mRNA_H-paniculata_contig859.16548.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig859.16548.1
Unique NamemRNA_H-paniculata_contig859.16548.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig859.16548.1 vs. uniprot
Match: D8LJ11_ECTSI (Kinesin motor domain-containing protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ11_ECTSI)

HSP 1 Score: 880 bits (2273), Expect = 2.040e-305
Identity = 513/692 (74.13%), Postives = 557/692 (80.49%), Query Frame = 1
Query:  802 RYAFDYVFDVSATQKAVYENTTKFLIQGVLDGFNATVFAYGCTGAGKTYTMIGNDQEGHQGIMYLTLQDLFKQQRKASEVQGRHYAVTVSFLEVYNENIRDLLNDTGEFLDLREDPIKGPTVSGLAEVEARTPEEIMDLLHQGNQSRTQQATRANAVSSRSHAVLQARRGVVVESREKAPGTVATMHVGKLSLVDLAGSERAAATQNRGVRLVEGANINRSLLALGNCINALGEKGNRGQFVPYRDSKLTRLLKDSLGGNCRTVMIANISGASSSFEETLNTLKYANRAKNIKTNATRNSLDVNHHISEYVNLIGSLRTEIARLKHQL----RQPEPRRVRTCSHGAAHTRTCSCIVLPSMELT--ALLGRSDSHFRQLSCLHCAKVSSSSTKAKANSMFANDKEQRKLTPCNSNAVVVPGLD-GAMSTAEGEEGNVGIGAG-------------RVVEISNSSSSMCTYDIAEEGSLQDRDFVEEVREKIVENFRERMQLRRSLIELEDQNVQNSIEASDQYVGKRQLSLVEWHNGRRLPQEVANDALQGLTRHGGWAEAVAAAAEAAASGGFWRGEATDEQDDKRASHSPPSEVRMAWRECEQLSSAISKNNEIKRKISRRLRNNSRQAEKLKSNLDGKMTGEDRNQLMKLQYRIGKLELDNMELEQSRIVHESAMRGKDLTIQKLQLQV 2817
            RYAFDYVFD +ATQ+AVYENTTKFLIQGV+DG+NATVFAYGCTGAGKTYTMIGN QEGHQGIM LTLQDLFKQQR+ASEVQGR Y+VTVSFLEVYNENIRDLLNDTGEFLDLREDPIKGPTVSGLAEVEARTPEEIMDLLHQGNQSRTQQATRANA SSRSHAVLQ    VVVESR+KAPGTVATMH+GKLSLVDLAGSERAAATQNRGVRLVEGANINRSLLALGNCINALGE+GN+GQFVPYRDSKLTRLLKDSLGGNCRTVMIANISGASSSFEETLNTLKYANRAKNIKTNATRNSLDVNHHISEYVNLIGSLRTEI RLKHQL    R            G   +R+ + +  PS++ +  +L   +D   ++L      +++ SS +A    +  +     KLT   ++   V G+D GA S  E  +G  G G               R    S+   SM   + A   S QDRDFVEEVREKIVENFRERMQLRRSLIELEDQNVQNSIE     VGKRQLSLVEWH GRRLPQE A+DAL+GLTRHGGWAEAVA AAEAAA+GG  RG       D      PP EVR+AWRECEQL SAISKNNE KRKISRRLRNN RQAE+ K++LDGK+TGEDRNQLM+LQYRIGKLELDNMELEQSRIVHESAMRGKDLTI+KLQLQ+
Sbjct:   19 RYAFDYVFDATATQRAVYENTTKFLIQGVVDGYNATVFAYGCTGAGKTYTMIGNGQEGHQGIMVLTLQDLFKQQRRASEVQGRRYSVTVSFLEVYNENIRDLLNDTGEFLDLREDPIKGPTVSGLAEVEARTPEEIMDLLHQGNQSRTQQATRANAASSRSHAVLQ----VVVESRDKAPGTVATMHIGKLSLVDLAGSERAAATQNRGVRLVEGANINRSLLALGNCINALGERGNKGQFVPYRDSKLTRLLKDSLGGNCRTVMIANISGASSSFEETLNTLKYANRAKNIKTNATRNSLDVNHHISEYVNLIGSLRTEITRLKHQLVRGGRSGGGVGTGAGGDGVGSSRSEAMVFSPSLKASTNSLFAPADDEQQELRGSRGKEITGSSERASL-LLSPSSSPSAKLT---NDVGSVGGVDAGAGSMMEAVDGAAGSGTSSRNGIDLAMVAGVRDAPASSPPVSMADGEGAVVSSPQDRDFVEEVREKIVENFRERMQLRRSLIELEDQNVQNSIE-----VGKRQLSLVEWHGGRRLPQEAASDALRGLTRHGGWAEAVAEAAEAAAAGG--RG-------DGSIISPPPPEVRVAWRECEQLCSAISKNNETKRKISRRLRNNGRQAERFKADLDGKITGEDRNQLMRLQYRIGKLELDNMELEQSRIVHESAMRGKDLTIEKLQLQL 688          
BLAST of mRNA_H-paniculata_contig859.16548.1 vs. uniprot
Match: A0A6H5L427_9PHAE (Kinesin motor domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L427_9PHAE)

HSP 1 Score: 788 bits (2035), Expect = 9.020e-262
Identity = 563/1101 (51.14%), Postives = 642/1101 (58.31%), Query Frame = 1
Query:    1 DGDHGRPSSSGGRLEQHLGAVESVEITSPTATGGIIPSTQSFGGISVLGFPS---------------AKASGRSGVRGAAETPSRSS-------------NNNGGSTLTSRIAAG-------FANKKTSDV-------VVQGGSVGGYGRRPRQRIGGKRWSAEQVLLGAGSSAAMGG---RGKIDGRKTRPRQRAGSQPGFSSTVDDGDGAG-------------GGDTGDRGNGDLGGERRAPGAGRGGRAEGCHTGTADHKFRMQAGQSNTLVAVRLRPLLKHDREQVEVAKVLDNKVIVLMDPAKVNQEIDPLRVNRTREKR----------------YAFDYVFDVSATQKAVYENTTKFLIQGVLDGFNATVFAYGCTGAGKTYTMIGNDQEGHQGIMYLTLQDLFKQQRKASEVQGRHYAVTVSFLEVYNENIRDLLNDTGEFLDLREDPIKGPTVSGLAEVEARTPEEIMDLLHQGNQSRTQQATRANAVSSRSHAVLQA---RRGVVVESREKAPGTVATM-------HVGKLSL--VDLAGSERAAATQNRGVRLVEGANINRSLLALGNCINALGEKGNRGQFVPYRDSKLTRLLKDSLGGNCRTVMIANISGASSSFEETLNTLKYANRAKNIKTNATRNSLDVNHHISEYVNLIGSLRTEIARLKHQL----RQPEPRRVRTCSHGAAHTRTCSCIVLPSMELT--ALLGRSDSHFRQLSCLHCAKVSSSSTKAKA--------NSMFAND--KEQRKLTPCNSNAVVVPGLDGAMSTAEGEEGNVGIGAGRVVEISNSSSSMCTYDIAEEGSLQDRDFVEEV------------------------------------------------------------REKIVENFRERMQLRRSLIELEDQNVQNSIEASDQYVGKRQLSLVEWHNGRRLPQEVANDALQGLTRHGGWAEAVAAAAEAAASGGFWRGEATDEQDDKRASHSPPSEVRMAWRECEQLSSAISKNNEIKRKISRRLRNNSRQAEKLKSNLDGKMTGEDRNQLMKLQYRIGKLELDNMELEQSRIVHESAMRGKDLTIQKLQLQV 2817
            D +  RPSSSGGRLEQHLGAVE V++  P     ++PS         L FP+               A A G   VRG      R +             +++GG++  S  +          + K+TSD                   RR    +G +   AE    G   S A GG   RG  DG K RPR R  SQ  F  +V +G                 GG+ G+         RRA              GT D+KFRMQAGQSNTLVAVRLRPLLKHDRE VEVAKVLD++V+VLMDPAKVNQE+DPLRVNRTREKR                YAFDYVFD +ATQ+AVYENTTKFLIQGV+DG+NATVFAYGCTGAGKTYTMIGN QEGHQGIM LTLQDLFKQQR+     GR Y+VTVSFLEVYNENIRDLLNDTGEFLDLREDPIKGPTVSGLAEVEARTPEEIMDLLHQGNQSRTQQATRANA SSRSHAVLQ     R + V +    P T   M       H GK +L       + RAAATQNRGVRLVEGANINRSLLALGNCINALGE+GN+GQFVPYR                         GASSSFEETLNTLKYANRAKNIKTNATRNSLDVNHHISEYVNLIGSLRTEI RLK QL    R            G   +R+ + +  PS++ +  +L   +D   ++L      +++ SS +A          ++  AND  +         S   VV G  G+ +++        +   R   +++   SM   + A   S QD+DFVEEV                                                            REKIVENFRERMQLRRSLIELEDQNVQNSIE          +++  +              + GLTRHGGWAEAVA AAEAAA+GG  RG       D      PP EVR+AWRECEQL SAISKNNE KRKISRRLRNN RQAE+ K++LDGK+TGEDRNQLM+LQYRIGKLELDNMELEQSRIVHESAMRGKDLTI+KLQLQV
Sbjct:   28 DAEQNRPSSSGGRLEQHLGAVECVDMPPPAVA--LVPSVPVAS--RTLDFPTGPRATAVAVTPARINADARGERDVRGGGRAGGRDNGAAPTEHTRAFKGSSSGGASFGSPGSRAVVDEQHHLSTKRTSDARQXXXXXXXXXXXXXXXXRRSVAEVG-QTVGAE----GNSGSLAKGGGMVRGNADGVKERPR-RVSSQLSFGYSVAEGXXXXXXXXXXXXXXXQRGGEVGEN-------TRRA------------RLGTQDNKFRMQAGQSNTLVAVRLRPLLKHDREHVEVAKVLDHRVVVLMDPAKVNQEVDPLRVNRTREKRFVVGALLPLFQAHLLRYAFDYVFDATATQRAVYENTTKFLIQGVVDGYNATVFAYGCTGAGKTYTMIGNGQEGHQGIMVLTLQDLFKQQRR-----GRRYSVTVSFLEVYNENIRDLLNDTGEFLDLREDPIKGPTVSGLAEVEARTPEEIMDLLHQGNQSRTQQATRANAASSRSHAVLQGTLLHRALTVTAHHPTPVTPTCMPGHDESLHGGKTTLPRTRATNTNRAAATQNRGVRLVEGANINRSLLALGNCINALGERGNKGQFVPYR-------------------------GASSSFEETLNTLKYANRAKNIKTNATRNSLDVNHHISEYVNLIGSLRTEITRLKDQLVRGGRSGGGVGTGAGGDGVGSSRSEAMVFSPSLKASTNSLFAPADDEQQELRGSRSKQIAGSSKRASLLLSPSSSPSAKLANDDGRASGAGAAAGSMMAVVDGAAGSGTSSRNGNDLAMVAGVRDAPVASPPVSMAAGEGAVVSSPQDKDFVEEVGNFSQKEPWRDCLLSAVRATRPTHSPVHKYGEDGRLDTLSNHTHASLLITHQRPLDREQVREKIVENFRERMQLRRSLIELEDQNVQNSIE----------VTVFVY--------------VSGLTRHGGWAEAVAEAAEAAAAGG--RG-------DGNIISPPPPEVRVAWRECEQLCSAISKNNETKRKISRRLRNNGRQAERFKADLDGKITGEDRNQLMRLQYRIGKLELDNMELEQSRIVHESAMRGKDLTIEKLQLQV 1036          
