prot_H-paniculata_contig8489.16469.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig8489.16469.1
Unique Nameprot_H-paniculata_contig8489.16469.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length907
Homology
BLAST of mRNA_H-paniculata_contig8489.16469.1 vs. uniprot
Match: A0A6H5JM19_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM19_9PHAE)

HSP 1 Score: 235 bits (599), Expect = 9.930e-61
Identity = 302/674 (44.81%), Postives = 341/674 (50.59%), Query Frame = 0
Query:   55 EAASDRESLVVLRNACDACHRMKRKCDGLQPCNRCRRRSRPCGYSYKQKSGPPKGSKRKLIAADEDLLENRQGRPKLLPL-AMWPKDAEEE-----RMTNAAVAANAHRINQLIAVSTQTPPAQKPPQPPRLPGISIPPEGRASNGAGXXXXXXXXXXXXXVNNAGCSPRPESTSNATLGSLEQTNSSXXXXXXXXXXXXXXXXXXXXXNXXXXXKXXXANAAHEVNAXXXXXXXXXXXQELDDRHAVNRLALPPEAAQLSLEARAGAYKRAQEAAAAGMAAAKAFVEDGYRKDDKDETTAANGAGVAPTTSTTVEQSPHQKQGVLGRLVS---------------------TSAPTEAKAMPLPLASVATFQPTTT---GNLASPHENPAP-SVAMLPLNFSPPRGTSAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGQVAHPGMAAGGLPLPSGMPPGMPHMGMTMAYHPQYGVYQPYPQSLYAAYLAQYQLQHGLNPYDGIPL--YDGIN-----------------------PYLNAVYGHVGAPGVAVGTPGVEAGQAQQGLAGVTA-----------------------------ACPPLSVTAXXXXXXXXXXXXXXXXXXEKAQPKESEEAKQLAVETLLGLKNSQGSKGDAP-DEASAQ 642
            +  +DR+++VVLR+ACDACHRMKRKCDGLQPCNRCRRRSRPCGYSYKQKSGPPKGSKRKLIAADEDLLENRQ RPKL+ +  MWPKDA+++             A AH         T                + +   G A+  AG       XXXXXX                           XXXXXXXXXXXXXXXXXXXXX XXXXX    A  A   +       XXXXX+ + D      L LP  AAQLSLEARAGAY+RAQEAAAAGMAAA+AFVE  Y  D   E  +A    + PT      Q   QKQG                            +S            AS+AT   TT    G +++P  +  P S A LP    PP               XXXXXXXXXXXXXXXXXXXXXXX     HPGM       P GM PGM   G+ MAYHPQYG+Y PYPQSLYAAYLAQYQLQ G+NPY+G+ +  Y+G+N                       P          A G A  TP    G                                        A PP +V AXXXXXXXX          EK + KE+E+AKQLAVETLLGLKNSQGSKG  P DEASAQ
Sbjct:  172 DVTNDRDTMVVLRSACDACHRMKRKCDGLQPCNRCRRRSRPCGYSYKQKSGPPKGSKRKLIAADEDLLENRQSRPKLIQVPTMWPKDAQQQGHAAXXXXXXXXXATAHAXXXXXXXXT----------------MHVAAGGEAALNAGAPSAGTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPGAAKRASPKSGGVKPRHXXXXXRPIAD------LVLPSGAAQLSLEARAGAYRRAQEAAAAGMAAARAFVEGEYPTDGSGEFLSAKSTAL-PT-----GQPGGQKQGATAAXXXXXXXXXXXXXXXXXXXVPSALSSPXXXXXXXEXASASLATAMDTTAATGGGVSAPCTSAPPGSAAGLP----PPAAVGVPSTATGADQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPGMP------PQGMAPGM---GVPMAYHPQYGMYSPYPQSLYAAYLAQYQLQQGINPYEGMSINPYEGMNXXXXXXXXXXXXXXXXXXXXXXSPATTTSPAAAAAAGAAP-TPAXXGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLALPP-AVAAXXXXXXXX----------EKPRRKENEDAKQLAVETLLGLKNSQGSKGGGPMDEASAQ 792          
BLAST of mRNA_H-paniculata_contig8489.16469.1 vs. uniprot
Match: D8LM00_ECTSI (Zn(2)-C6 fungal-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM00_ECTSI)

