prot_H-paniculata_contig8460.16456.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig8460.16456.1
Unique Name	prot_H-paniculata_contig8460.16456.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	170

Homology

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BLAST of mRNA_H-paniculata_contig8460.16456.1 vs. uniprot
Match: D7G8S5_ECTSI (V-type proton ATPase proteolipid subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8S5_ECTSI)

HSP 1 Score: 247 bits (630), Expect = 1.670e-81
Identity = 137/164 (83.54%), Postives = 145/164 (88.41%), Query Frame = 0

Query:    6 LETCPSSASFFGYMGVASAMVFGNIGAAYGTAKSGVGISSMGVMNPGLVMRNIIPVVMAGVLGIYGLIVAVILSGSISPPTDEGNAFSSYSGYAFLAAGLSCGLSGLSAGMAIGIVGDAGVRAVGQQERLFVGMILILIFAEALGLYGMIVALILSQSSYYCSA 169
            +ETCPSSA+FFG+MGVAS+MVFGNIGAAYGTAKSGVGISSMGVMNPGLVMRNIIPVVMAGVLGIYGLIVAVILSG+I  P+D GN FSS+SGYAFLAAGL CGLSG           DAGVRAVGQQERLFVGMILILIFAEALGLYGMIVALILSQ SY C +
Sbjct:    1 METCPSSAAFFGFMGVASSMVFGNIGAAYGTAKSGVGISSMGVMNPGLVMRNIIPVVMAGVLGIYGLIVAVILSGAIGMPSDTGNTFSSFSGYAFLAAGLCCGLSGXXXXXXXXXXXDAGVRAVGQQERLFVGMILILIFAEALGLYGMIVALILSQQSYSCDS 164

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BLAST of mRNA_H-paniculata_contig8460.16456.1 vs. uniprot
Match: A0A835Z1C3_9STRA (V-type proton ATPase proteolipid subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1C3_9STRA)

HSP 1 Score: 233 bits (593), Expect = 8.220e-76
Identity = 133/167 (79.64%), Postives = 143/167 (85.63%), Query Frame = 0

Query:    3 SISLETCPSSASFFGYMGVASAMVFGNIGAAYGTAKSGVGISSMGVMNPGLVMRNIIPVVMAGVLGIYGLIVAVILSGSISPP-TDEGNAFSSYSGYAFLAAGLSCGLSGLSAGMAIGIVGDAGVRAVGQQERLFVGMILILIFAEALGLYGMIVALILSQSSYYCS 168
            S SLETCPSSA+FFG+MG A+A+VF NIGAAYGTAKSGVGISSMGVMNPGLVMRNIIPVVMAGVLGIYGLIVAVIL GSI+ P T++   FSS+SGYAFLAAGL CGLSG           DAGVRAVGQQERLFVGMILILIFAEAL LYG+IVALILSQ SY C+
Sbjct:    2 SSSLETCPSSAAFFGFMGTAAALVFSNIGAAYGTAKSGVGISSMGVMNPGLVMRNIIPVVMAGVLGIYGLIVAVILQGSITQPDTEQNTKFSSFSGYAFLAAGLCCGLSGXXXXXXXXXXXDAGVRAVGQQERLFVGMILILIFAEALALYGLIVALILSQQSYSCA 168

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BLAST of mRNA_H-paniculata_contig8460.16456.1 vs. uniprot
Match: F0YK80_AURAN (V-type proton ATPase proteolipid subunit n=2 Tax=Pelagomonadales TaxID=54409 RepID=F0YK80_AURAN)

HSP 1 Score: 219 bits (559), Expect = 1.400e-70
Identity = 128/168 (76.19%), Postives = 140/168 (83.33%), Query Frame = 0

Query:    4 ISLETCPSSASFFGYMGVASAMVFGNIGAAYGTAKSGVGISSMGVMNPGLVMRNIIPVVMAGVLGIYGLIVAVILSGSISPPTDEGNA----FSSYSGYAFLAAGLSCGLSGLSAGMAIGIVGDAGVRAVGQQERLFVGMILILIFAEALGLYGMIVALILSQSSYYC 167
            +S ETCP+SA FFG+MGV SA+VF NIGAAYGTAKSGVGI+SMGVMNPGLVMRNIIPVVMAGVLGIYGLIVAVIL G+I+ P D G+     FSS+SGYA+LAAGL CGLSG           DAGVRAVGQQE+LFVGMILILIFAEALGLYG+IVALILSQ S  C
Sbjct:    5 LSTETCPTSAPFFGFMGVTSALVFANIGAAYGTAKSGVGIASMGVMNPGLVMRNIIPVVMAGVLGIYGLIVAVILQGAITKP-DAGSGGTTKFSSFSGYAYLAAGLCCGLSGXXXXXXXXXXXDAGVRAVGQQEKLFVGMILILIFAEALGLYGLIVALILSQQSADC 171

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BLAST of mRNA_H-paniculata_contig8460.16456.1 vs. uniprot
Match: A0A7S3GT47_9STRA (V-type proton ATPase proteolipid subunit n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GT47_9STRA)

HSP 1 Score: 219 bits (558), Expect = 2.060e-70
Identity = 122/166 (73.49%), Postives = 142/166 (85.54%), Query Frame = 0

Query:    4 ISLETCPSSASFFGYMGVASAMVFGNIGAAYGTAKSGVGISSMGVMNPGLVMRNIIPVVMAGVLGIYGLIVAVILSGSISPPTDEG-NAFSSYSGYAFLAAGLSCGLSGLSAGMAIGIVGDAGVRAVGQQERLFVGMILILIFAEALGLYGMIVALILSQSSYYCS 168
            +S ETCP+SA FFG+MGV +A+ F NIGAAYGTAKSGVGI+SMGVM+PGLVM+NIIPVVMAGVLGIYGLIVAVI+ GSI+ P+ +G   +SS++GYA L+AGL CGLSGL         GDAGVRAVGQQE+LFVGMILILIFAEALGLYG+IVALILSQ S+ C+
Sbjct:    5 VSRETCPTSAPFFGFMGVTAALCFANIGAAYGTAKSGVGIASMGVMHPGLVMKNIIPVVMAGVLGIYGLIVAVIIQGSITVPSADGATKYSSFTGYAHLSAGLCCGLSGLXXXXXXXXXGDAGVRAVGQQEKLFVGMILILIFAEALGLYGLIVALILSQQSFSCA 170

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BLAST of mRNA_H-paniculata_contig8460.16456.1 vs. uniprot
Match: A0A7S2RWN8_9STRA (V-type proton ATPase proteolipid subunit n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RWN8_9STRA)

HSP 1 Score: 213 bits (542), Expect = 4.160e-68
Identity = 119/161 (73.91%), Postives = 135/161 (83.85%), Query Frame = 0

Query:    7 ETCPSSASFFGYMGVASAMVFGNIGAAYGTAKSGVGISSMGVMNPGLVMRNIIPVVMAGVLGIYGLIVAVILSGSISPPTDEGNAFSSYSGYAFLAAGLSCGLSGLSAGMAIGIVGDAGVRAVGQQERLFVGMILILIFAEALGLYGMIVALILSQSSYYC 167
            E CP+SA FFG+MGV++A+VF NIGAAYGTAKSGVGI+SMGVM P LVMRNIIPV+MAGVLGIYGLIVAVIL+GSI+ P +  + FSS+SG+AFLAAGL CGLSG            AGVRAVGQQE+LFVG+ILILIFAEALGLYG+IVALILSQ S  C
Sbjct:    4 ELCPTSAPFFGFMGVSAALVFANIGAAYGTAKSGVGIASMGVMKPNLVMRNIIPVIMAGVLGIYGLIVAVILNGSITKPANNESKFSSFSGFAFLAAGLCCGLSGXXXXXXXXXXXXAGVRAVGQQEKLFVGVILILIFAEALGLYGLIVALILSQQSVSC 164

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BLAST of mRNA_H-paniculata_contig8460.16456.1 vs. uniprot
Match: A0A4D9DE12_9STRA (V-type proton ATPase proteolipid subunit n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DE12_9STRA)

HSP 1 Score: 213 bits (541), Expect = 8.750e-68
Identity = 116/168 (69.05%), Postives = 139/168 (82.74%), Query Frame = 0

Query:    6 LETCPSSASFFGYMGVASAMVFGNIGAAYGTAKSGVGISSMGVMNPGLVMRNIIPVVMAGVLGIYGLIVAVILSGSISPPTDEGNA----FSSYSGYAFLAAGLSCGLSGLSAGMAIGIVGDAGVRAVGQQERLFVGMILILIFAEALGLYGMIVALILSQSSYYCSA 169
            LE CP+SA FFG+MGV +A+VF N+G+AYGTAKSGVGISSMGVMNPGLVMRN+IPVV+AG+LGIYGLIV+VI++G+I+ P   G+     +S YSG+A LAAGL+CG           +VGDAGVRAVGQQERLFVGM+LILIFAEALGLYG+IV+LILSQ + YC A
Sbjct:    9 LEKCPASAPFFGFMGVTAAIVFANLGSAYGTAKSGVGISSMGVMNPGLVMRNVIPVVLAGILGIYGLIVSVIITGNIAAPASVGDTLQTKYSLYSGFAHLAAGLACGXXXXXXXXXXXVVGDAGVRAVGQQERLFVGMLLILIFAEALGLYGLIVSLILSQQNVYCQA 176

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BLAST of mRNA_H-paniculata_contig8460.16456.1 vs. uniprot
Match: A0A7S2WSL7_9STRA (V-type proton ATPase proteolipid subunit n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2WSL7_9STRA)

HSP 1 Score: 213 bits (541), Expect = 9.980e-68
Identity = 121/170 (71.18%), Postives = 140/170 (82.35%), Query Frame = 0

Query:    1 MSSISLETCPSSASFFGYMGVASAMVFGNIGAAYGTAKSGVGISSMGVMNPGLVMRNIIPVVMAGVLGIYGLIVAVILSGSI-SPPTDEGNAFSSYSGYAFLAAGLSCGLSGLSAGMAIGIVGDAGVRAVGQQERLFVGMILILIFAEALGLYGMIVALILSQSSYYCSA 169
            +S    E+CPS A F+G+MGVA A+V  NIGAA+GTAKSGVGI++MGV NPGLVMRNIIPVVMAGVLGIYGLIV+VI+ GSI S    + N +S Y+    LAAGL CGLS L+AG AIGIVGD GVRAVG+QE+LFVGMILILIFAEALGLYG+IVALILSQS + C +
Sbjct:    6 LSDFEFESCPSYAPFYGFMGVACALVLSNIGAAFGTAKSGVGITAMGVSNPGLVMRNIIPVVMAGVLGIYGLIVSVIIGGSIASARPQKNNMYSMYNAMKHLAAGLCCGLSCLAAGTAIGIVGDTGVRAVGRQEKLFVGMILILIFAEALGLYGLIVALILSQSGFTCGS 175

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BLAST of mRNA_H-paniculata_contig8460.16456.1 vs. uniprot
Match: A0A7S2GLL8_9STRA (V-type proton ATPase proteolipid subunit n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GLL8_9STRA)

HSP 1 Score: 211 bits (537), Expect = 3.220e-67
Identity = 119/165 (72.12%), Postives = 134/165 (81.21%), Query Frame = 0

