3 domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KQY0_FISSO) HSP 1 Score: 67.8 bits (164), Expect = 1.520e-10 Identity = 44/109 (40.37%), Postives = 57/109 (52.29%), Query Frame = 1
Query: 34 FAGGSAHEGISKSALAVWYSAKDLVEGLLREHEDYRLVLTGHSLGAGTAILLKLLFSTKDGGVVTAGKVDGAAEVAAAAVTEGRSQLALDAGRPVHVECFAFAPPPVFS 360
F GG AH ++ A VW +A++ V +LR +E+Y LVLTGHSLGAGTA LL +L + +V EGR+ V CFA+A PPVFS
Sbjct: 353 FCGGEAHAEMANMAERVWEAARETVMKVLRSNENYELVLTGHSLGAGTACLLHILCHQDERKLV-----------------EGRN-----------VRCFAYATPPVFS 433
BLAST of mRNA_H-paniculata_contig8692.16630.1 vs. uniprot
Match: A0A7S0UIT3_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UIT3_9STRA) HSP 1 Score: 64.7 bits (156), Expect = 1.650e-9 Identity = 40/115 (34.78%), Postives = 59/115 (51.30%), Query Frame = 1
Query: 34 FAGGSAHEGISKSALAVWYSAKDLVEGLLREHEDYRLVLTGHSLGAGTAILLKLLFSTKDGGVVTAGKVDGAAEVAAAAVTEGRSQLALDAGRPVHVECFAFAPPPVFSGEGTAD 378
F GG AH ++ +A +W A + V LL E+ +Y L++TGHSLGAG A+L+ +L + + A+D GRP+ CFAF+ PPVF+G+ D
Sbjct: 160 FCGGEAHSEMANAAEKIWGEAGETVTKLLFENPEYELIVTGHSLGAGAAVLVNILLHQNN-------------------------REAVD-GRPIR--CFAFSSPPVFAGDVAKD 246
BLAST of mRNA_H-paniculata_contig8692.16630.1 vs. uniprot
Match: A0A7S2TJX1_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TJX1_9EUKA) HSP 1 Score: 61.2 bits (147), Expect = 2.930e-8 Identity = 45/127 (35.43%), Postives = 64/127 (50.39%), Query Frame = 1
Query: 40 GGSAHEGISKSALAVWYSAKDLVEGLLREHEDYRLVLTGHSLGAGTAILLKLLFSTKDGGVVTAGKVDGAAEVAAAAVTEGR-SQLALDAGRPVHVECFAFAPPPVFSGEGTADMP---DMYSFVNG 408
GG AH+GI +SA AV + +LR+H ++LV+TGHSLG G A++L LL + A +GR +L LD V +E +AF PPPVF+ +Y+FV+G
Sbjct: 287 GGVAHDGILRSAFAVLGHVSARLVEILRDHPGFKLVVTGHSLGGGVALVLALLL-----------------KAAQEQDRDGRIPKLPLD----VLIEAYAFGPPPVFTPLSELKQEWQQGIYTFVHG 392
BLAST of mRNA_H-paniculata_contig8692.16630.1 vs. uniprot
Match: A0A7S1HE54_HEMAN (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1HE54_HEMAN) HSP 1 Score: 59.7 bits (143), Expect = 7.980e-8 Identity = 29/54 (53.70%), Postives = 37/54 (68.52%), Query Frame = 1
Query: 34 FAGGSAHEGISKSALAVWYSAKDLVEGLLREHEDYRLVLTGHSLGAGTAILLKL 195
F GG AH G++ SA+A+W + V LL +H+ Y L L GHSLGAGTA+LL L
Sbjct: 257 FCGGVAHRGVAASAVALWETVGPKVLALLGDHKGYELRLAGHSLGAGTALLLHL 310
BLAST of mRNA_H-paniculata_contig8692.16630.1 vs. uniprot
Match: A0A812SBL0_SYMPI (DAGLA protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812SBL0_SYMPI) HSP 1 Score: 58.9 bits (141), Expect = 1.820e-7 Identity = 44/128 (34.38%), Postives = 59/128 (46.09%), Query Frame = 1
Query: 28 PDFAGGSAHEGISKSALAVWYSAKDLVEGLLREHEDYRLVLTGHSLGAGTAILLKLLFSTKDGGVVTAGKVDGAAEVAAAAVTEGRSQLALDAGRPVHVECFAFAPPPVFSGEGTADMP--DMYSFVN 405