BLAST of mRNA_H-paniculata_contig859.16548.1 vs. uniprot
Match: A0A024TUT4_9STRA (Kinesin-like protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TUT4_9STRA)

HSP 1 Score: 522 bits (1345), Expect = 5.540e-170
Identity = 356/746 (47.72%), Postives = 443/746 (59.38%), Query Frame = 1
Query:  604 TADHKFRMQAGQSNTLVAVRLRPLLKHDREQVEVAKVLDNKVIVLMDPAKVNQEIDPLRVNRTREKRYAFDYVFDVSATQKAVYENTTKFLIQGVLDGFNATVFAYGCTGAGKTYTMIGNDQEGHQGIMYLTLQDLFKQ-QRKASEVQGR-HYAVTVSFLEVYNENIRDLLN---DTGEFLDLREDPIKGPTVSGLAEVEARTPEEIMDLLHQGNQSRTQQATRANAVSSRSHAVLQARRGVVVESREKAPGTVATMHVGKLSLVDLAGSERAAATQNRGVRLVEGANINRSLLALGNCINALGEKGNRGQFVPYRDSKLTRLLKDSLGGNCRTVMIANISGASSSFEETLNTLKYANRAKNIKTNATRNSLDVNHHISEYVNLIGSLRTEIARLKHQLRQ---PEPRRVRTCSHGAAHTRTCSCIVLPSMELTALLGRSDSHFRQLSCLHCAKVSSSSTKAKANSMFANDKEQRKLTPCNSNAVVVPGLDGAMSTAEGEEGNVGIGAGRVVEISNSSSSMCTYDIAEEGSLQDRDFVEEVREKIVENFRERMQLRRSLIELEDQNVQNSIEASDQYVGKRQLSLVEWHNGRRLPQEVANDALQGLTRHGGWAEAVAAAAEAAASGGFWRGEATDEQDDKRASHSPPSEVRMAWRECEQLSSAISKNNEIKRKISRRLRNNSRQAEKLKSNLDGKMTGEDRNQLMKLQYRIGKLELDNMELEQSRIVHESAMRGKDLTIQKLQLQV 2817
            T   K  M AGQ+N LVAVRLRP LKHDR++ E+ KVL NKV+V+MDP      +  +R +R+REKRYAFDYVF     Q+ VY NTTKFLI G+L GFNATVFAYGCTGAGKTYTM+G   E   GIM LTL DLF+  Q   S V    +Y VTVSFLEVYNENIRDLL    D   +LDLREDP+KGP V+ L+E+ A   EE+M LL +GN++R+Q+AT ANAVSSRSHAVLQ    V VE  E  PG V+ +  GKLS++DLAGSERAA TQNRG+RL+EGANINRSLLALGNCINALGEK NRG FVPYRDSKLTRLLKDSLGGNCRTVMIANIS +  SFEET+NTLKYANRAKNIKT  TRN L+VNHHISEYV+LI +LR EI  LK Q+ Q   P P                      S +L A  G                       AK +                          G  +++ GE+G               ++SM                  E R +I++ F ERM LRR L+ELE++NV  SIE     +G+ QL + E H  +             L       E                    +E DD+       +++ +A  E  +L   I   +  K +++R+LR+  R AE+ ++ L+  +T +++ +L+ ++YRIGKLEL+NMELEQSR V ++  RGKDLTI+KL+LQ+
Sbjct:  129 TEAFKRAMWAGQANILVAVRLRPQLKHDRDRGEIVKVLGNKVVVVMDPGNQKDVVGKMR-HRSREKRYAFDYVFSPLDGQETVYNNTTKFLIHGILQGFNATVFAYGCTGAGKTYTMLGTPDE--PGIMALTLDDLFQHIQAGQSRVPNSVNYRVTVSFLEVYNENIRDLLRSDPDQDTYLDLREDPVKGPLVADLSEIVASNAEEVMRLLRRGNKNRSQEATAANAVSSRSHAVLQ----VSVEQTEATPGMVSVLKTGKLSMIDLAGSERAAVTQNRGLRLIEGANINRSLLALGNCINALGEKANRGAFVPYRDSKLTRLLKDSLGGNCRTVMIANISMSVLSFEETVNTLKYANRAKNIKTTVTRNVLNVNHHISEYVSLIANLRQEITNLKTQMTQQGIPSP---------------------TSHDLKAPKG-----------------------AKKDG-------------------------GDEASSSGEKGG--------------TASM-----------------REARVQIMKYFHERMMLRRQLLELENKNVAKSIE-----IGQHQLVVAE-HERQXXXXXXXXXXATALAHDDTRVE-------------------FEEFDDE-------ADIVVAKMEIGRLQDDIKDLSTEKSELTRKLRHTERAAEEFRAALEHTITNDEKRELLLMEYRIGKLELENMELEQSRTVQDTISRGKDLTIEKLKLQL 735          
BLAST of mRNA_H-paniculata_contig859.16548.1 vs. uniprot
Match: A0A1V9ZPN4_9STRA (Kinesin-like protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZPN4_9STRA)

HSP 1 Score: 521 bits (1343), Expect = 1.800e-169
Identity = 349/746 (46.78%), Postives = 434/746 (58.18%), Query Frame = 1
Query:  604 TADHKFRMQAGQSNTLVAVRLRPLLKHDREQVEVAKVLDNKVIVLMDPAKVNQEIDPLRVNRTREKRYAFDYVFDVSATQKAVYENTTKFLIQGVLDGFNATVFAYGCTGAGKTYTMIGNDQEGHQGIMYLTLQDLFKQ-----QRKASEVQGRHYAVTVSFLEVYNENIRDLLNDTGE---FLDLREDPIKGPTVSGLAEVEARTPEEIMDLLHQGNQSRTQQATRANAVSSRSHAVLQARRGVVVESREKAPGTVATMHVGKLSLVDLAGSERAAATQNRGVRLVEGANINRSLLALGNCINALGEKGNRGQFVPYRDSKLTRLLKDSLGGNCRTVMIANISGASSSFEETLNTLKYANRAKNIKTNATRNSLDVNHHISEYVNLIGSLRTEIARLKHQLRQPEPRRVRTCSHGAAHTRTCSCIVLPSMELTALLGRSDSHFRQLSCLHCAKVSSSSTKAKANSMFANDKEQRKLTPCNSNAVVVPGLDGAMSTAEGEEGNVGIGAGRVVEISNSSSSMCTYDIAEEGSLQDRDFVEEVREKIVENFRERMQLRRSLIELEDQNVQNSIEASDQYVGKRQLSLVEWHNGRRLPQEVANDALQGLTRHGGWAEAVAAAAEAAASGGFWRGEATDEQDDKRASHSPPSEVRMAWRECEQLSSAISKNNEIKRKISRRLRNNSRQAEKLKSNLDGKMTGEDRNQLMKLQYRIGKLELDNMELEQSRIVHESAMRGKDLTIQKLQLQV 2817
            T + K  M AGQ+N LVAVRLRP LKHDR++ E+ KVL NKV+V++DP      +  +R NR+REKRYAFDYVF  S  Q+ VY +TTKFL+ G+L GFNATVFAYGCTGAGKTYTM+G   E   GIM LTL+DLF+       R  + VQ   Y VTVSFLEVYNENIRDLL    E   +LDLREDP++GP V+ L+EV A   EE+M LL +GN++R+Q+AT ANAVSSRSHAVLQ    V VE  E  P TV+ +  GKLS++DLAGSERAA TQNRG+RL+EGANINRSLLALGNCINALGEK NRG FVPYRDSKLTRLLKDSLGGNCRTVMIANIS +  SFEET+NTLKYANRAKNIKT  TRN L+V HHISEYV+LI +LR EI  LK QL Q                       +PS                                 A+ +    KE ++L    + A +                                                     E R +I++ F ERMQLRR L++LE++NV  SIE     +G+ QL + E H  +R  +E                                     DE D          E+  A    E L   I   +E K  ++R+LR+  + AE+ ++ L+  +T +++ +L+ ++YRIGKLEL+NMELEQ+R V E+  RGKDLTI+KL+LQ+
Sbjct:   26 TEEFKRAMWAGQANILVAVRLRPQLKHDRDRGEIVKVLGNKVVVVLDPGNQKDVVGKMR-NRSREKRYAFDYVFSPSDDQRTVYTHTTKFLVHGILQGFNATVFAYGCTGAGKTYTMLGTPDE--PGIMGLTLEDLFEHIAAAHARVPALVQ---YRVTVSFLEVYNENIRDLLRSDPEEDTYLDLREDPVRGPVVADLSEVVASNAEEVMRLLRRGNKNRSQEATAANAVSSRSHAVLQ----VSVEQTEVTPDTVSVLKTGKLSMIDLAGSERAAVTQNRGLRLLEGANINRSLLALGNCINALGEKANRGAFVPYRDSKLTRLLKDSLGGNCRTVMIANISMSVLSFEETVNTLKYANRAKNIKTTVTRNVLNVTHHISEYVSLIANLRQEITNLKTQLMQQG---------------------IPSPS-------------------------------AHDLKPRRKENQELVDTKTTATM----------------------------------------------------REARVQIMKYFHERMQLRRQLLDLENKNVAKSIE-----IGQHQLVVAE-HERQREEKEA------------------------------------DESD----------EIGHARSAIESLQDDIKDLSEEKTDLTRKLRHTEKAAEEFRAALEHNITSDEKRELLLMEYRIGKLELENMELEQTRTVQETLSRGKDLTIEKLKLQL 605          
BLAST of mRNA_H-paniculata_contig859.16548.1 vs. uniprot
Match: A0A485KW97_9STRA (Kinesin-like protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KW97_9STRA)

HSP 1 Score: 523 bits (1346), Expect = 1.030e-168
Identity = 353/752 (46.94%), Postives = 438/752 (58.24%), Query Frame = 1
Query:  604 TADHKFRMQAGQSNTLVAVRLRPLLKHDREQVEVAKVLDNKVIVLMDPAKVNQEIDPLRVNRTREKRYAFDYVFDVSATQKAVYENTTKFLIQGVLDGFNATVFAYGCTGAGKTYTMIGNDQEGHQGIMYLTLQDLFKQQRKASEVQGR-----HYAVTVSFLEVYNENIRDLLN---DTGEFLDLREDPIKGPTVSGLAEVEARTPEEIMDLLHQGNQSRTQQATRANAVSSRSHAVLQARRGVVVESREKAPGTVATMHVGKLSLVDLAGSERAAATQNRGVRLVEGANINRSLLALGNCINALGEKGNRGQFVPYRDSKLTRLLKDSLGGNCRTVMIANISGASSSFEETLNTLKYANRAKNIKTNATRNSLDVNHHISEYVNLIGSLRTEIARLKHQLRQ---PEPRRVRTCSHGAAHTRTCSCIVLPSMELTALLGRSDSHFRQLSCLHCAKVSSSSTKAKANSMFANDKEQRKLTPCNSNAVVVPGLDGAMSTAEGEEGNVGIGAGRVVEISNSSSSMCTYDIAEEGSLQDRDFVEEVREKIVENFRERMQLRRSLIELEDQNVQNSIEASDQYVGKRQLSLVEWHNGRRLPQEVANDALQGLTRHGGWAEAVAAAAEAAASGGFWRGEATDEQDDKRASHSP---PSEVRMAWRECEQLSSAISKNNEIKRKISRRLRNNSRQAEKLKSNLDGKMTGEDRNQLMKLQYRIGKLELDNMELEQSRIVHESAMRGKDLTIQKLQLQV 2817
            T   K  M AGQ+N LVAVRLRP LKHDR++ E+ KVL NKV+V+MDP      +  LR +R+REKRYAFDYVF  S  Q+ VY NTTKFLI G+L GFNATVFAYGCTGAGKTYTM+G   E   GIM LTL+DLF+  + A   Q R      Y VTVSFLEVYNENIRDLL    D   +LDLREDP+KGP V+ L+EV A   +E+M LL +GN++R+Q+AT ANAVSSRSHAVLQ    V VE  E  P TV  +  GKLS++DLAGSERAA TQNRG+RL+EGANINRSLLALGNCINALGEK NRG FVPYRDSKLTRLLKDSLGGNCRTVMIAN+S + +SFEET+NTLKYANRAKNIKT  TRN L+VNHHISEYV+LI +LR EI  LK QL+Q   P P          AH                                                     E RK              D   +T  G+ G                                   + E R +I++ F +R  +RR L++LE++NV  SIE     +G+ QL + E H  RR  ++    AL                                  DD R         +++ +A  E  +L   I   +  K +++R+LR   R AE+ ++ L+  +T +++ +L+ ++YRIGKLEL+NMELEQ+R VHE+  RGKDLT++KL+LQ+
Sbjct:   77 TEAFKRAMWAGQANILVAVRLRPQLKHDRDRGEIVKVLGNKVVVVMDPGNQKDVVGKLR-HRSREKRYAFDYVFSPSDGQQTVYTNTTKFLIHGILQGFNATVFAYGCTGAGKTYTMLGTPDE--PGIMALTLEDLFEHIQAA---QSRIPTLVTYRVTVSFLEVYNENIRDLLRTDPDQDTYLDLREDPVKGPIVADLSEVVASNADEVMRLLRRGNKNRSQEATAANAVSSRSHAVLQ----VSVEQTEATPDTVTVLKTGKLSMIDLAGSERAAVTQNRGLRLLEGANINRSLLALGNCINALGEKANRGAFVPYRDSKLTRLLKDSLGGNCRTVMIANVSMSVASFEETVNTLKYANRAKNIKTTVTRNVLNVNHHISEYVSLIANLREEITNLKAQLQQQGIPSP---------TAH-----------------------------------------------------EMRKKR------------DETTTTTGGDAGTA--------------------------------TMREARVQIMKYFHDRTHVRRLLLDLENKNVAKSIE-----IGQHQLVVAE-HERRREEKDEEKAALP--------------------------------LDDARVEFEEFDDDADIAVAKLEIARLQDEIKDLSTEKSELTRKLRQTERAAEEFRAALEHTITSDEKRELLLMEYRIGKLELENMELEQTRTVHETLSRGKDLTLEKLKLQL 674          
BLAST of mRNA_H-paniculata_contig859.16548.1 vs. uniprot
Match: W4GMA4_9STRA (Kinesin-like protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GMA4_9STRA)

HSP 1 Score: 520 bits (1340), Expect = 1.610e-167
Identity = 357/742 (48.11%), Postives = 444/742 (59.84%), Query Frame = 1
Query:  616 KFRMQAGQSNTLVAVRLRPLLKHDREQVEVAKVLDNKVIVLMDPAKVNQEIDPLRVNRTREKRYAFDYVFDVSATQKAVYENTTKFLIQGVLDGFNATVFAYGCTGAGKTYTMIGNDQEGHQGIMYLTLQDLF-----KQQRKASEVQGRHYAVTVSFLEVYNENIRDLL---NDTGEFLDLREDPIKGPTVSGLAEVEARTPEEIMDLLHQGNQSRTQQATRANAVSSRSHAVLQARRGVVVESREKAPGTVATMHVGKLSLVDLAGSERAAATQNRGVRLVEGANINRSLLALGNCINALGEKGNRGQFVPYRDSKLTRLLKDSLGGNCRTVMIANISGASSSFEETLNTLKYANRAKNIKTNATRNSLDVNHHISEYVNLIGSLRTEIARLKHQLRQPEPRRVRTCSHGAAHTRTCSCIVLPSMELTALLGRSDSHFRQLSCLHCAKVSSSSTKAKANSMFANDKEQRKLTPCNSNAVVVPGLDGAMSTAEGEEGNVGIGAGRVVEISNSSSSMCTYDIAEEGSLQDRDFVEEVREKIVENFRERMQLRRSLIELEDQNVQNSIEASDQYVGKRQLSLVEWHNGRRLPQEVANDALQGLTRHGGWAEAVAAAAEAAASGGFWRGEATDEQDDKRASHSPPSEVRMAWRECEQLSSAISKNNEIKRKISRRLRNNSRQAEKLKSNLDGKMTGEDRNQLMKLQYRIGKLELDNMELEQSRIVHESAMRGKDLTIQKLQLQV 2817
            K  M AGQ+N LVAVRLRP LKHDR++ E+ KVL NKV+V++DP      +  LR +R+REKRYAFDYVF  S  Q  VY NTTKFLI G+L GFNATVFAYGCTGAGKTYTM+G   E   GIM LTL DLF      Q +  + VQ   Y VTVSFLEVYNENIRDLL   +D   +LDLREDP+KGP V+ L+E+ A   EE+M LL +GN++R+Q+AT ANAVSSRSHAVLQ    V VE  E  P TV  +  GKLS++DLAGSERAA TQNRG+RL+EGANINRSLLALGNCINALGEK NRG FVPYRDSKLTRLLKDSLGGNCRTVMIANIS +  SFEET+NTLKYANRAKNIKT  TRN L+VNHHISEYV+LI +LR EI  LK Q+ Q                       +PS     L G+                            F  D     L   N++A    G  G  +T                                         + E R +I++ F ERM LRR L+ELE++NV  SIE     +G+ QL + E H  +R  ++                E  AAA +A            +E DD+       +++ +A  E  +L   I   +  K +++R+LR   R AE+ ++ L+  +T +++ +L+ ++YRIGKLEL+NMELEQ+R V E+  RGKDLT++KL+LQ+
Sbjct:  106 KRAMWAGQANILVAVRLRPQLKHDRDRGEIVKVLGNKVVVVLDPGNHKDVVGKLR-HRSREKRYAFDYVFSPSDGQATVYNNTTKFLIHGILQGFNATVFAYGCTGAGKTYTMLGTPDE--PGIMALTLDDLFGHIEASQCKVPNLVQ---YRVTVSFLEVYNENIRDLLRSDHDQDTYLDLREDPVKGPVVADLSEIVASNAEEVMRLLRRGNKNRSQEATAANAVSSRSHAVLQ----VSVEQTEATPDTVTVLKTGKLSMIDLAGSERAAVTQNRGLRLLEGANINRSLLALGNCINALGEKANRGAFVPYRDSKLTRLLKDSLGGNCRTVMIANISMSVLSFEETVNTLKYANRAKNIKTTVTRNVLNVNHHISEYVSLIANLRQEITNLKAQMTQQG---------------------IPSPSSHDLKGKG---------------------------FKKD-----LDESNNSA----GEGGGTAT-----------------------------------------MREARVQIMKYFHERMLLRRQLLELENKNVAKSIE-----IGQHQLVVAE-HERQREEKD----------------EDKAAAVDARVE--------FEEFDDE-------ADMVVAKMEIGRLQDDIKDLSTEKGELTRKLRLTERVAEEFRAALEHTITNDEKRELLLMEYRIGKLELENMELEQTRTVQETISRGKDLTVEKLKLQL 702          
BLAST of mRNA_H-paniculata_contig859.16548.1 vs. uniprot
Match: F0Y736_AURAN (Kinesin-like protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y736_AURAN)

HSP 1 Score: 493 bits (1268), Expect = 1.040e-160
Identity = 337/716 (47.07%), Postives = 410/716 (57.26%), Query Frame = 1
Query:  625 MQAGQSNTLVAVRLRPLLKHDREQVEVAKVLDNKVIVLMDPAKVNQEIDPLRVNRTREKRYAFDYVFDVSATQKAVYENTTKFLIQGVLDGFNATVFAYGCTGAGKTYTMIGNDQE------GHQGIMYLTLQDLFKQQRKASEVQGRHYAVTVSFLEVYNENIRDLLN-------------DTGEFLDLREDPIKGPTVSGLAEVEARTPEEIMDLLHQGNQSRTQQATRANAVSSRSHAVLQARRGVVVESREKAPGTVATMHVGKLSLVDLAGSERAAATQNRGVRLVEGANINRSLLALGNCINALGEKGNRGQFVPYRDSKLTRLLKDSLGGNCRTVMIANISGASSSFEETLNTLKYANRAKNIKTNATRNSLDVNHHISEYVNLIGSLRTEIARLKHQLRQPEPRRVRTCSHGAAHTRTCSCIVLPSMELTALLGRSDSHFRQLSCLHCAKVSSSSTKAKANSMFANDKEQRKLTPCNSNAVVVPGLDGAMSTAEGEEGNVGIGAGRVVEISNSSSSMCTYDIAEEGSLQDRDFVEEVREKIVENFRERMQLRRSLIELEDQNVQNSIEASDQYVGKRQLSLVEWHNGRRLPQEVANDALQGLTRHGGWAEAVAAAAEAAASGGFWRGEATDEQDDKRASHSPPSEVRMAWRECEQLSSAISKNNEIKRKISRRLRNNSRQAEKLKSNL--DGKMTGEDRNQLMKLQYR 2709
            M  GQSN LV VR+RPLLKHD     + KVL+ KV V++DP + +   + LR +R+REK+YAFDYVFD    Q AVY  TTKFLIQGVLDGFNATVFAYG TGAGKT+TMIG+ +E      GH+   + +          ++  +     VTVSFLEVYNENIRDLL              +  EFLDLREDP+KGP V+G+ E+EA +  E+M LL +GN  R+Q AT AN VSSRSHAVLQ    + VE+RE+A GT A + +GKLSLVDLAGSERAA T+NRG RL EGANINRSLL LGNCINALG+K NRGQFVPYRDSKLTRLLKDSLGGNCRTVMIANIS +++SFEETLNTLKYANRAKNIKT+  RN L+VNHHISEYV+LI +LR E+  LK QL         T   G A        VL  + L ALL                + S+ +  AK                        PG D A                                            ++E++  + ENFRERMQLRR+LIELEDQNVQNSIE     +GKRQ+ + +W N  R+    A  +        G   AV  A                           P  V  A+ ECEQL  AI KN   K +  +RLR N + AE+  + L  D ++T ++R +L++L YR
Sbjct:    1 MWQGQSNILVVVRVRPLLKHDLGDRHIVKVLERKVCVILDPQREDDRKNVLRQHRSREKKYAFDYVFDEEDRQLAVYNRTTKFLIQGVLDGFNATVFAYGQTGAGKTFTMIGSHEEPGIAPRGHRTSKFSS----------SATSKSIRIKVTVSFLEVYNENIRDLLGSCEDPADVGGAAKEASEFLDLREDPLKGPVVAGITEIEANSATEVMALLQRGNAKRSQHATAANEVSSRSHAVLQ----ITVETREQAEGTRAAIQIGKLSLVDLAGSERAANTKNRGDRLKEGANINRSLLTLGNCINALGDKSNRGQFVPYRDSKLTRLLKDSLGGNCRTVMIANISASNASFEETLNTLKYANRAKNIKTDVKRNVLEVNHHISEYVSLIQNLRNEVTVLKQQLANS------TTGPGGA--------VLEDLPLDALLD-------------APRASAPARVAKT-----------------------PGADKAA-------------------------------------------LKEMKAWMQENFRERMQLRRTLIELEDQNVQNSIE-----IGKRQIIVADW-NASRVQTPKAGPS--------GDRVAVLLA-------------------------DAPEHVTAAYGECEQLRKAIEKNGRTKGETKKRLRENEKGAERFHAELRNDRRVTSDERRELLELMYR 570          
BLAST of mRNA_H-paniculata_contig859.16548.1 vs. uniprot
Match: A0A1W0A764_9STRA (DEAD/DEAH box RNA helicase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A764_9STRA)

HSP 1 Score: 518 bits (1333), Expect = 1.570e-160
Identity = 349/743 (46.97%), Postives = 436/743 (58.68%), Query Frame = 1
Query:  604 TADHKFRMQAGQSNTLVAVRLRPLLKHDREQVEVAKVLDNKVIVLMDPAKVNQEIDPLRVNRTREKRYAFDYVFDVSATQKAVYENTTKFLIQGVLDGFNATVFAYGCTGAGKTYTMIGNDQEGHQGIMYLTLQDLFKQQRKA-SEVQGR-HYAVTVSFLEVYNENIRDLLNDTGE---FLDLREDPIKGPTVSGLAEVEARTPEEIMDLLHQGNQSRTQQATRANAVSSRSHAVLQARRGVVVESREKAPGTVATMHVGKLSLVDLAGSERAAATQNRGVRLVEGANINRSLLALGNCINALGEKGNRGQFVPYRDSKLTRLLKDSLGGNCRTVMIANISGASSSFEETLNTLKYANRAKNIKTNATRNSLDVNHHISEYVNLIGSLRTEIARLKHQLRQPEPRRVRTCSHGAAHTRTCSCIVLPSMELTALLGRSDSHFRQLSCLHCAKVSSSSTKAKANSMFANDKEQRKLTPCNSNAVVVPGLDGAMSTAEGEEGNVGIGAGRVVEISNSSSSMCTYDIAEEGSLQDRDFVEEVREKIVENFRERMQLRRSLIELEDQNVQNSIEASDQYVGKRQLSLVEWHNGRRLPQEVANDALQGLTRHGGWAEAVAAAAEAAASGGFWRGEATDEQDDKRASHSPPSEVRMAWRECEQLSSAISKNNEIKRKISRRLRNNSRQAEKLKSNLDGKMTGEDRNQLMKLQYRIGKLELDNMELEQSRIVHESAMRGKDLTIQKLQLQV 2817
            T + K  M AGQ+N LVAVRLRP LKHDR++ E+ KVL NKV+V++DP      +  +R NR+REK+YAFDYVF  S  Q+ VY NTTKFLI G+L G+NATVFAYGCTGAGKTYTM+G   E   GIM LTL+DLF+    A + V     Y VTVSFLEVYNENIRDLL    E   +LDLREDP+KGP V+ L+E+EA   EE+M LL +GN++R+Q+AT ANAVSSRSHAVLQ    V VE  E  P TV+ +  GKLS++DLAGSERAA TQNRG+RL+EGANINRSLLALGNCINALGEK NRG FVPYRDSKLTRLLKDSLGGNCRTVMIANIS A  SFEET+NTLKYANRAKNIKT  TRN L+VNHHISEYV+LI +LR EI  LK QL Q                       +PS                                      A+D + RK             +DG  ++                                         + + R +I++ F ERMQLRR L+ELE++NV  SIE     +G+ QL + E  + R+          Q L                             ++DD          +  A     +L   I + +E K  ++R+LR   + A++ ++ L+  +T +++ +L+ ++YRIGKLEL+NMELEQSR V E+  RGKDLTI+KL+LQ+
Sbjct:  695 TDEFKRAMWAGQANILVAVRLRPQLKHDRDRGEIVKVLGNKVVVVLDPGNQKDVVGKMR-NRSREKKYAFDYVFSPSDDQRTVYNNTTKFLIHGILQGYNATVFAYGCTGAGKTYTMLGTQDE--PGIMGLTLEDLFEHIAVAHARVPALVTYRVTVSFLEVYNENIRDLLRSDPEEDTYLDLREDPVKGPIVADLSEIEASNAEEVMRLLRRGNKNRSQEATAANAVSSRSHAVLQ----VSVEQTEVTPDTVSVLKTGKLSMIDLAGSERAAVTQNRGLRLLEGANINRSLLALGNCINALGEKANRGAFVPYRDSKLTRLLKDSLGGNCRTVMIANISMAVLSFEETVNTLKYANRAKNIKTTVTRNVLNVNHHISEYVSLIANLRQEITNLKTQLMQQG---------------------IPSPS------------------------------------AHDLKIRKNQE----------VDGKTTST----------------------------------------MRDARVQIMKYFHERMQLRRQLLELENKNVAKSIE-----IGQHQLVVAE--HERQXXXXXXXXXRQHL-----------------------------DEDDXH--------ISSAKDAINRLQDDIKELSEEKPDLTRKLRQTEKAADEFRAALELNITSDEKRELLLMEYRIGKLELENMELEQSRTVQETLSRGKDLTIEKLKLQL 1279          
BLAST of mRNA_H-paniculata_contig859.16548.1 vs. uniprot
Match: A0A482S7X7_9ARCH (Kinesin motor domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S7X7_9ARCH)

HSP 1 Score: 480 bits (1235), Expect = 1.210e-158
Identity = 259/371 (69.81%), Postives = 299/371 (80.59%), Query Frame = 1
Query:  604 TADHKFRMQAGQSNTLVAVRLRPLLKHDREQVEVAKVLDNKVIVLMDPAKVNQEIDPLRVNRTREKRYAFDYVFDVSATQKAVYENTTKFLIQGVLDGFNATVFAYGCTGAGKTYTMIGNDQEGHQGIMYLTLQDLFKQQRKASEVQGRHYAVTVSFLEVYNENIRDLLNDTGEFLDLREDPIKGPTVSGLAEVEARTPEEIMDLLHQGNQSRTQQATRANAVSSRSHAVLQARRGVVVESREKAPGTVATMHVGKLSLVDLAGSERAAATQNRGVRLVEGANINRSLLALGNCINALGEKGNRGQFVPYRDSKLTRLLKDSLGGNCRTVMIANISGASSSFEETLNTLKYANRAKNIKTNATRNSLDVNH 1716
            T +H   M AGQSN LVAVR+RPL+KHD  +    +VLD KV+V++DPA  +++ D LR NR REK+YAFDYVFD ++ Q+ VY NTTKFLI GVLDG+NATVFAYG TG+GKT+TMIG+  +   GIM   ++DLF   +   + QG  Y VTVSFLEVYNENIRDLL+D  E+LDLREDPIKGP V+ + E+EA + +E+M LLHQGN  R+Q AT AN VSSRSHAVLQ    VVVE R++APGTVA + VGKLSLVDLAGSERAA T+N G RLVEGANINRSLLALGNCINALGEKGN+G FVPYRDSKLTRLLKDSLGGNCRTVMIANIS A SSFEETLNTLKYANRAKNIKTN  RN L+VN+
Sbjct:   27 TNEHMKAMWAGQSNVLVAVRVRPLMKHDIVKKSCVRVLDAKVVVILDPASGDKQ-DILRANRNREKQYAFDYVFDPNSRQEMVYNNTTKFLIHGVLDGYNATVFAYGQTGSGKTHTMIGSQSD--PGIMVRVMEDLFVHSQSQGKQQGVQYKVTVSFLEVYNENIRDLLSDVEEYLDLREDPIKGPVVASITEIEATSGQEVMQLLHQGNAKRSQAATAANEVSSRSHAVLQ----VVVECRDRAPGTVANIKVGKLSLVDLAGSERAANTKNVGARLVEGANINRSLLALGNCINALGEKGNKGNFVPYRDSKLTRLLKDSLGGNCRTVMIANISAAESSFEETLNTLKYANRAKNIKTNVQRNVLNVNY 390          
BLAST of mRNA_H-paniculata_contig859.16548.1 vs. uniprot
Match: A0A067CGK1_SAPPC (Kinesin-like protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CGK1_SAPPC)

HSP 1 Score: 491 bits (1264), Expect = 1.400e-157
Identity = 335/743 (45.09%), Postives = 421/743 (56.66%), Query Frame = 1
Query:  604 TADHKFRMQAGQSNTLVAVRLRPLLKHDREQVEVAKVLDNKVIVLMDPAKVNQEIDPLRVNRTREKRYAFDYVFDVSATQKAVYENTTKFLIQGVLDGFNATVFAYGCTGAGKTYTMIGNDQEGHQGIMYLTLQDLFKQQRKA-SEVQGR-HYAVTVSFLEVYNENIRDLLNDTGE---FLDLREDPIKGPTVSGLAEVEARTPEEIMDLLHQGNQSRTQQATRANAVSSRSHAVLQARRGVVVESREKAPGTVATMHVGKLSLVDLAGSERAAATQNRGVRLVEGANINRSLLALGNCINALGEKGNRGQFVPYRDSKLTRLLKDSLGGNCRTVMIANISGASSSFEETLNTLKYANRAKNIKTNATRNSLDVNHHISEYVNLIGSLRTEIARLKHQLRQPEPRRVRTCSHGAAHTRTCSCIVLPSMELTALLGRSDSHFRQLSCLHCAKVSSSSTKAKANSMFANDKEQRKLTPCNSNAVVVPGLDGAMSTAEGEEGNVGIGAGRVVEISNSSSSMCTYDIAEEGSLQDRDFVEEVREKIVENFRERMQLRRSLIELEDQNVQNSIEASDQYVGKRQLSLVEWHNGRRLPQEVANDALQGLTRHGGWAEAVAAAAEAAASGGFWRGEATDEQDDKRASHSPPSEVRMAWRECEQLSSAISKNNEIKRKISRRLRNNSRQAEKLKSNLDGKMTGEDRNQLMKLQYRIGKLELDNMELEQSRIVHESAMRGKDLTIQKLQLQV 2817
            T   K  M AGQ+N LVAVRLRP LKHDR++ E+ KVL NKV+V++DP      +  +R +R+REKRYAFDYVF  S  Q+ VY NTTKFL+ G+L G+NATVFAYGCTGAGKTYTM+G   E   GIM LTL+DLF+    A + V     Y VTVSFLEVYNENIRDLL    E   +LDLREDP++GP V+ L+EV A   +E+M LL +GN++R+Q+AT ANAVSSRSHAVLQ    V VE  E  P TV+ +  GKLS++DLAGSERAA TQNRG+RL+EGANINRSLLALGNCINALGEK NRG FVPYRDSKLTRLLKDSLGGNCRTVMIANIS +  SFEET+NTLKYANRAKNIKT  T   L+VNHHISEYV+LI +LR EI  LK QL Q                       +PS     L  +S                               KE + +             +G   T+                                        + E R +I++ F ERMQLRR L+ELE++NV  SIE     +G+ QL + E    R        ++                                              ++  A                    ++R+LR+  + A++ ++ L+  +T +++ +L+ ++YRIGKLEL+NMELEQ+R V E+  RGKDLTI+KL+LQ+
Sbjct:   20 TEAFKRAMWAGQANVLVAVRLRPQLKHDRDRGEIVKVLGNKVVVVLDPGNQKDVVGKMR-HRSREKRYAFDYVFAPSDGQRTVYNNTTKFLVHGILQGYNATVFAYGCTGAGKTYTMLGTPDE--PGIMGLTLEDLFEHIAMAHARVPALVTYRVTVSFLEVYNENIRDLLRSDPEEDTYLDLREDPVRGPIVADLSEVVASNADEVMRLLRRGNKNRSQEATAANAVSSRSHAVLQ----VSVEQTEVTPDTVSVLKTGKLSMIDLAGSERAAVTQNRGLRLLEGANINRSLLALGNCINALGEKANRGAFVPYRDSKLTRLLKDSLGGNCRTVMIANISMSVLSFEETVNTLKYANRAKNIKTTVT---LNVNHHISEYVSLIANLRQEITNLKTQLMQQG---------------------IPSPSAHDLKRKSG------------------------------KENQDV-------------EGVAMTST---------------------------------------MREARVQIMKYFHERMQLRRQLLELENKNVAKSIE-----IGQHQLVVAEHERQREXXXXXXXES---------------------------------------------GDIGRARTXXXXXXXXXXXXXXXXXXLTRKLRHTEKAADEFRAALEHSITSDEKRELLLMEYRIGKLELENMELEQTRTVQETLSRGKDLTIEKLKLQL 599          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig859.16548.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJ11_ECTSI2.040e-30574.13Kinesin motor domain-containing protein, putative ... [more]
A0A6H5L427_9PHAE9.020e-26251.14Kinesin motor domain-containing protein n=1 Tax=Ec... [more]
A0A024TUT4_9STRA5.540e-17047.72Kinesin-like protein n=2 Tax=Aphanomyces invadans ... [more]
A0A1V9ZPN4_9STRA1.800e-16946.78Kinesin-like protein n=1 Tax=Achlya hypogyna TaxID... [more]
A0A485KW97_9STRA1.030e-16846.94Kinesin-like protein n=1 Tax=Aphanomyces stellatus... [more]
W4GMA4_9STRA1.610e-16748.11Kinesin-like protein n=5 Tax=Aphanomyces astaci Ta... [more]
F0Y736_AURAN1.040e-16047.07Kinesin-like protein n=1 Tax=Aureococcus anophagef... [more]
A0A1W0A764_9STRA1.570e-16046.97DEAD/DEAH box RNA helicase n=1 Tax=Thraustotheca c... [more]
A0A482S7X7_9ARCH1.210e-15869.81Kinesin motor domain-containing protein (Fragment)... [more]
A0A067CGK1_SAPPC1.400e-15745.09Kinesin-like protein n=2 Tax=Saprolegnia TaxID=476... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig859contigH-paniculata_contig859:325..7712 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score894.4
Seed ortholog evalue4.5e-257
Seed eggNOG ortholog2880.D8LJ11
KEGG koko:K10401
Hectar predicted targeting categoryother localisation
EggNOG free text desc.microtubule motor activity
EggNOG OGsCOG5059@1,KOG0242@2759
Ec32 ortholog descriptionP-loop containing nucleoside triphosphate hydrolase
Ec32 orthologEc-20_002270.1
COG Functional cat.Z
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04812
Exons17
Model size2817
Cds size2817
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931078.3118167-CDS-H-paniculata_contig859:324..4771622931078.3118167-CDS-H-paniculata_contig859:324..477Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig859 325..477 -
1691481579.8102722-CDS-H-paniculata_contig859:324..4771691481579.8102722-CDS-H-paniculata_contig859:324..477Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig859 325..477 -
1622931078.3273654-CDS-H-paniculata_contig859:840..11121622931078.3273654-CDS-H-paniculata_contig859:840..1112Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig859 841..1112 -
1691481579.8211277-CDS-H-paniculata_contig859:840..11121691481579.8211277-CDS-H-paniculata_contig859:840..1112Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig859 841..1112 -
1622931078.3456326-CDS-H-paniculata_contig859:1360..14421622931078.3456326-CDS-H-paniculata_contig859:1360..1442Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig859 1361..1442 -
1691481579.8296003-CDS-H-paniculata_contig859:1360..14421691481579.8296003-CDS-H-paniculata_contig859:1360..1442Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig859 1361..1442 -
1622931078.3659708-CDS-H-paniculata_contig859:1723..18341622931078.3659708-CDS-H-paniculata_contig859:1723..1834Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig859 1724..1834 -
1691481579.840062-CDS-H-paniculata_contig859:1723..18341691481579.840062-CDS-H-paniculata_contig859:1723..1834Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig859 1724..1834 -
1622931078.3846312-CDS-H-paniculata_contig859:2194..24581622931078.3846312-CDS-H-paniculata_contig859:2194..2458Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig859 2195..2458 -
1691481579.858054-CDS-H-paniculata_contig859:2194..24581691481579.858054-CDS-H-paniculata_contig859:2194..2458Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig859 2195..2458 -
1622931078.4027708-CDS-H-paniculata_contig859:2599..27171622931078.4027708-CDS-H-paniculata_contig859:2599..2717Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig859 2600..2717 -
1691481579.8704464-CDS-H-paniculata_contig859:2599..27171691481579.8704464-CDS-H-paniculata_contig859:2599..2717Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig859 2600..2717 -
1622931078.4207156-CDS-H-paniculata_contig859:2952..31591622931078.4207156-CDS-H-paniculata_contig859:2952..3159Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig859 2953..3159 -
1691481579.878341-CDS-H-paniculata_contig859:2952..31591691481579.878341-CDS-H-paniculata_contig859:2952..3159Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig859 2953..3159 -
1622931078.4343874-CDS-H-paniculata_contig859:3442..35171622931078.4343874-CDS-H-paniculata_contig859:3442..3517Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig859 3443..3517 -
1691481579.8864102-CDS-H-paniculata_contig859:3442..35171691481579.8864102-CDS-H-paniculata_contig859:3442..3517Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig859 3443..3517 -
1622931078.4500449-CDS-H-paniculata_contig859:3952..40841622931078.4500449-CDS-H-paniculata_contig859:3952..4084Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig859 3953..4084 -
1691481579.8947349-CDS-H-paniculata_contig859:3952..40841691481579.8947349-CDS-H-paniculata_contig859:3952..4084Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig859 3953..4084 -
1622931078.4649138-CDS-H-paniculata_contig859:4425..45171622931078.4649138-CDS-H-paniculata_contig859:4425..4517Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig859 4426..4517 -
1691481579.902978-CDS-H-paniculata_contig859:4425..45171691481579.902978-CDS-H-paniculata_contig859:4425..4517Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig859 4426..4517 -
1622931078.4798565-CDS-H-paniculata_contig859:4764..49201622931078.4798565-CDS-H-paniculata_contig859:4764..4920Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig859 4765..4920 -
1691481579.9107-CDS-H-paniculata_contig859:4764..49201691481579.9107-CDS-H-paniculata_contig859:4764..4920Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig859 4765..4920 -
1622931078.4940245-CDS-H-paniculata_contig859:5199..52741622931078.4940245-CDS-H-paniculata_contig859:5199..5274Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig859 5200..5274 -
1691481579.9213226-CDS-H-paniculata_contig859:5199..52741691481579.9213226-CDS-H-paniculata_contig859:5199..5274Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig859 5200..5274 -
1622931078.509207-CDS-H-paniculata_contig859:5517..55681622931078.509207-CDS-H-paniculata_contig859:5517..5568Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig859 5518..5568 -
1691481579.9295945-CDS-H-paniculata_contig859:5517..55681691481579.9295945-CDS-H-paniculata_contig859:5517..5568Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig859 5518..5568 -
1622931078.526893-CDS-H-paniculata_contig859:5980..61271622931078.526893-CDS-H-paniculata_contig859:5980..6127Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig859 5981..6127 -
1691481579.937709-CDS-H-paniculata_contig859:5980..61271691481579.937709-CDS-H-paniculata_contig859:5980..6127Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig859 5981..6127 -
1622931078.5492873-CDS-H-paniculata_contig859:6316..63951622931078.5492873-CDS-H-paniculata_contig859:6316..6395Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig859 6317..6395 -
1691481579.9502141-CDS-H-paniculata_contig859:6316..63951691481579.9502141-CDS-H-paniculata_contig859:6316..6395Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig859 6317..6395 -
1622931078.564465-CDS-H-paniculata_contig859:6625..67171622931078.564465-CDS-H-paniculata_contig859:6625..6717Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig859 6626..6717 -
1691481579.958469-CDS-H-paniculata_contig859:6625..67171691481579.958469-CDS-H-paniculata_contig859:6625..6717Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig859 6626..6717 -
1622931078.576995-CDS-H-paniculata_contig859:7001..77121622931078.576995-CDS-H-paniculata_contig859:7001..7712Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig859 7002..7712 -
1691481579.9714031-CDS-H-paniculata_contig859:7001..77121691481579.9714031-CDS-H-paniculata_contig859:7001..7712Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig859 7002..7712 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig859.16548.1prot_H-paniculata_contig859.16548.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig859 325..7712 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig859.16548.1

>prot_H-paniculata_contig859.16548.1 ID=prot_H-paniculata_contig859.16548.1|Name=mRNA_H-paniculata_contig859.16548.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=939bp
DGDHGRPSSSGGRLEQHLGAVESVEITSPTATGGIIPSTQSFGGISVLGF
PSAKASGRSGVRGAAETPSRSSNNNGGSTLTSRIAAGFANKKTSDVVVQG
GSVGGYGRRPRQRIGGKRWSAEQVLLGAGSSAAMGGRGKIDGRKTRPRQR
AGSQPGFSSTVDDGDGAGGGDTGDRGNGDLGGERRAPGAGRGGRAEGCHT
GTADHKFRMQAGQSNTLVAVRLRPLLKHDREQVEVAKVLDNKVIVLMDPA
KVNQEIDPLRVNRTREKRYAFDYVFDVSATQKAVYENTTKFLIQGVLDGF
NATVFAYGCTGAGKTYTMIGNDQEGHQGIMYLTLQDLFKQQRKASEVQGR
HYAVTVSFLEVYNENIRDLLNDTGEFLDLREDPIKGPTVSGLAEVEARTP
EEIMDLLHQGNQSRTQQATRANAVSSRSHAVLQARRGVVVESREKAPGTV
ATMHVGKLSLVDLAGSERAAATQNRGVRLVEGANINRSLLALGNCINALG
EKGNRGQFVPYRDSKLTRLLKDSLGGNCRTVMIANISGASSSFEETLNTL
KYANRAKNIKTNATRNSLDVNHHISEYVNLIGSLRTEIARLKHQLRQPEP
RRVRTCSHGAAHTRTCSCIVLPSMELTALLGRSDSHFRQLSCLHCAKVSS
SSTKAKANSMFANDKEQRKLTPCNSNAVVVPGLDGAMSTAEGEEGNVGIG
AGRVVEISNSSSSMCTYDIAEEGSLQDRDFVEEVREKIVENFRERMQLRR
SLIELEDQNVQNSIEASDQYVGKRQLSLVEWHNGRRLPQEVANDALQGLT
RHGGWAEAVAAAAEAAASGGFWRGEATDEQDDKRASHSPPSEVRMAWREC
EQLSSAISKNNEIKRKISRRLRNNSRQAEKLKSNLDGKMTGEDRNQLMKL
QYRIGKLELDNMELEQSRIVHESAMRGKDLTIQKLQLQV
back to top

mRNA from alignment at H-paniculata_contig859:325..7712-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig859.16548.1 ID=mRNA_H-paniculata_contig859.16548.1|Name=mRNA_H-paniculata_contig859.16548.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7388bp|location=Sequence derived from alignment at H-paniculata_contig859:325..7712- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GACGGTGATCATGGCCGTCCGTCTTCCAGTGGTGGCCGTCTGGAACAACA TCTCGGCGCCGTCGAATCTGTTGAAATTACTTCTCCCACCGCGACCGGTG GAATAATACCCTCGACGCAGTCGTTTGGGGGCATTTCCGTTCTAGGTTTC CCGTCAGCCAAAGCCAGCGGCAGAAGTGGGGTAAGAGGAGCCGCGGAAAC GCCTAGCCGAAGTAGCAACAACAACGGTGGTTCGACTCTCACAAGCAGAA TCGCAGCTGGGTTCGCAAACAAGAAGACGTCCGACGTGGTAGTACAAGGG GGAAGTGTGGGCGGCTACGGGCGACGGCCACGACAAAGAATAGGTGGGAA ACGGTGGTCTGCGGAACAAGTTTTACTCGGAGCCGGATCTTCTGCTGCAA TGGGGGGGCGCGGAAAAATAGATGGTAGAAAAACCCGGCCTCGCCAAAGA GCAGGATCTCAACCAGGGTTCAGCTCAACAGTCGATGATGGTGATGGAGC TGGAGGTGGTGATACGGGTGATCGAGGGAATGGTGACCTCGGGGGGGAGA GGCGGGCACCAGGAGCGGGCAGGGGAGGCAGGGCGGAAGGATGCCACACT GGCACAGCGGACCACAAGTTTCGAATGCAGGCTGGGCAGAGCAATACCCT CGTGGCGGTTCGGTTAAGACCGCTGCTGAAGCACGACAGGGAGCAAGTGG AGGTGGCGAAGGTGATATTGAGTTTTCTTCCCTTACTTCTGAAGCTAACG CACCCATGCTCAAACTACTGTTGTAAGCTGGACGCGAATCACGGGTCGAC ACCGGTGGAAACGCTTGAGAGGCTGCTCGATGGCATGCTAATCGAGAGGA AATGCGTATGAAACGTAGTACAGCCACATGCGCGCATTCGTGTGCATCCA TACCACCGTCTTATCCACCCCCAACTGAAGCACGTCTCTCACTGAGCTCT ATTTTACGTCCCGCAATGAACTCTTTTGATGTCGCATGTCGTCAGGTTTT AGATAACAAAGTTATTGTTCTCATGGATCCCGCCAAGGTCAACCAGGAGA TTGACCCTCTTCGTGTTAATCGCACCAGAGAGAAGAGGTCGGTCAGGAAC GGTAACGAGGTCTGACGCTATTCGCACCGCGTCACGTGCGAGTTGCAGTA GGATACTCGAGTATGTTATCTAACCTGAACGCCTCACGTAGGCGGGGTTC GCTCGTTGTAGTTCTTCGCCGTGTAGTTTCCGTAAGCATCAAGTATAGTT GTATTGTCGTATGCTCGTTTCATTTGCGGCTTTACGTACCCTGCATCCTC ACTGTGCTTTGACTCAGATATGCTTTTGACTACGTCTTCGACGTGTCAGC TACGCAGAAGGCAGTCTACGAGAATACCACAAAGTTTCTGATACAGGTGA GACAACGCGGGTAGCATAGAGCCATATGCTGCTGTAGATGTAGGTGGTTT CTACACCCAGTGCGGTCAAAATAAGCCTTATTATAGTACCAATAGTTGTA AAATGGGCTAGTCTCAATTTCTGTACGCAACTTCCGGTATCATCTGACCG ACGACATTTCCGCAATGCTGGAAATCCCACCCCAGGGAGTGCTGGACGGA TTTAATGCCACAGTTTTCGCGTACGGGTGTACTGGTGCCGGCAAAACTTA CACAATGATTGGCAACGATCAAGAGGGACACCAGGGGATTATGTACCTAA CCCTTCAGGACCTCTTCAAGCAACAACGAAAGGTATGAAGATCTTTGTCC ATTCCACATTCAGAGCTAGGAATATGTTCCCCCTGCATGGTACACATCAG ACAGCGTAGAAGTTGGTGCCTACGTGGGTTACCGGATTATTTTCCTTGCC GCGTGTCAAAGGTCTCATCGAAACAGTTCGCATTGCCTACGGTACACCCT GCAGATGCACGAAACGCGCACATCACCTACTCTGAACAATCGGCAACCAC CCCAGATACCTTTTTCGGGTACACATACATGCATACGTGATGGTGCGGGA ACCCGTGAAAATGTGTTCAATGGGCAGTAGCAAAATGTTAATGCTGTGCT CTCGATCCCCTATTTCGGTTCAGCTCTCCGTCTGCCCGTCACTACTTGGG CGTGCCACTGTTCCTGCCGGTTTGTGTTTTCAAACAAAAAACAGGCGAGC GAGGTCCAAGGCAGGCATTATGCTGTGACCGTCTCCTTCCTCGAGGTAGG GTGTATCAGAGTAGATCCATTTACTCTCCCACATGCTTTGTCGTAACAGG TTCAGAGAGGCACTGCACGAGGTACACATCCACCGGAAGTCGTTTCGTAA GCACCGCTTAACGTGCGGGAAGATTCTGCACAGGCATCACTGATCATGCA CTTCCCCTTTCATATGACCCTCATCCTCTCGTTCACCCGCTGCCTTGCCC ACTGATGGTCCTCCCGTTGCGTGCTGTCCAATTGGAAGGTATACAACGAA AACATTCGAGATCTTCTCAACGATACTGGCGAGTTTCTAGACCTGCGGGA AGATCCCATCAAGGTACAGCACGGGTTGTGTGCGATTGCAGAGACACTAG GCCCCGTGATCCGCGAGGACAAGCGTATCCCGACTTAGTCAAACTGCGCT ATCTTCTTGGCTACAGCAGAACATTACACTCACGGGAACTTATGTGATAT CGCGGAAACTCGCCGCGCCCAATCGCCATGCAATCGCTATCAGTACCAAG GAATTAAAACTCCCTGAAATAGATTAAGAAACACTGCCAGAAAATTGTAT GACACCGAACTTTCATTTCTCTCCGTCCAACACCGAATACAGGGCCCGAC GGTTTCGGGTTTAGCGGAAGTTGAGGCCCGCACCCCGGAGGAAATAATGG ATCTGTTGCACCAGGGAAACCAAAGCAGAACACAGCAGGCAACGCGTGCA AACGCAGTGTCGTCCCGCTCTCACGCTGTTCTGCAGGCAAGGCGAGGGGT TTTATATGATGTCAGCCAACTCTACATCTGCATCCCACTTCTTAATGGTC AATAAATATATATTTGTCTCTTTCTATATTCTAGTGAAAAAGCCTTAGCC ATGGCCGATTTAGCATGCGCAGCCTCCGAGAATGGAGAATAACAGTTGTA CTTCGTGCCATAGTTCGACCTCTTTCCTCTTTTTTCGGTAGTATACCCTA CCCTGTGCTCTGTCAAACGTTTGTGTTGCGTCTGTGGTGATATAGGTGGT GGTTGAAAGCCGCGAGAAGGCGCCGGGAACAGTGGCAACGATGCACGTGG GAAAGCTTTCTCTAGTCGATCTAGCCGGCAGCGAGAGGTAACTATACTAC GATGAGCCTCATGACACATGCCGTAGGGGTAAATGGACAGACCTCTACCT GCTTGCTGGTATTAACCAAATGAAGCAACCTCTTGTTGCCTAGGGTTGAT GATTGCACAAGTGTATTGTTCTTGCTCTGACGGGTAGATTGCTGAAACTT GTGGTCTCCCGAAAGTCGGACGCACATCTCGTGCACACTTGCATACACTA GTACAATGTCTAGCCGTTTTGGGAAATTGCTCTCGTTGGGACTCTTGCTC CGATGTTCGAGTTTCTCCACAATGTACATGCCACCATTTCCCCTCCGCGC GCGCTATCCATTATTGAAACGAATGCAGAGCGGCCGCCACCCAAAATAGA GGTGTGCGGCTTGTGGAGGGTGCCAATATCAACCGTTCGTTGTTGGCTCT GGGGAACTGTATCAACGCCCTAGGGGAGAAGGGAAACAGGGGTCAGTTTG TTCCTTACAGGTGTGCAATGCTCAAAAGCGATCGGCACGATCGGCACAAT TGTATTAGATTCACGCAACGTGTATTGGAATATATGAGGCGCGCGAAGGA TCACAGTAAGGGTTACCCAAGCACGTTCTGTCAAGCAGCACGTGAGCACA AAACACACCTTATATCGCCTGTGTGGCATGTCCTCGCTGAAGCTGGCTTC CCGACCCCTAATTCCTGGCATAGCTACACTCTTTGCTCATGCAGTGCTTA GTAACGAAAATGGTGATGGCTTCGCCTGCAAGAAAATTGTAGTGTACCAC CAAAATAGACCACGGAGCGCTTGCTGCGTCTACAAGTACGGTGCCGCTCC TACGCACAACGTAGCCCATAATATAGAATAACTCTCGGATATGATGCTCC TCTTCGGTTGTTCGACATCGCTGTCTTCTTTTCGCTTCTTCACAGAGATT CTAAGCTGACCCGTTTGCTGAAGGACTCTCTCGGGGGTAACTGTCGGACT GTCATGATAGCGAATATCAGGTAGCTATGTGTGCTCAGTCTCTTCACGAT GTTGATCTCTCTTCTTGCTACATGGGCATAAGCTGGAGCATTTTTTCACT TTTACATCACTGATTGAGTGCACGTTTCTGTGGTGATCCTTCCGCAGGCG GGGTTGAAGAACCTCGGTATTGAAAAAGATTTGTACAGCACAAAAGTATT ATCTCCACGTTGTGCCAGCCTCCTCCTGTACAGGTATTCCCAACCTTACG CTCATGTCTCCCGCTGTTCTGTCCCGGGTCCCCGTGTGAAAACAATGCAA CAGCGGTGCATCCTCCTCCTTCGAGGAGACGCTCAATACGCTAAAATACG CAAATCGCGCCAAGAACATCAAAACAAACGCGACGCGCAACTCTCTGGAT GTAAATCACCACATTTCCGAGTATGTCAATTTGATCGGCAGCTTGCGCAC CGAGATCGCTCGGCTCAAACATCAACTAAGGCAACCCGAGCCCCGCAGAG TACGTACCTGGTAGAGATGTGATTGGTGTCGACTGGCAAAGAGTAGGCAC CAGACACTGCAAGAAAAATTGGTGCGGACACACGCAGTAAAATACCGATA TAGTTTGGCGGTGTTTTAGCAATCACAATGACGACGATAGAGCTTGGAGA CTCTGCGTGAAACCCCTTTGAAGGAGCCAATAAGGCGGGCAAGTATTCCC TAGCAAGTGTGGATTTCCTCGCGTTTTGTTGTTGGAAATTCCGAGTTCTC ACGGTGCCGCGCACACCAGAACGTGCAGCTGTATTGTGTTGCCCTCTATG GAACTAACAGCGTTACTAGGTCGAAGCGATAGTCATTTTCGGCAACTCTC CTGCCTTCACTGCGTCATAGTCAAGGCTATCAATCGCTTCCCATATCTAG ATATATGTGCCGCATCCACCTCTCCGCCTTCCCCGCTCCCCCGTACCCCC TTCCTGTGTCCAACCGCCTGCGTTGCTCTCGGCCTGTCCTCGCCTTGCCC CTAGGCAAAGGTTTCCTCATCATCGACTAAGGCCAAAGCGAATTCGATGT TCGCCAATGACAAAGAGCAACGGAAGCTCACTCCATGTAACAGCAATGCG GTGGTGGTACCGGGTCTCGATGGCGCGATGTCGACGGCTGAGGGAGAGGA GGGAAATGTGGGCATCGGCGCCGGGCGGGTAGTAGAGATTTCAAACTCCT CCTCTTCTATGTGCACTTATGACATTGCGGAAGAAGGATCACTGCAAGAC AGAGATTTTGTGGAAGAGGTGAATGGAGTAGTGAGTTAGAGATGGACGGA GTAAAGTTGCTGGGTTTTTCGACCAAGTTGCTGGTGCTCGACGAAAATAT CAGACCCATCATGTTGTATTTCGCGTGTAGAAATCCAGAAGTTTCGATAG ATTTTGTTGAAACGTAATAAGAGTTTGACAAGGATCGGGGTAAGTTAATG CTACTAATGGCGGGCCGTACAAATGAAGCAACAGGGAACAACAATAACAT ATGGAGTACACATCCTACTTCAGTTCTAGAGTAGATCGGCGCATGGTACA TCTTTTAGACAACTATAAAGTGTTGTTACATCCAGGACAAGATAGAAGGC TGATCGATGTCTTTTGGTGCGTCAAAAGGTTCGGGAAAAAATCGTGGAGA ACTTTAGGGAGAGGATGCAGCTTCGCCGCTCGCTGATCGAGCTCGAGGAT CAGAACGTTCAGAACAGCATAGAGGCAAGTGACCAGTATGTACTAATAGT CAGCTGAGCTCGACCTCTTGGCTCAACAGCGGAGATCGAAGTTCACACGT GTACAGCAGTCGATGGACAAGCGGTGCGCTCTGTCGTTAGTCGCATTGAT CACAAATTAAACGTAGTCACACGGAATGCATAAAGACGTGGACCATCCCT GTCGTCGCCTATGCATACATTTGCGCAAGATGAGGCATCGACAATCCACC AGCACCACCTCGACCCTGCCGCCCGCGCCCACTGCCCCACATTACCATCG CAACCATGTCGGGGAGCCAGGTCGGCAAGCGACAACTGTCGCTGGTTGAG TGGCATAATGGGAGACGGCTTCCCCAGGAGGTAGCCAACGATGCGTTACA AGGTGGGGCAAATTTTCACTTTCGAATAGAAAGTATGCAAGGGGTGATTT TGTACCCTCCTTGTCCTATGGTTTGCATGTATGTTCGATTGAGCTTGGCG ACGGCGACGCCATTGAATTTGAGAACCGAAAAATCGCGTCGTTTGAAACA ATCCAGCGTTTATCGCTTGAGCTCTATAAAACTCCTGTCCGCCTTTTTCG TTCGATACACAGTTTTCCACCCGCAGTAGTCTTACCTCTGAAATATACAG GTCTAACGAGGCATGGCGGCTGGGCAGAGGCGGTTGCTGCAGCAGCGGAG GCAGCAGCCAGTGGAGGCTTCTGGCGGGGGGAGGCAACGGATGAACAGGA TGACAAACGGGCCTCTCATTCTCCGCCATCCGAGGTACGGATGGCGTGGA GGGAATGCGAGCAGCTGAGCAGCGCTATATCGAAGAACAACGAGATTAAG CGCAAGATATCGCGACGACTGCGAAATAACAGCCGTCAGGCAGAGAAGCT GAAGTCGAACCTCGACGGCAAGGTGATACGGGGACAGTATTGATTTTGTC CTCGGTTGGGGCGAATATAACTATAAAGAGCAAGTTTCGTTTCTGACTGA TGTTTGGGAGGTTTAGAGTGATTGACGTCTCAGTAATGTGACGCGAAGCA AGCATATCGCAGCACTCCAAGAAGGGACGAAAACTTTGGTCATTACTGTG AGTTCTGGTTCTCTCATGTTGCCTCTCAACAATCTTCCTGTGTATTTAGA CTTGAATATGGCGATCCGGAAAAATTTATGCAAAATCAAGTGAAACTGTC GAATCAGAACGGTTCGCCATAAGATTACGCAAGTAGTTACAACGTATTTA CAACATTTTGATGACACTCGATCTTTGGTCTCCAGATGACGGGAGAGGAC CGAAACCAGCTAATGAAGCTTCAATATCGTATAGGCAAACTTGAATTGGA CAACATGGAGCTCGAGCAAAGTCGAATCGTGCACGAGAGCGCCATGCGAG GGAAGGATCTGACAATACAGAAGCTGCAATTGCAGGTG