Query:    3 SISLETCPSSASFFGYMGVASAMVFGNIGAAYGTAKSGVGISSMGVMNPGLVMRNIIPVVMAGVLGIYGLIVAVILSGSISPPTDEGNAFSSYSGYAFLAAGLSCGLSGLSAGMAIGIVGDAGVRAVGQQERLFVGMILILIFAEALGLYGMIVALILSQSSYYC 167
            S ++E CP+ A FFG+MGV+SA+VF NIGAAYGTAKSG+GI+SMGVM P LVMRNIIPV+MAGVLGIYGLIVAVIL GSI+ PT+    FSSYSG+AFLAAGL CGLSG             GVRAVGQQE+LFVG+ILILIFAEALGLYG+IVALILS   Y C
Sbjct:    7 STAVEACPTYAPFFGFMGVSSALVFANIGAAYGTAKSGIGIASMGVMKPELVMRNIIPVIMAGVLGIYGLIVAVILQGSITKPTEGVTKFSSYSGFAFLAAGLCCGLSGXXXXXXXXXXXXXGVRAVGQQEKLFVGVILILIFAEALGLYGLIVALILSMQIYEC 171

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BLAST of mRNA_H-paniculata_contig8460.16456.1 vs. uniprot
Match: A0A7S3LI96_9STRA (V-type proton ATPase proteolipid subunit n=2 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LI96_9STRA)

HSP 1 Score: 212 bits (540), Expect = 5.000e-67
Identity = 120/165 (72.73%), Postives = 135/165 (81.82%), Query Frame = 0

Query:    3 SISLETCPSSASFFGYMGVASAMVFGNIGAAYGTAKSGVGISSMGVMNPGLVMRNIIPVVMAGVLGIYGLIVAVILSGSISPPTDEGNAFSSYSGYAFLAAGLSCGLSGLSAGMAIGIVGDAGVRAVGQQERLFVGMILILIFAEALGLYGMIVALILSQSSYYC 167
            S+ +ETCP+SA FFG+MGV SA+VF NIGAAYGTAKSGVGISSMGVMNPGLVMRNIIPVVMAGVLGIYGLIVAVI+ GSI  P +  + +S Y+G+A LAAGL CGL               GVRAVGQQE+LFVGMILILIFAEALGLYG+IVALILSQ+S+ C
Sbjct:   51 SVEMETCPASAPFFGFMGVTSALVFANIGAAYGTAKSGVGISSMGVMNPGLVMRNIIPVVMAGVLGIYGLIVAVIIQGSILSPQNGLSQYSLYTGFAHLAAGLCCGLXXXXXXXXXXXXXXXGVRAVGQQEKLFVGMILILIFAEALGLYGLIVALILSQNSFVC 215

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BLAST of mRNA_H-paniculata_contig8460.16456.1 vs. uniprot
Match: A0A7S0GWL4_9EUKA (V-type proton ATPase proteolipid subunit n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0GWL4_9EUKA)

HSP 1 Score: 210 bits (534), Expect = 7.810e-67
Identity = 123/163 (75.46%), Postives = 139/163 (85.28%), Query Frame = 0

Query:    6 LETCPSSASFFGYMGVASAMVFGNIGAAYGTAKSGVGISSMGVMNPGLVMRNIIPVVMAGVLGIYGLIVAVILSGSISPPTDEGNAFSSYSGYAFLAAGLSCGLSGLSAGMAIGIVGDAGVRAVGQQERLFVGMILILIFAEALGLYGMIVALILSQSSYYCS 168
            L  C SSA FFG+MGVASA+VF N+GAAYGTAKSGVGI SMGVM+   VM+NIIPVVMAGVLGIYGLIVAVIL  ++S     G+ +S Y+GYA LA+GL+CGLSGL+A MAIGIVGDAGVRA  QQE+LFVGMILILIFAEALGLYG+IVALILSQSS  C+
Sbjct:    7 LFECTSSAPFFGFMGVASALVFANLGAAYGTAKSGVGIMSMGVMHHEAVMKNIIPVVMAGVLGIYGLIVAVILIQAVS-----GDTYSDYNGYAHLASGLACGLSGLAAXMAIGIVGDAGVRANAQQEKLFVGMILILIFAEALGLYGLIVALILSQSSENCT 164