P+ G AH+ + SA AV + + LRE+ Y LV+TGHSLGAGTAIL +L S A + R +L CFAFAPPPV T + +++SF+N
Sbjct: 218 PECPGLHAHKAMLASARAVLERTRPALNEALRENPGYSLVVTGHSLGAGTAILCTVLLSV--------------------AQLDSRPRLT----------CFAFAPPPVVGPLSTRSLSALEIHSFIN 315
BLAST of mRNA_H-paniculata_contig8692.16630.1 vs. uniprot
Match: A0A7S0DSP5_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DSP5_9EUKA) HSP 1 Score: 58.5 bits (140), Expect = 2.170e-7 Identity = 43/126 (34.13%), Postives = 65/126 (51.59%), Query Frame = 1
Query: 40 GGSAHEGISKSALAVWYSAKDLVEGLLREHEDYRLVLTGHSLGAGTAILLKLLFSTKDGGVVTAGKVDGAAEVAAAAVTEGRSQLALDAGRPVHVECFAFAPPPVFS---GEGTADMPDMYSFVNG 408
GG AH+GI +SA AV SA+D + L ++ YRLV+TGHSLGAG +I+ LL + ++ G+ G L ++ + FAF+PPP+F+ A M+ F++G
Sbjct: 68 GGYAHDGIVRSAFAVLSSAEDAIIESLSKNPGYRLVITGHSLGAGVSIMASLL--------LLKARIHGS--------FPGVPTLPKES----EIHTFAFSPPPLFTPLWALSDAMTEHMHVFIHG 173
BLAST of mRNA_H-paniculata_contig8692.16630.1 vs. uniprot
Match: A0A7S1Z4F0_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z4F0_TRICV) HSP 1 Score: 56.2 bits (134), Expect = 2.470e-7 Identity = 47/112 (41.96%), Postives = 63/112 (56.25%), Query Frame = 1
Query: 49 AHEGISKSALAVWYSAKDLVEGLLRE-HEDYRLVLTGHSLGAGTAIL--LKLLFSTKDGG----VVTAGKVDGAAEVAAAAVTEGRSQLALDAGRPVHVECFAFAPPPVFSG 363
AHEGI+++ +AV SA + L E E+Y + LTGHSLGAGTA + L+LL + GG V+ G + A A E + AL A V+C+A+APPPVF G
Sbjct: 18 AHEGIARAGIAVLRSALPSMAAALEECGEEYGVTLTGHSLGAGTATMCALELLAARARGGGDDEVLPPFWGKGEDDDADA---EAKLASALRAVASRDVDCWAYAPPPVFLG 126 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8692.16630.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig8692.16630.1 >prot_H-paniculata_contig8692.16630.1 ID=prot_H-paniculata_contig8692.16630.1|Name=mRNA_H-paniculata_contig8692.16630.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=137bp MAKRRARAAPDFAGGSAHEGISKSALAVWYSAKDLVEGLLREHEDYRLVLback to top mRNA from alignment at H-paniculata_contig8692:8207..9769+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig8692.16630.1 ID=mRNA_H-paniculata_contig8692.16630.1|Name=mRNA_H-paniculata_contig8692.16630.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1563bp|location=Sequence derived from alignment at H-paniculata_contig8692:8207..9769+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig8692:8207..9769+ >mRNA_H-paniculata_contig8692.16630.1 ID=mRNA_H-paniculata_contig8692.16630.1|Name=mRNA_H-paniculata_contig8692.16630.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=822bp|location=Sequence derived from alignment at H-paniculata_contig8692:8207..9769+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |