prot_H-paniculata_contig846.16453.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig846.16453.1
Unique Nameprot_H-paniculata_contig846.16453.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length925
Homology
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BLAST of mRNA_H-paniculata_contig846.16453.1 vs. uniprot
Match: A0A836C7M7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7M7_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 2.770e-11
Identity = 46/111 (41.44%), Postives = 63/111 (56.76%), Query Frame = 0 
Query:  526 SKEALLHDVCEKWCTRSWR-PGLFLKVL---------------AFDGRSPGQGDAGEVRSPGSGAA-FALLKVVWETPTLAVLHVACFGLNSSRRADMMAELRREIWSAGG 619
            +K+ LL   C +WCTR+    GL+LK+L               A DG       A   R PGSG   FALLKV+WE P LAV+H+ACFG+ +  R  ++++L +EIW+ GG
Sbjct:  884 TKDQLLAAACRRWCTRALGLRGLYLKLLPPPPQHAHPRSSSTAAEDGAEVA---AARTRRPGSGCGCFALLKVLWEAPNLAVVHLACFGIPAQDRLSLLSDLAQEIWAGGG 991
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BLAST of mRNA_H-paniculata_contig846.16453.1 vs. uniprot
Match: A0A6H5KTQ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTQ7_9PHAE)

HSP 1 Score: 71.6 bits (174), Expect = 6.700e-9
Identity = 60/198 (30.30%), Postives = 83/198 (41.92%), Query Frame = 0 
Query:  105 GVVVVARFALAWRKNVRLDYCVTFKLQALSGPGEQSLASPGTADVTLEVLASIPFLLACRNPRAQYER-----------------------------------SSASSLLEFI--------DLLKKMDTMLEHLWATTPV--------------RFGGRELDERSAYRYRRLGSLSVDVWQRFFNTEYVEVIFRGILA 245
            G+ V ARF+LAWR +VR+DYC+ FK +       Q+LA PG A V +EV A   FL+  R    + +                                      A  L +F+        ++L K++   + L A+T +               F    LDER    Y  LG +SV  W RF N EYVEV+F G+LA
Sbjct: 1061 GMEVRARFSLAWRTDVRVDYCLEFKSE------HQALAMPGRATVFIEVHAPAHFLVDLRETTEEAKTRKRNQXXXXXXXXXXXXXXXXXXXXAVQQGAGGDGGGAVRLKDFLKTLEQVGDEMLIKIERTTQSLVASTALPLPSSSAAAAPGASNFPSARLDERLCRPYLWLGRISVPEWLRFLNIEYVEVMFSGLLA 1252
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig846.16453.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A836C7M7_9STRA2.770e-1141.44Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5KTQ7_9PHAE6.700e-930.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig846contigH-paniculata_contig846:149..10770 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig846.16453.1mRNA_H-paniculata_contig846.16453.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig846 148..10770 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig846.16453.1 ID=prot_H-paniculata_contig846.16453.1|Name=mRNA_H-paniculata_contig846.16453.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=925bp
PAGSSRGGPSPSGSAGYGYGESPGLSSGEISGGTAEGYGAGSSPEGETAS
IGRARSGGVASTAAPGAGGAAGGGNGGGRRESNVSSGSGGRSGAAGSGRG
GLAGGVVVVARFALAWRKNVRLDYCVTFKLQALSGPGEQSLASPGTADVT
LEVLASIPFLLACRNPRAQYERSSASSLLEFIDLLKKMDTMLEHLWATTP
VRFGGRELDERSAYRYRRLGSLSVDVWQRFFNTEYVEVIFRGILADENPD
EPELKSPGFSALSPRVPPAQSPSKHPDPSPGCRPLSRPLRGNSDVPAVTT
TTTTVAAAIMPGGVSPGASAGGGRGGGSNWSGFASSSSPRGGFEPSPLYL
PAAHAAAATYSAGSMMPVPGGGGGGASFMGTGQLGKGINNSNVISRHNSN
SISSSNVISSNSNRGMVPQLLPESVVRQTAESGLSGGVGTTGISGKVGRS
GRGGSVLVSGGNGSDDVCSTDRGGPPMTPTARTSDRGPGVSSGFGVGVGA
NNVGIAVRVRGGSLGEGQRVGAEMQSKEALLHDVCEKWCTRSWRPGLFLK
VLAFDGRSPGQGDAGEVRSPGSGAAFALLKVVWETPTLAVLHVACFGLNS
SRRADMMAELRREIWSAGGVVAAAQSSDTSGGNGGRRRVGASGEALSSFR
RTASTGTIVSSVVHGGEAVSEEHDELGVLTDKATQAVSIDCAIADGARSS
RDDDGQEVDAAGVEPPLMLTRTTSEGTGAAIALAARSVASVGAEVGAAVT
AVGRTFRTSSVSSKLTVNEGLLHKINTGLSGLETNIAFQLMRSRPPPEYV
PAAVAAAAAGATATGAVATARLEGLGVGPRRMGQASMGTAWVPVSTQLTA
GTGGIGGGCYQYFPAPIGTNQNHSWTTDGAPAMLRLPRRGGSQLPPPPPP
PPPLPPLPQEEGQQQHQHQQQQQQR
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