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig8460.16456.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig8460.16456.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G8S5_ECTSI	1.670e-81	83.54	V-type proton ATPase proteolipid subunit n=1 Tax=E...	[more]
A0A835Z1C3_9STRA	8.220e-76	79.64	V-type proton ATPase proteolipid subunit n=1 Tax=T...	[more]
F0YK80_AURAN	1.400e-70	76.19	V-type proton ATPase proteolipid subunit n=2 Tax=P...	[more]
A0A7S3GT47_9STRA	2.060e-70	73.49	V-type proton ATPase proteolipid subunit n=1 Tax=S...	[more]
A0A7S2RWN8_9STRA	4.160e-68	73.91	V-type proton ATPase proteolipid subunit n=1 Tax=R...	[more]
A0A4D9DE12_9STRA	8.750e-68	69.05	V-type proton ATPase proteolipid subunit n=1 Tax=N...	[more]
A0A7S2WSL7_9STRA	9.980e-68	71.18	V-type proton ATPase proteolipid subunit n=1 Tax=E...	[more]
A0A7S2GLL8_9STRA	3.220e-67	72.12	V-type proton ATPase proteolipid subunit n=1 Tax=D...	[more]
A0A7S3LI96_9STRA	5.000e-67	72.73	V-type proton ATPase proteolipid subunit n=2 Tax=A...	[more]
A0A7S0GWL4_9EUKA	7.810e-67	75.46	V-type proton ATPase proteolipid subunit n=1 Tax=A...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000245	V-ATPase proteolipid subunit	PRINTS	PR00122	VACATPASE	coord: 32..56 score: 72.53 coord: 58..82 score: 68.11 coord: 139..162 score: 77.52 coord: 112..138 score: 77.49
IPR002379	V-ATPase proteolipid subunit C-like domain	PFAM	PF00137	ATP-synt_C	coord: 101..160 e-value: 1.2E-20 score: 73.6 coord: 19..78 e-value: 1.3E-11 score: 44.7
IPR011555	V-ATPase proteolipid subunit C, eukaryotic	TIGRFAM	TIGR01100	TIGR01100	coord: 15..126 e-value: 3.9E-45 score: 150.5
None	No IPR available	GENE3D	1.20.120.610		coord: 13..166 e-value: 1.8E-55 score: 188.6
None	No IPR available	PANTHER	PTHR10263	V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT	coord: 6..164
None	No IPR available	PANTHER	PTHR10263:SF5	V-TYPE PROTON ATPASE 16 KDA PROTEOLIPID SUBUNIT	coord: 6..164
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 135..160
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 79..97
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 15..37
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 124..134
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..14
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 161..169
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 38..57
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 58..78
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 98..123
None	No IPR available	TMHMM	TMhelix		coord: 135..157
None	No IPR available	TMHMM	TMhelix		coord: 58..80
None	No IPR available	TMHMM	TMhelix		coord: 15..37
None	No IPR available	TMHMM	TMhelix		coord: 100..122
IPR035921	F/V-ATP synthase subunit C superfamily	SUPERFAMILY	81333	F1F0 ATP synthase subunit C	coord: 93..161
IPR035921	F/V-ATP synthase subunit C superfamily	SUPERFAMILY	81333	F1F0 ATP synthase subunit C	coord: 14..78

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig8460	contig	H-paniculata_contig8460:4263..8549 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig8460.16456.1	mRNA_H-paniculata_contig8460.16456.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig8460 4159..10429 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig8460.16456.1 ID=prot_H-paniculata_contig8460.16456.1|Name=mRNA_H-paniculata_contig8460.16456.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=170bp
MSSISLETCPSSASFFGYMGVASAMVFGNIGAAYGTAKSGVGISSMGVMN
PGLVMRNIIPVVMAGVLGIYGLIVAVILSGSISPPTDEGNAFSSYSGYAF
LAAGLSCGLSGLSAGMAIGIVGDAGVRAVGQQERLFVGMILILIFAEALG
LYGMIVALILSQSSYYCSA*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000245	ATPase_proteolipid_csu
IPR002379	ATPase_proteolipid_c-like_dom
IPR011555	ATPase_proteolipid_su_C_euk
IPR035921	F/V-ATP_Csub_sf