mRNA_H-paniculata_contig8470.16460.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig8470.16460.1 vs. uniprot
Match: D7FXH9_ECTSI (Centrosomal protein 120 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXH9_ECTSI) HSP 1 Score: 176 bits (446), Expect = 1.120e-47 Identity = 95/140 (67.86%), Postives = 114/140 (81.43%), Query Frame = 3
Query: 114 RDQALEEKWAVRETAQRRDMTQVQQEYGKLEGKLRKALSEVEARERGLKTREEAWRTEHTHKVSELQLLQRRLREETKHQVDLEHMKVKSLEKQLKSQSKGPEDA*ARVAATDQDFERFRQQVRKTSEGGLRQEFVSIGS 533
+D+ALE+KW RE +RR+++ Q +Y KLEGKLRKALSEV ARER LK REE+W+T+H K+SELQLLQRRLREETKHQVDLE MKVK+LEKQ+ S +K EDA AR AATD+D ERFRQQ R+T EGGLRQE +G+
Sbjct: 1037 KDEALEQKWEAREATRRRELSHAQADYSKLEGKLRKALSEVGARERQLKAREESWKTDHAQKLSELQLLQRRLREETKHQVDLERMKVKALEKQVASHAKSLEDARARAAATDEDLERFRQQQRRTPEGGLRQEVYRLGA 1176
BLAST of mRNA_H-paniculata_contig8470.16460.1 vs. uniprot
Match: A0A7S2SG35_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SG35_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 2.110e-17 Identity = 55/134 (41.04%), Postives = 83/134 (61.94%), Query Frame = 3
Query: 126 LEEKWAVRETAQRRDMTQVQQEYGKLEGKLRKALSEVEARERGLKTREEAWRTEHTHKVSELQLLQRRLREETKHQVDLEHMKVKSLEKQLKSQSKGPEDA*ARVAATDQDFERFRQQVRKTSEGGLRQEFVSI 527
+EE+ RE + + + Q++Y KLE +LR+AL +VEAR+R L EE R +H K+SELQLLQRRLRE+++H+V+LE + +E +L S + + A + +F+RFR+ RKT E LR E +
Sbjct: 349 IEEQAQAREHDRLASVARTQEDYKKLESRLRRALQDVEARKRKLAAAEEDLRQQHAQKLSELQLLQRRLREDSRHEVELERQRRVQVEHKLSSAEEEIQHGQALLKEVQDEFQRFREANRKTPEAALRAELARV 482
BLAST of mRNA_H-paniculata_contig8470.16460.1 vs. uniprot
Match: A0A6H5LE02_9PHAE (DUF3668 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LE02_9PHAE) HSP 1 Score: 80.9 bits (198), Expect = 1.990e-14 Identity = 43/60 (71.67%), Postives = 49/60 (81.67%), Query Frame = 3
Query: 354 VDLEHMKVKSLEKQLKSQSKGPEDA*ARVAATDQDFERFRQQVRKTSEGGLRQEFVSIGS 533
VDLE MKVK+LEKQ+ SQSK EDA ARVAATD+D ERFRQQ R+T EGGLRQE +G+
Sbjct: 760 VDLERMKVKALEKQVASQSKSLEDARARVAATDEDLERFRQQQRRTPEGGLRQEVYRLGA 819
BLAST of mRNA_H-paniculata_contig8470.16460.1 vs. uniprot
Match: A0A835Z851_9STRA (DUF3668 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z851_9STRA) HSP 1 Score: 77.4 bits (189), Expect = 3.170e-13 Identity = 52/129 (40.31%), Postives = 69/129 (53.49%), Query Frame = 3
Query: 114 RDQALEEKWAVRETAQRRDMTQVQQEYGKLEGKLRKALSEVE------------------------------------ARERGLKTREEAWRTEHTHKVSELQLLQRRLREETKHQVDLEHMKVKSLEK 392
+D ALE++WA R +RR + Q Q EY +LEGKLR+AL++VE ARER L+ REE R+E K SE+Q+ QRRLREE+KHQ DL ++V LE+