HSP 1 Score: 203 bits (516), Expect = 6.770e-51
Identity = 272/661 (41.15%), Postives = 312/661 (47.20%), Query Frame = 0
Query:   55 EAASDRESLVVLRNACDACHRMKRKCDGLQPCNRCRRRSRPCGYSYKQKSGPPKGSKRKLIAADEDLLENRQGRPKLLPL-AMWPKDAEEERMTNAAVAANAHRINQLIAVSTQTPPAQKPPQPPRLPGISIPPEGRASNGAGXXXXXXXXXXXXXVNNAGCSPRPESTSNATLGSLEQTNSSXXXXXXXXXXXXXXXXXXXXXNXXXXXKXXXANAAHEVNAXXXXXXXXXXXQELDDRHAVNRLALPPEAAQLSLEARAGAYKRAQEAAAAGMAAAKAFVEDGYRKDDKDETTAANGAGVAPTTSTTVEQSPHQKQGVLGRLVSTSAPTEAKAMPLPLASVATFQPTTTGNLASPHENPAPSVAMLPLNFSPPRGTSAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------AGQVA---HPGMAAGGLPLPS-----GMPP-GM-PHMGMTMAYHPQYGVYQPYPQSLYAAYLAQYQLQHGLNPYDGIPLYDGINPY---------------------------LNAVYGHVGAPGVAVGTPGVEA-------GQAQQG-------------------LAGVTAACPPLSVTAXXXXXXXXXXXXXXXXXXEKAQPKESEEAKQLAVETLLGLKNSQGSKGDAP-DEASAQ 642
            +  +DR+++VVLR+ACDACHRMKRKCDGLQPCNRCRRRSRPCGYSYKQKSGPPKGSKRKLIAADEDLLENRQ RPKL+ +  MWPKDA+++   +AA                                              XXXXXXXXXXXXX   A     P   ++ + G+ ++ +                             K       H+                      +  L LP  AAQLSLEARAGAY+RAQEAAAAGMAAA+AFVE  Y  D   E  +A    + PT            QG      +T+AP+++                                                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        AG  A   HP  A  G          GMPP GM P MG+ MAYHPQYG+Y PYPQSLYAAYLAQYQLQ G+NPY+G+ +    NPY                                    A  VA   P   A       G A                      L GV     P +V AXXXXXXXX          EK + KE+E+AKQLAVETLLGLKNSQGSKG  P DEASAQ
Sbjct:  196 DVTNDRDTMVVLRSACDACHRMKRKCDGLQPCNRCRRRSRPCGYSYKQKSGPPKGSKRKLIAADEDLLENRQSRPKLIQVPTMWPKDAQQQG--HAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLAVAGGGPNGPTSPSPGAAKRASP----------------------------KSGGVKPRHKAGGV----------------RPIADLVLPSGAAQLSLEARAGAYRRAQEAAAAGMAAARAFVEGEYPTDGNGEFLSAKSTAL-PT-----------GQG------ATAAPSDSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKAGAPAPPQHPPAAGSGAXXXXXXXXXGMPPQGMAPGMGVPMAYHPQYGMYSPYPQSLYAAYLAQYQLQQGVNPYEGMSM----NPYEGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGAVATSAPAGGAXXXXXXXGPAPPAVSGXXXXXXXXXXXXXXXXLPGVKGLALPPAVAAXXXXXXXX----------EKPRRKENEDAKQLAVETLLGLKNSQGSKGGGPMDEASAQ 778          
BLAST of mRNA_H-paniculata_contig8489.16469.1 vs. uniprot
Match: D7FPF9_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPF9_ECTSI)

HSP 1 Score: 61.2 bits (147), Expect = 8.310e-6
Identity = 28/54 (51.85%), Postives = 37/54 (68.52%), Query Frame = 0
Query:   58 SDRESLVVLRNACDACHRMKRKCDGLQPCNRCRRRSRPCGYSYKQKSGPPKGSK 111
            S R+  + LR +CD C R+KR CDG  PC+ C RR +PC  S ++KSGP KG+K
Sbjct:   10 SRRDPTIELRKSCDYCVRLKRACDGKNPCSLCARRHKPCTRSARKKSGPAKGTK 63          
BLAST of mRNA_H-paniculata_contig8489.16469.1 vs. uniprot
Match: A0A6H5L009_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L009_9PHAE)

HSP 1 Score: 60.1 bits (144), Expect = 1.880e-5
Identity = 27/48 (56.25%), Postives = 34/48 (70.83%), Query Frame = 0
Query:   64 VVLRNACDACHRMKRKCDGLQPCNRCRRRSRPCGYSYKQKSGPPKGSK 111
            V LR +CD C R+KR CDG  PC+ C RR +PC  S ++KSGP KG+K
Sbjct:    8 VELRKSCDYCVRLKRACDGKNPCSLCARRHKPCTRSARKKSGPAKGTK 55          
BLAST of mRNA_H-paniculata_contig8489.16469.1 vs. uniprot
Match: F7W882_SORMK (WGS project CABT00000000 data, contig 2.43 n=1 Tax=Sordaria macrospora (strain ATCC MYA-333 / DSM 997 / K(L3346) / K-hell) TaxID=771870 RepID=F7W882_SORMK)

