prot_H-paniculata_contig8457.16451.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig8457.16451.1
Unique Nameprot_H-paniculata_contig8457.16451.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length197
Homology
BLAST of mRNA_H-paniculata_contig8457.16451.1 vs. uniprot
Match: D7FMI5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMI5_ECTSI)

HSP 1 Score: 237 bits (604), Expect = 1.590e-76
Identity = 129/203 (63.55%), Postives = 155/203 (76.35%), Query Frame = 0
Query:    3 AAAPSWMQRQDGMSGERAAMNPMN---PGTGEPSSN-----SSEPEINQVRFAFRVAALVLGALMIVSSFVELFNMSSFTRFCIAIYNILFAAVLMLHESQGFVMCDGVDWNMRRYFGLLYGHMGRAIFIIFIAFLNFALTDAGWWGTCTGLLLLGLGGLMLVVYMQYPHLLDEAPGLGDLKTV-PPRPQGYAPPPAMPSTTL 196
            A+ PSWMQR D + GE            GT EP+++     +   + N VRF FRVA+L LG +MI+++F EL+N+SSFT F IA+YN+LFA VL+LHESQG +MCDGVD+ MRRYFGL+YGHMGRA+FIIFIAFLNFALTDAGW+ T TGLLLL  GG M+VV+ +YPHLLDEAPGLGDLKT  PPR   YAPPP MPST+L
Sbjct:    2 ASGPSWMQR-DQLQGEGLTATDGGIGADGTNEPNASYGAIKAEMTDTNAVRFGFRVASLALGLMMIIAAFTELWNLSSFTTFFIALYNLLFAGVLILHESQGLIMCDGVDYTMRRYFGLVYGHMGRALFIIFIAFLNFALTDAGWFATFTGLLLLLHGGAMIVVFTKYPHLLDEAPGLGDLKTTAPPRQDEYAPPPTMPSTSL 203          
BLAST of mRNA_H-paniculata_contig8457.16451.1 vs. uniprot
Match: A0A7S3NGQ3_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NGQ3_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 1.230e-13
Identity = 55/174 (31.61%), Postives = 91/174 (52.30%), Query Frame = 0
Query:    8 WMQRQDGMSGERAAMNPMNPGTG--EPSSNS--SEPEINQVRFAFRVAALVLGALMIVSSFVEL-----FNMSSFTRFCIAIYNILFAAVLMLHESQGFVMCDGVDWNMRRYFGLLYGHMGRAIFIIFIAFLNFALTDAGWWGTCTGLLLLGLGGLMLVVYMQYPHLLDEAPGL 172
            W+       G + A++PM   TG  +P +N   S+P    V + FR+    L  +M  +  + L      N +  + F I+ Y ILFA V    E+   +  D   ++++R FG L+  +G+AIFIIF+AFLNF + +    G  TG+L L  G L+++++++YPH     P +
Sbjct:   10 WLHDDYRGDGTQEAVSPMTGDTGLRQPQTNEFGSKP---MVIWGFRIVHFGLATMMAATGILSLTEFGRVNRNQLSAFVISFYLILFAVVWFAFETMFIMPIDYFIFHLKRNFGFLFHPLGKAIFIIFVAFLNFGVQEESL-GLATGILCLIDGALLVLLFLKYPHYHPLTPSI 179          
BLAST of mRNA_H-paniculata_contig8457.16451.1 vs. uniprot
Match: A0A7S2SJU5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SJU5_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 1.510e-13
Identity = 59/172 (34.30%), Postives = 90/172 (52.33%), Query Frame = 0
Query:    1 MAAAAPSWMQRQDGMSGERA-AMNPMNPGTGEPSSNSSEPEINQVRFAFRVAALVLGALMIVSSFVELFNM----SSFTRFCIAIYNILFAAVLMLHESQGFVMCDGVDWNMRRYFGLLYGHMGRAIFIIFIAFLNFALTDAGWWGTCTGLLLLGLGGLMLVVYMQYPHLLD 167
            MAA  P+WM        + A A  P N G+ E SSN+       VR A R+  + +  +M  +  + L N+    S  T   ++ Y +LFA+VL LHE       + V+  +R+ FG L+  +G+  F++FIAFLNF LTD+G  G  TG+ L  +G   + +Y++ P   D
Sbjct:    5 MAAEQPAWMNTPPAAPPQSAYAPPPSNYGSMESSSNARL----YVRAAIRLVVVGMCVMMSAAGALSLANLDNSNSVVTDVIVSCYVMLFASVLFLHEVNEMRRIELVESILRKNFGFLFKPLGKGCFMVFIAFLNFGLTDSGELGLATGICLCIVGFGYVGLYLRNPEYFD 172          
BLAST of mRNA_H-paniculata_contig8457.16451.1 vs. uniprot
Match: A0A4D9DAG1_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DAG1_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 1.380e-10
Identity = 39/92 (42.39%), Postives = 51/92 (55.43%), Query Frame = 0
Query:   76 FCIAIYNILFAAVLMLHESQGFVMCDGVDWNMRRYFGLLYGHMGRAIFIIFIAFLNFALTDAGWWGTCTGLLLLGLGGLMLVVYMQYPHLLD 167
            F +A+Y  + AA+L   E   F     +D   RR FG +YG  G+A++IIFIAFLNF L   G     TG++L   GGLML    +YP L  
Sbjct:   85 FFVALYMFISAAILFFFELCQFKYVAFIDNVFRRNFGFMYGSRGKALYIIFIAFLNFGLVSTGILQFATGIVLAVDGGLMLFATFKYPTLFS 176          
BLAST of mRNA_H-paniculata_contig8457.16451.1 vs. uniprot
Match: A0A2D4BSM8_PYTIN (Uncharacterized protein n=3 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BSM8_PYTIN)

HSP 1 Score: 54.3 bits (129), Expect = 1.450e-5
Identity = 40/116 (34.48%), Postives = 63/116 (54.31%), Query Frame = 0
Query:   44 VRFAFRVAALVLGALMIVSSFVELFNMSSFTRFCIAIYNILFAAVLMLHESQGFVMCDGVDWNMRRYFGLLYGHMGRAIFIIFIAFLNFALTDAGWWGTCTG--LLLLGLGGLMLV 157
            +RFA  V AL+LG    ++ F  +F +SS++ F + IY I  A  L+  E+        +   ++  FG ++  MG+A +I+ IAFL+F+    GW G+C G   LLL L    L+
Sbjct:   64 MRFANLVGALLLG----ITCFFRMFTVSSYSHFLVVIYLIFLALGLVFIENHE--QFPSIAEKVKLNFGFMFTAMGKAAYILSIAFLSFS---QGWIGSCLGAFFLLLALFNFFLI 170          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8457.16451.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FMI5_ECTSI1.590e-7663.55Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S3NGQ3_9STRA1.230e-1331.61Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S2SJU5_9STRA1.510e-1334.30Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A4D9DAG1_9STRA1.380e-1042.39Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A2D4BSM8_PYTIN1.450e-534.48Uncharacterized protein n=3 Tax=Pythium insidiosum... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013714Golgi apparatus membrane protein TVP15PFAMPF08507COPI_assoccoord: 46..162
e-value: 2.4E-13
score: 50.2
NoneNo IPR availablePANTHERPTHR38894FAMILY NOT NAMEDcoord: 36..164
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..45
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 112..133
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 134..138
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 139..159
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 92..111
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 46..67
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 73..91
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 160..196
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 68..72
NoneNo IPR availableTMHMMTMhelixcoord: 46..68
NoneNo IPR availableTMHMMTMhelixcoord: 111..133
NoneNo IPR availableTMHMMTMhelixcoord: 137..159
NoneNo IPR availableTMHMMTMhelixcoord: 72..91

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8457contigH-paniculata_contig8457:2963..9071 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8457.16451.1mRNA_H-paniculata_contig8457.16451.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig8457 2131..9144 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig8457.16451.1 ID=prot_H-paniculata_contig8457.16451.1|Name=mRNA_H-paniculata_contig8457.16451.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=197bp
MAAAAPSWMQRQDGMSGERAAMNPMNPGTGEPSSNSSEPEINQVRFAFRV
AALVLGALMIVSSFVELFNMSSFTRFCIAIYNILFAAVLMLHESQGFVMC
DGVDWNMRRYFGLLYGHMGRAIFIIFIAFLNFALTDAGWWGTCTGLLLLG
LGGLMLVVYMQYPHLLDEAPGLGDLKTVPPRPQGYAPPPAMPSTTL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013714Golgi_TVP15