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig859:325..7712-

>mRNA_H-paniculata_contig859.16548.1 ID=mRNA_H-paniculata_contig859.16548.1|Name=mRNA_H-paniculata_contig859.16548.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=5634bp|location=Sequence derived from alignment at H-paniculata_contig859:325..7712- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GACGGTGATCATGGCCGTCCGTCTTCCAGTGGTGGCCGTCTGGAACAACA
TCTCGGCGCCGTCGAATCTGTTGAAATTACTTCTCCCACCGCGACCGGTG
GAATAATACCCTCGACGCAGTCGTTTGGGGGCATTTCCGTTCTAGGTTTC
CCGTCAGCCAAAGCCAGCGGCAGAAGTGGGGTAAGAGGAGCCGCGGAAAC
GCCTAGCCGAAGTAGCAACAACAACGGTGGTTCGACTCTCACAAGCAGAA
TCGCAGCTGGGTTCGCAAACAAGAAGACGTCCGACGTGGTAGTACAAGGG
GGAAGTGTGGGCGGCTACGGGCGACGGCCACGACAAAGAATAGGTGGGAA
ACGGTGGTCTGCGGAACAAGTTTTACTCGGAGCCGGATCTTCTGCTGCAA
TGGGGGGGCGCGGAAAAATAGATGGTAGAAAAACCCGGCCTCGCCAAAGA
GCAGGATCTCAACCAGGGTTCAGCTCAACAGTCGATGATGGTGATGGAGC
TGGAGGTGGTGATACGGGTGATCGAGGGAATGGTGACCTCGGGGGGGAGA
GGCGGGCACCAGGAGCGGGCAGGGGAGGCAGGGCGGAAGGATGCCACACT
GGCACAGCGGACCACAAGTTTCGAATGCAGGCTGGGCAGAGCAATACCCT
CGTGGCGGTTCGGTTAAGACCGCTGCTGAAGCACGACAGGGAGCAAGTGG
AGGTGGCGAAGGACGGTGATCATGGCCGTCCGTCTTCCAGTGGTGGCCGT
CTGGAACAACATCTCGGCGCCGTCGAATCTGTTGAAATTACTTCTCCCAC
CGCGACCGGTGGAATAATACCCTCGACGCAGTCGTTTGGGGGCATTTCCG
TTCTAGGTTTCCCGTCAGCCAAAGCCAGCGGCAGAAGTGGGGTAAGAGGA
GCCGCGGAAACGCCTAGCCGAAGTAGCAACAACAACGGTGGTTCGACTCT
CACAAGCAGAATCGCAGCTGGGTTCGCAAACAAGAAGACGTCCGACGTGG
TAGTACAAGGGGGAAGTGTGGGCGGCTACGGGCGACGGCCACGACAAAGA
ATAGGTGGGAAACGGTGGTCTGCGGAACAAGTTTTACTCGGAGCCGGATC
TTCTGCTGCAATGGGGGGGCGCGGAAAAATAGATGGTAGAAAAACCCGGC
CTCGCCAAAGAGCAGGATCTCAACCAGGGTTCAGCTCAACAGTCGATGAT
GGTGATGGAGCTGGAGGTGGTGATACGGGTGATCGAGGGAATGGTGACCT
CGGGGGGGAGAGGCGGGCACCAGGAGCGGGCAGGGGAGGCAGGGCGGAAG
GATGCCACACTGGCACAGCGGACCACAAGTTTCGAATGCAGGCTGGGCAG
AGCAATACCCTCGTGGCGGTTCGGTTAAGACCGCTGCTGAAGCACGACAG
GGAGCAAGTGGAGGTGGCGAAGGTTTTAGATAACAAAGTTATTGTTCTCA
TGGATCCCGCCAAGGTCAACCAGGAGATTGACCCTCTTCGTGTTAATCGC
ACCAGAGAGAAGAGGTTTTAGATAACAAAGTTATTGTTCTCATGGATCCC
GCCAAGGTCAACCAGGAGATTGACCCTCTTCGTGTTAATCGCACCAGAGA
GAAGAGATATGCTTTTGACTACGTCTTCGACGTGTCAGCTACGCAGAAGG
CAGTCTACGAGAATACCACAAAGTTTCTGATACAGATATGCTTTTGACTA
CGTCTTCGACGTGTCAGCTACGCAGAAGGCAGTCTACGAGAATACCACAA
AGTTTCTGATACAGGGAGTGCTGGACGGATTTAATGCCACAGTTTTCGCG
TACGGGTGTACTGGTGCCGGCAAAACTTACACAATGATTGGCAACGATCA
AGAGGGACACCAGGGGATTATGTACCTAACCCTTCAGGACCTCTTCAAGC
AACAACGAAAGGGAGTGCTGGACGGATTTAATGCCACAGTTTTCGCGTAC
GGGTGTACTGGTGCCGGCAAAACTTACACAATGATTGGCAACGATCAAGA
GGGACACCAGGGGATTATGTACCTAACCCTTCAGGACCTCTTCAAGCAAC
AACGAAAGGCGAGCGAGGTCCAAGGCAGGCATTATGCTGTGACCGTCTCC
TTCCTCGAGGCGAGCGAGGTCCAAGGCAGGCATTATGCTGTGACCGTCTC
CTTCCTCGAGGTATACAACGAAAACATTCGAGATCTTCTCAACGATACTG
GCGAGTTTCTAGACCTGCGGGAAGATCCCATCAAGGTATACAACGAAAAC
ATTCGAGATCTTCTCAACGATACTGGCGAGTTTCTAGACCTGCGGGAAGA
TCCCATCAAGGGCCCGACGGTTTCGGGTTTAGCGGAAGTTGAGGCCCGCA
CCCCGGAGGAAATAATGGATCTGTTGCACCAGGGAAACCAAAGCAGAACA
CAGCAGGCAACGCGTGCAAACGCAGTGTCGTCCCGCTCTCACGCTGTTCT
GCAGGCAAGGCGAGGGGGCCCGACGGTTTCGGGTTTAGCGGAAGTTGAGG
CCCGCACCCCGGAGGAAATAATGGATCTGTTGCACCAGGGAAACCAAAGC
AGAACACAGCAGGCAACGCGTGCAAACGCAGTGTCGTCCCGCTCTCACGC
TGTTCTGCAGGCAAGGCGAGGGGTGGTGGTTGAAAGCCGCGAGAAGGCGC
CGGGAACAGTGGCAACGATGCACGTGGGAAAGCTTTCTCTAGTCGATCTA
GCCGGCAGCGAGAGGTGGTGGTTGAAAGCCGCGAGAAGGCGCCGGGAACA
GTGGCAACGATGCACGTGGGAAAGCTTTCTCTAGTCGATCTAGCCGGCAG
CGAGAGAGCGGCCGCCACCCAAAATAGAGGTGTGCGGCTTGTGGAGGGTG
CCAATATCAACCGTTCGTTGTTGGCTCTGGGGAACTGTATCAACGCCCTA
GGGGAGAAGGGAAACAGGGGTCAGTTTGTTCCTTACAGAGCGGCCGCCAC
CCAAAATAGAGGTGTGCGGCTTGTGGAGGGTGCCAATATCAACCGTTCGT
TGTTGGCTCTGGGGAACTGTATCAACGCCCTAGGGGAGAAGGGAAACAGG
GGTCAGTTTGTTCCTTACAGAGATTCTAAGCTGACCCGTTTGCTGAAGGA
CTCTCTCGGGGGTAACTGTCGGACTGTCATGATAGCGAATATCAGAGATT
CTAAGCTGACCCGTTTGCTGAAGGACTCTCTCGGGGGTAACTGTCGGACT
GTCATGATAGCGAATATCAGCGGTGCATCCTCCTCCTTCGAGGAGACGCT
CAATACGCTAAAATACGCAAATCGCGCCAAGAACATCAAAACAAACGCGA
CGCGCAACTCTCTGGATGTAAATCACCACATTTCCGAGTATGTCAATTTG
ATCGGCAGCTTGCGCACCGAGATCGCTCGGCTCAAACATCAACTAAGGCA
ACCCGAGCCCCGCAGAGTACGTACCTGCGGTGCATCCTCCTCCTTCGAGG
AGACGCTCAATACGCTAAAATACGCAAATCGCGCCAAGAACATCAAAACA
AACGCGACGCGCAACTCTCTGGATGTAAATCACCACATTTCCGAGTATGT
CAATTTGATCGGCAGCTTGCGCACCGAGATCGCTCGGCTCAAACATCAAC
TAAGGCAACCCGAGCCCCGCAGAGTACGTACCTGTTCTCACGGTGCCGCG
CACACCAGAACGTGCAGCTGTATTGTGTTGCCCTCTATGGAACTAACAGC
GTTACTAGGTCGAAGCGATAGTCATTTTCGGCAACTCTCCTGCCTTCACT
GCTTCTCACGGTGCCGCGCACACCAGAACGTGCAGCTGTATTGTGTTGCC
CTCTATGGAACTAACAGCGTTACTAGGTCGAAGCGATAGTCATTTTCGGC
AACTCTCCTGCCTTCACTGCGCAAAGGTTTCCTCATCATCGACTAAGGCC
AAAGCGAATTCGATGTTCGCCAATGACAAAGAGCAACGGAAGCTCACTCC
ATGTAACAGCAATGCGGTGGTGGTACCGGGTCTCGATGGCGCGATGTCGA
CGGCTGAGGGAGAGGAGGGAAATGTGGGCATCGGCGCCGGGCGGGTAGTA
GAGATTTCAAACTCCTCCTCTTCTATGTGCACTTATGACATTGCGGAAGA
AGGATCACTGCAAGACAGAGATTTTGTGGAAGAGGCAAAGGTTTCCTCAT
CATCGACTAAGGCCAAAGCGAATTCGATGTTCGCCAATGACAAAGAGCAA
CGGAAGCTCACTCCATGTAACAGCAATGCGGTGGTGGTACCGGGTCTCGA
TGGCGCGATGTCGACGGCTGAGGGAGAGGAGGGAAATGTGGGCATCGGCG
CCGGGCGGGTAGTAGAGATTTCAAACTCCTCCTCTTCTATGTGCACTTAT
GACATTGCGGAAGAAGGATCACTGCAAGACAGAGATTTTGTGGAAGAGGT
TCGGGAAAAAATCGTGGAGAACTTTAGGGAGAGGATGCAGCTTCGCCGCT
CGCTGATCGAGCTCGAGGATCAGAACGTTCAGAACAGCATAGAGGCAAGT
GACCAGTATGTTCGGGAAAAAATCGTGGAGAACTTTAGGGAGAGGATGCA
GCTTCGCCGCTCGCTGATCGAGCTCGAGGATCAGAACGTTCAGAACAGCA
TAGAGGCAAGTGACCAGTATGTCGGCAAGCGACAACTGTCGCTGGTTGAG
TGGCATAATGGGAGACGGCTTCCCCAGGAGGTAGCCAACGATGCGTTACA
AGGTCGGCAAGCGACAACTGTCGCTGGTTGAGTGGCATAATGGGAGACGG
CTTCCCCAGGAGGTAGCCAACGATGCGTTACAAGGTCTAACGAGGCATGG
CGGCTGGGCAGAGGCGGTTGCTGCAGCAGCGGAGGCAGCAGCCAGTGGAG
GCTTCTGGCGGGGGGAGGCAACGGATGAACAGGATGACAAACGGGCCTCT
CATTCTCCGCCATCCGAGGTACGGATGGCGTGGAGGGAATGCGAGCAGCT
GAGCAGCGCTATATCGAAGAACAACGAGATTAAGCGCAAGATATCGCGAC
GACTGCGAAATAACAGCCGTCAGGCAGAGAAGCTGAAGTCGAACCTCGAC
GGCAAGGTCTAACGAGGCATGGCGGCTGGGCAGAGGCGGTTGCTGCAGCA
GCGGAGGCAGCAGCCAGTGGAGGCTTCTGGCGGGGGGAGGCAACGGATGA
ACAGGATGACAAACGGGCCTCTCATTCTCCGCCATCCGAGGTACGGATGG
CGTGGAGGGAATGCGAGCAGCTGAGCAGCGCTATATCGAAGAACAACGAG
ATTAAGCGCAAGATATCGCGACGACTGCGAAATAACAGCCGTCAGGCAGA
GAAGCTGAAGTCGAACCTCGACGGCAAGATGACGGGAGAGGACCGAAACC
AGCTAATGAAGCTTCAATATCGTATAGGCAAACTTGAATTGGACAACATG
GAGCTCGAGCAAAGTCGAATCGTGCACGAGAGCGCCATGCGAGGGAAGGA
TCTGACAATACAGAAGCTGCAATTGCAGGTGATGACGGGAGAGGACCGAA
ACCAGCTAATGAAGCTTCAATATCGTATAGGCAAACTTGAATTGGACAAC
ATGGAGCTCGAGCAAAGTCGAATCGTGCACGAGAGCGCCATGCGAGGGAA
GGATCTGACAATACAGAAGCTGCAATTGCAGGTG
back to top