Sbjct: 942 KDAALEQRWAQRXAERRRSLAQAQAEYARLEGKLRRALTDVEVRGALAAASCGAXXXXXXXXXXSGAEPIPGFRSSDPARERALRAREEELRSEAAQKASEMQMAQRRLREESKHQADLHKLRVAELER 1070
BLAST of mRNA_H-paniculata_contig8470.16460.1 vs. uniprot
Match: A0A6H5JVP1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVP1_9PHAE) HSP 1 Score: 76.3 bits (186), Expect = 7.890e-13 Identity = 43/54 (79.63%), Postives = 46/54 (85.19%), Query Frame = 3
Query: 195 GKLEGKLRKALSEVEARERGLKTREEAWRTEHTHKVSELQLLQRRLREETKHQV 356
GKLEGKLRKALSEVEAR R L REE+W T+H K+SELQLLQRR REETKHQV
Sbjct: 994 GKLEGKLRKALSEVEARGRQLNAREESWTTDHAQKLSELQLLQRRPREETKHQV 1047
BLAST of mRNA_H-paniculata_contig8470.16460.1 vs. uniprot
Match: F0YAF2_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YAF2_AURAN) HSP 1 Score: 73.2 bits (178), Expect = 9.870e-12 Identity = 54/142 (38.03%), Postives = 79/142 (55.63%), Query Frame = 3
Query: 90 WLFCCGERRDQALE--EKWAVRETAQRRDMTQV-QQEYGKLEGKLRKALSEVEARERGLKTREEAWRTEHTHKVSELQLLQRRLREETKHQVDLEHMKVKSLEKQLKSQSKGPEDA*ARVAATDQDFERFRQQVRKTSEGGL 506
W E+ Q ++ E+ A AQ R+ T +QEYG+LE KLR +L +VE RER L + A + E KV +LQ+L++RLR+E+KH ++ E K++EK L + A R D DF+R+R R+T E L
Sbjct: 2400 WALRLREKERQIVDKVERDAEERLAQDRNATMAHRQEYGRLEAKLRASLRDVEQRERALGDADAAMKRERASKVLDLQMLEKRLRDESKHSIEAEVRARKAVEKALSGARASLDRAEKRAVQADADFDRWRAAHRRTPEAEL 2541
BLAST of mRNA_H-paniculata_contig8470.16460.1 vs. uniprot
Match: A0A7S3Y741_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y741_HETAK) HSP 1 Score: 67.8 bits (164), Expect = 4.250e-11 Identity = 43/113 (38.05%), Postives = 62/113 (54.87%), Query Frame = 3
Query: 189 EYGKLEGKLRKALSEVEARERGLKTREEAWRTEHTHKVSELQLLQRRLREETKHQVDLEHMKVKSLEKQLKSQSKGPEDA*ARVAATDQDFERFRQQVRKTSEGGLRQEFVSI 527
E LE +LRKAL+E E ++R + E ++SELQL+QRR+REE KHQVDLE ++ +LE+ +DF R+R+ RKT EG LR + ++
Sbjct: 2 EAAALEARLRKALAEAEGQQRAAAAARQKDADEAARRLSELQLMQRRVREEAKHQVDLERLRASALEQXXXXXXXXXXXXXXXXXXXXEDFFRYREAQRKTPEGALRAQIATL 114
BLAST of mRNA_H-paniculata_contig8470.16460.1 vs. uniprot
Match: A0A7S3JXI3_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JXI3_9STRA) HSP 1 Score: 70.1 bits (170), Expect = 1.070e-10 Identity = 44/111 (39.64%), Postives = 65/111 (58.56%), Query Frame = 3
Query: 189 EYGKLEGKLRKALSEVEARERGLKTREEAWRTEHTHKVSELQLLQRRLREETKHQVDLEHMKVKSLEKQLKSQSKGPEDA*ARVAATDQDFERFRQQVRKTSEGGLRQEFV 521
EY +LE KLR +L +VEARER L + + + E +VSELQLL++RLR+E +H ++ E K L L +++ E A R A + DF+R+R R+T E L +
Sbjct: 792 EYARLEAKLRASLKDVEARERALNDADASLKRERAVRVSELQLLEKRLRDEARHAIEAEKRNSKQLAATLTARNAAIERAERRALAAEADFDRWRTAHRRTPEAELTNKLA 902