HSP 1 Score: 53.1 bits (126), Expect = 4.310e-5
Identity = 23/53 (43.40%), Postives = 31/53 (58.49%), Query Frame = 0
Query:   64 VVLRNACDACHRMKRKCDGLQPCNRCRRRSRPCGYSYKQKSGPPKGSKRKLIA 116
              ++ ACDACHR K KCDG+ PC  C      C Y+   +   PKGS+ K+I+
Sbjct:    3 TAVKRACDACHRRKVKCDGINPCRNCHASQLTCTYNAIPQKKGPKGSRAKVIS 55          
BLAST of mRNA_H-paniculata_contig8489.16469.1 vs. uniprot
Match: D8LPZ9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPZ9_ECTSI)

HSP 1 Score: 58.9 bits (141), Expect = 4.320e-5
Identity = 27/48 (56.25%), Postives = 33/48 (68.75%), Query Frame = 0
Query:   64 VVLRNACDACHRMKRKCDGLQPCNRCRRRSRPCGYSYKQKSGPPKGSK 111
            V+LR +CD C R+KR CDG  PC+ C RR   C  S K+KSGP KG+K
Sbjct:   60 VLLRKSCDLCVRLKRACDGKNPCHLCLRRRETCTRSVKRKSGPAKGTK 107          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8489.16469.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5JM19_9PHAE9.930e-6144.81Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
D8LM00_ECTSI6.770e-5141.15Zn(2)-C6 fungal-type domain-containing protein (Fr... [more]
D7FPF9_ECTSI8.310e-651.85Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
A0A6H5L009_9PHAE1.880e-556.25Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
F7W882_SORMK4.310e-543.40WGS project CABT00000000 data, contig 2.43 n=1 Tax... [more]
D8LPZ9_ECTSI4.320e-556.25Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001138Zn(2)-C6 fungal-type DNA-binding domainSMARTSM00066gal4_2coord: 64..107
e-value: 1.2E-5
score: 34.8
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPFAMPF00172Zn_cluscoord: 69..103
e-value: 6.4E-7
score: 29.4
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPROSITEPS00463ZN2_CY6_FUNGAL_1coord: 69..96
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPROSITEPS50048ZN2_CY6_FUNGAL_2coord: 69..98
score: 10.271
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilyGENE3D4.10.240.10coord: 68..161
e-value: 3.7E-10
score: 42.0
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilySUPERFAMILY57701Zn2/Cys6 DNA-binding domaincoord: 65..104
NoneNo IPR availablePANTHERPTHR23202WASP INTERACTING PROTEIN-RELATEDcoord: 13..608
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 17..906
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 12..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..11
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..16

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8489contigH-paniculata_contig8489:1716..8219 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8489.16469.1mRNA_H-paniculata_contig8489.16469.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig8489 874..8231 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig8489.16469.1 ID=prot_H-paniculata_contig8489.16469.1|Name=mRNA_H-paniculata_contig8489.16469.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=907bp
MRVGVGGLVMSGAASAAGSPGLDVGREDESETEKAQQRKQLASRKESSRS
QQPPEAASDRESLVVLRNACDACHRMKRKCDGLQPCNRCRRRSRPCGYSY
KQKSGPPKGSKRKLIAADEDLLENRQGRPKLLPLAMWPKDAEEERMTNAA
VAANAHRINQLIAVSTQTPPAQKPPQPPRLPGISIPPEGRASNGAGAAAA
AAAVAAASAVNNAGCSPRPESTSNATLGSLEQTNSSSNSNAAAAAAAVAA
AVAAATANAAANAKAAAANAAHEVNAANAATKAASDAQELDDRHAVNRLA
LPPEAAQLSLEARAGAYKRAQEAAAAGMAAAKAFVEDGYRKDDKDETTAA
NGAGVAPTTSTTVEQSPHQKQGVLGRLVSTSAPTEAKAMPLPLASVATFQ
PTTTGNLASPHENPAPSVAMLPLNFSPPRGTSAAGQPSSSPAAAAAAPGV
TAAPSATTRSAGSPSNAGQVAHPGMAAGGLPLPSGMPPGMPHMGMTMAYH
PQYGVYQPYPQSLYAAYLAQYQLQHGLNPYDGIPLYDGINPYLNAVYGHV
GAPGVAVGTPGVEAGQAQQGLAGVTAACPPLSVTAAAAAAIAAATQNAAA
AGGEKAQPKESEEAKQLAVETLLGLKNSQGSKGDAPDEASAQAMAAVTAA
AVSAAAAAAEESVAHGTIAGTEHGSTASAAAAAAAATAKAVAEAVAAAGG
LSTQMSPDQGSLNLPLVGEGKDTAGAATLLAESKQTLAAANGTEVTMLPS
GGTIYVGAVQAPVETEAKEVPKDDASGNNGHVVASNSAALARVEGGAEVL
SPQQWAPLHGGPEEASAGRRGEAAGGEVATAVRVASVAEPVRGEGSTETP
LSAVPAEARLPVAGAGAKVGHDAVTSAEPRAPAAATAESGISAAPHQTPR
TIVSTV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001138Zn2-C6_fun-type_DNA-bd
IPR036864Zn2-C6_fun-type_DNA-bd_sf