prot_H-paniculata_contig8577.16544.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig8577.16544.1
Unique Nameprot_H-paniculata_contig8577.16544.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length105
Homology
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BLAST of mRNA_H-paniculata_contig8577.16544.1 vs. uniprot
Match: D8LN24_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN24_ECTSI)

HSP 1 Score: 67.0 bits (162), Expect = 5.160e-11
Identity = 58/107 (54.21%), Postives = 64/107 (59.81%), Query Frame = 0 
Query:    1 RYCYDDGHPEWE-TDTGSAIDQGSLAG--FPLPKDA------SSRFSAGPRSQASFAAPSVAASGLSAQSSVITAHRSITSRTNFPPPGGLAGSPPFGPGGRPAAGA 98
            +Y  DDG  +W  TD   A   GS+ G  FPL K        SSRFSAGPRSQASFAA SVAASG S QSSV     S  SR+NFPP GG+  SPP+  GG    GA
Sbjct:  151 KYYEDDGTSDWGGTDLTGAAMGGSILGPEFPLRKGMVGGGGPSSRFSAGPRSQASFAANSVAASGRSVQSSVTIGGAS--SRSNFPPRGGI--SPPYSLGGAGGGGA 253
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BLAST of mRNA_H-paniculata_contig8577.16544.1 vs. uniprot
Match: A0A6H5KYX6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYX6_9PHAE)

HSP 1 Score: 62.0 bits (149), Expect = 4.430e-9
Identity = 58/111 (52.25%), Postives = 66/111 (59.46%), Query Frame = 0 
Query:    4 YDDGH-PEWE-TDTGSAIDQGSLAG--FPLPKDA------SSRFSAGPRSQASFAAPSVAASGLSAQSSVITAHRSITSRTNFPPPGGLAGSPPFGPGGRPAAGAGITAIG 104
            Y+DG   +W  TD   A   GS+ G  FPL K        SSRFSAGPRSQASFAA SVAASG S QSSV T   S  SR+NFPP GG   SPP+  GG  +   G+  +G
Sbjct:  187 YEDGDMSDWGGTDLTGAAMGGSILGPEFPLRKGMVGGGGPSSRFSAGPRSQASFAANSVAASGRSIQSSVTTGGAS--SRSNFPPRGGT--SPPYSLGGGASPLRGLARVG 293
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8577.16544.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LN24_ECTSI5.160e-1154.21Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KYX6_9PHAE4.430e-952.25Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8577contigH-paniculata_contig8577:3615..5121 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8577.16544.1mRNA_H-paniculata_contig8577.16544.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig8577 3615..5121 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig8577.16544.1 ID=prot_H-paniculata_contig8577.16544.1|Name=mRNA_H-paniculata_contig8577.16544.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=105bp
RYCYDDGHPEWETDTGSAIDQGSLAGFPLPKDASSRFSAGPRSQASFAAP
SVAASGLSAQSSVITAHRSITSRTNFPPPGGLAGSPPFGPGGRPAAGAGI
TAIGG
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