BLAST of mRNA_H-paniculata_contig8470.16460.1 vs. uniprot
Match: A0A7S2S7F9_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2S7F9_9STRA) HSP 1 Score: 68.9 bits (167), Expect = 2.450e-10 Identity = 43/138 (31.16%), Postives = 79/138 (57.25%), Query Frame = 3
Query: 114 RDQALEEKWAVRETAQRRDMTQVQQEYGKLEGKLRKALSEVEARERGLKTREEAWRTEHTHKVSELQLLQRRLREETKHQVDLEHMKVKSLEKQLKSQSKGPEDA*ARVAATDQDFERFRQQVRKTSEGGLRQEFVSI 527
R LE++WA RE + + Q+++ +LE ++ + +++ E RER + E + ++++L++L RR REET+HQV+L K +LE ++K + E + R + DF FR++VRK+ E L++E +
Sbjct: 355 RMSELEQEWARREHERASALKLAQEQFKQLEERMHRTITDAERRERAVARLESELQRSAEQRMADLEVLNRRAREETEHQVNLHKNKSFALEGEVKRLRQALEQSEKRYRKVEDDFAEFREKVRKSPEAALQREIAQL 492
BLAST of mRNA_H-paniculata_contig8470.16460.1 vs. uniprot
Match: A0A7S2WKF3_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WKF3_9STRA) HSP 1 Score: 68.9 bits (167), Expect = 2.680e-10 Identity = 43/138 (31.16%), Postives = 79/138 (57.25%), Query Frame = 3
Query: 114 RDQALEEKWAVRETAQRRDMTQVQQEYGKLEGKLRKALSEVEARERGLKTREEAWRTEHTHKVSELQLLQRRLREETKHQVDLEHMKVKSLEKQLKSQSKGPEDA*ARVAATDQDFERFRQQVRKTSEGGLRQEFVSI 527
R LE++WA RE + + Q+++ +LE ++ + +++ E RER + E + ++++L++L RR REET+HQV+L K +LE ++K + E + R + DF FR++VRK+ E L++E +
Sbjct: 830 RMSELEQEWARREHERASALKLAQEQFKQLEERMHRTITDAERRERAVARLESELQRSAEQRMADLEVLNRRAREETEHQVNLHKNKSFALEGEVKRLRQALEQSEKRYRKVEDDFAEFREKVRKSPEAALQREIAQL 967 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8470.16460.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig8470.16460.1 >prot_H-paniculata_contig8470.16460.1 ID=prot_H-paniculata_contig8470.16460.1|Name=mRNA_H-paniculata_contig8470.16460.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=125bp MLLCIHVCDVVWLFCCGERRDQALEEKWAVRETAQRRDMTQVQQEYGKLEback to top mRNA from alignment at H-paniculata_contig8470:5499..8587+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig8470.16460.1 ID=mRNA_H-paniculata_contig8470.16460.1|Name=mRNA_H-paniculata_contig8470.16460.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3089bp|location=Sequence derived from alignment at H-paniculata_contig8470:5499..8587+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig8470:5499..8587+ >mRNA_H-paniculata_contig8470.16460.1 ID=mRNA_H-paniculata_contig8470.16460.1|Name=mRNA_H-paniculata_contig8470.16460.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=750bp|location=Sequence derived from alignment at H-paniculata_contig8470:5499..8587+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |