mRNA_H-paniculata_contig8456.16450.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig8456.16450.1 vs. uniprot
Match: D7G2H2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2H2_ECTSI) HSP 1 Score: 564 bits (1453), Expect = 5.490e-194 Identity = 273/340 (80.29%), Postives = 296/340 (87.06%), Query Frame = 3
Query: 276 PDFGDSPPLLRGYSQTYIVRKQDPERDQGSNRQVMFRCGNWCYTGEVSFAGLGDGEAITLKDIPRAVPMLQRQQDRLKFFCCADRVPLDSVYRQPVEILAEAQEFVAQELASSKTSQELTKWSGVFHWIDDDSSSATYFELQAELPICMQQITLVACKTYARGLVFTTVYKEGSFYVVMQDGEGDQALLDIRFPDVSVHGQGLHLMSYDKPAQPWRKLTLWHAIKPTAA--ALEAREEGGVRGGDKLRSSAPPTTNLSSGKYMQTYIIMKPTGTETFESNNSYRDVLFRFGSWCYSGTVQLTPALALADIPHVIPALRMQQNKLDFMCDVAQVMHFFVSL 1289
P+ GD+PPLL GYSQTY+VRKQDP+RD G NRQVMFRCGNWCYTGEVSFAGLGDGE ITLKDIPRAVPMLQRQQDRLKFFCCADRVP+DSVYRQPV ILAE QEFVAQELASS+T+QELTKWSG FHWI+DDSS +TYFELQAELP CM +I LVACKTYARGLVF TVY+EGSFYVVMQ+GEGDQALLDIRFPDVS HGQGLHLMSYD +PWRKLTLWHAIKP+AA A+EA E G PPTTNL+S Y+QTY+IMKPTGTE F +NN+YRDVLFRFGSWCYSGTVQLTP LAL DIPHVIPALRMQQ+KLDFMCDVAQ+ + L
Sbjct: 44 PELGDAPPLLSGYSQTYVVRKQDPQRDHGRNRQVMFRCGNWCYTGEVSFAGLGDGEVITLKDIPRAVPMLQRQQDRLKFFCCADRVPVDSVYRQPVVILAEVQEFVAQELASSRTTQELTKWSGAFHWINDDSSCSTYFELQAELPACMDEIALVACKTYARGLVFITVYQEGSFYVVMQEGEGDQALLDIRFPDVSSHGQGLHLMSYDDLRRPWRKLTLWHAIKPSAATQAMEAAEA--AANGSSRSLGRPPTTNLTSTTYLQTYVIMKPTGTEEFGTNNAYRDVLFRFGSWCYSGTVQLTPTLALMDIPHVIPALRMQQSKLDFMCDVAQLSPILLRL 381
BLAST of mRNA_H-paniculata_contig8456.16450.1 vs. uniprot
Match: A0A836C9I4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9I4_9STRA) HSP 1 Score: 361 bits (927), Expect = 1.200e-115 Identity = 190/355 (53.52%), Postives = 229/355 (64.51%), Query Frame = 3
Query: 285 GDSPPLL-RGYSQTYIVRKQDPERDQGSNRQVMFRCGNWCYTGEVSFAGLGDGEAITLKDIPRAVPMLQRQQDRLKFFCCADRVPLDSVYRQPVEILAEAQEFVAQELASSKTSQELTKWSGVFHWIDDDSSS----------------ATYFELQAELPICMQQITLVACKTYARGLVFTTVYKEGSFYVVMQDGEGDQALLDIRFPDVSVHGQGLHLMSYDKPAQPWRKLTLWHAIKPTAAALEAREEGGVRGGDKLRSSAPPTT------NLSSGKYMQTYIIMKPT----GTETFESNNSYRDVLFRFGSWCYSGTVQLTPALALADIPHVIPALRMQQNKLDFMCDVAQV 1268
GDSPPL+ GY+QTYIVR D + + R+V+FRCGNWCY+GEVSFAGLG+G ITLKD+PRA+P+LQRQQ RL+F+CCA VP S + P++++AEAQEFVA EL + + EL KWS VF WIDD+ +TYFEL+A M + LVA KTY RGLVF TVY EGSFYVVMQDGEGDQ LLD+RFPD+S HGQGL + +Y A PW+KLTLWHA+ P A +L+S Y+QTY++M P YRDVLFRFGSWCY G +QL PAL+LADIPHVIPALR+QQ +LDF DVA V
Sbjct: 21 GDSPPLIVDGYNQTYIVRASDSDGASSTLREVLFRCGNWCYSGEVSFAGLGEG--ITLKDVPRAIPILQRQQGRLQFYCCASAVPPMSPFATPLQMMAEAQEFVAAELCGAHATAELEKWSRVFPWIDDEVGKGGGGXXXXXXXXXXGVSTYFELKAAAGDTMAGVALVASKTYTRGLVFITVYFEGSFYVVMQDGEGDQPLLDVRFPDISAHGQGLLIQTYAASAAPWQKLTLWHAVAPGGXXXXXXXXXXXXXXXXXXXPAATALGPSDMRSLASTNYIQTYVVMAPARGSXXXXXXAEARKYRDVLFRFGSWCYGGAIQLAPALSLADIPHVIPALRVQQARLDFAFDVAAV 373
BLAST of mRNA_H-paniculata_contig8456.16450.1 vs. uniprot
Match: A0A7S3HBV8_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HBV8_9STRA) HSP 1 Score: 317 bits (813), Expect = 5.320e-98 Identity = 159/324 (49.07%), Postives = 211/324 (65.12%), Query Frame = 3
Query: 309 GYSQTYIVR---KQDPERDQGSNRQVMFRCGNWCYTGEVSFAGLGDGEAITLKDIPRAVPMLQRQQDRLKFFCCADRVPLDSVYRQPVEILAEAQEFVAQELASSKTSQELTKWSGVFHWIDDDSSSATYFELQAEL-PICMQQITLVACKTYARGLVFTTVYKEGSFYVVMQDGEGDQALLDIRFPDVSVHGQGLHLMSYDKPAQPWRKLTLWHAIKPTAAALEAREEGGVRGGDKLRSSAPPTTNLSSGKYMQTYIIMKPTGTETFESNNSYRDVLFRFGSWCYSGTVQLTPALALADIPHVIPALRMQQNKLDFMCDVAQV 1268
GY+QTY++ K D E N +V FRCGNWCY G + F G+ + +++P +P+LQ+QQ L+++C A VP S Y +P++ L +A EF+AQEL S +EL K + VF WIDDD+SS TYFEL L P M +I ++A KTY RGL+ ++Y EG+ Y +MQ GEGDQALLD+RFPDVS HGQGLH+ +Y+ P+RKLTLWH + +A +E +R T N+S+ Y QTY I+K + + DVLFRFGSWCY G VQLTP+L+LADIP VIPALRMQQ++LD++CDV QV
Sbjct: 16 GYNQTYLIMANAKSDGESKTEDNHEVFFRCGNWCYKGTIQFGGV----EVNTEELPILIPLLQKQQGSLRYYCNAKSVPATSDYTEPLKFLEDASEFIAQELLSESVDKELRKMASVFPWIDDDNSS-TYFELALSLVPAYMSKIKMIASKTYTRGLILISIYNEGTIYFIMQPGEGDQALLDVRFPDVSQHGQGLHIDTYNDHTTPYRKLTLWHVLGTSATKKLPKEMPKIR-----------TINVSTKNYQQTYCILKSAWDNNSPTLTVHHDVLFRFGSWCYCGRVQLTPSLSLADIPFVIPALRMQQSRLDYLCDVNQV 323
BLAST of mRNA_H-paniculata_contig8456.16450.1 vs. uniprot
Match: F0Y4X5_AURAN (Rad51 domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y4X5_AURAN) HSP 1 Score: 318 bits (814), Expect = 6.550e-96 Identity = 164/336 (48.81%), Postives = 221/336 (65.77%), Query Frame = 3
Query: 300 LLRG-YSQTYIVRKQDPERDQGSN-------------RQVMFRCGNWCYTGEVSFAGLGDGEAITLKDIPRAVPMLQRQQDRLKFFCCADRVPLDSVYRQPVEILAEAQEFVAQELASSKTSQELTKWSGVFHWIDDDSSSATYFELQAELPICMQQITLVACKTYARGLVFTTVYKEGSFYVVMQDGEGDQALLDIRFPDVSVHGQGLHLMSYDKPAQPWRKLTLWHAIKPTAAALEAREEGGVRGGDKLRSSAPPTTNLSSGKYMQTYIIMKPTGTETFES-NNSYRDVLFRFGSWCYSGTVQLTPALALADIPHVIPALRMQQNKLDFMCDVA 1262
+L G Y+QTY++R D + R+V+FRCGNWCYTG V+ D + L D+PR +P LQRQQ+RL F+C A VP +S +++P+ + +A EF A ELAS++ +EL KW+ ++ W++ D+++ TYFELQ P CM I L A KTYARGLVF TVY E +FYVV+QDGEGDQ LLD++FPDVS GQG+H+ +Y + W KL LWH++ A E R + +P TTNL++ Y+Q Y ++K T + NN++ DVLFRFGSWCYSG+VQLTP L LAD+PH+IPALRMQQ++LDFMCDV+
Sbjct: 15 VLEGTYNQTYLIRTVDKGGSEAKGXXXXXXXXXXYQERRVLFRCGNWCYTGNVTL----DKAKVLLSDLPRIIPTLQRQQNRLHFYCNASNVPSESSFKEPMGFVGDASEFAAAELASARVHEELRKWTDIYTWMETDAAN-TYFELQCAPPPCMDGIALAASKTYARGLVFITVYFEKAFYVVVQDGEGDQPLLDVKFPDVSQPGQGIHVANYAGD-RTWLKLALWHSL--------AAENAPTRS-SPTPAQSPKTTNLATDSYIQMYTVLKATEERGAAARNNAHHDVLFRFGSWCYSGSVQLTPMLDLADLPHLIPALRMQQSRLDFMCDVS 335
BLAST of mRNA_H-paniculata_contig8456.16450.1 vs. uniprot
Match: A0A8J2S959_9STRA (Hypothetical protein n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S959_9STRA) HSP 1 Score: 315 bits (807), Expect = 1.290e-94 Identity = 162/343 (47.23%), Postives = 225/343 (65.60%), Query Frame = 3
Query: 300 LLRG-YSQTYIVRKQDP------------ERDQGSN-----RQVMFRCGNWCYTGEVSFAGLGDGEAITLKDIPRAVPMLQRQQDRLKFFCCADRVPLDSVYRQPVEILAEAQEFVAQELASSKTSQELTKWSGVFHWIDDDSSSATYFELQAELPICMQQITLVACKTYARGLVFTTVYKEGSFYVVMQDGEGDQALLDIRFPDVSVHGQGLHLMSYDKPAQPWRKLTLWHAIKPTAAALEAREEGGVRGGDKLRSSAPPTTNLSSGKYMQTYIIMKPTGTETFES--NNSYRDVLFRFGSWCYSGTVQLTPALALADIPHVIPALRMQQNKLDFMCDVAQV 1268
+L G Y+QTY++R D + D G + R+VMFRCGNWCYTG ++ + + L D+PR +P LQRQQ+RL F+C A VP +S +++P+ + EA EF A+ELAS EL KW+ V+ W+++D ++ TYFE+Q P CM I L A KTYARGLVF VY + + YVV+QDGEGDQ LLD++FPDVS GQG+H+ +Y + W KL LWH++ A +R+ G R + P TTNL++ Y+Q Y ++K + E +S + ++ DVLFRFGSWCY+G+VQLTP L LAD+PH+IPALRMQQ++LDF+CDV+Q+
Sbjct: 85 ILAGTYNQTYLIRTPDAGEDAREAKGLSDDSDDGDSDSYVERRVMFRCGNWCYTGNITL----EKSRVLLSDLPRVIPTLQRQQNRLHFYCNASSVPSESSFKEPMAFVNEAAEFAARELASDTVHDELRKWTDVYGWMENDQAN-TYFEIQCCPPPCMDGIALAASKTYARGLVFIAVYFDRALYVVVQDGEGDQPLLDVKFPDVSCPGQGIHVATYGGEQRTWLKLALWHSL----AQDPSRQVDGPRRSSPQKQ--PKTTNLTTDSYVQMYTVLKASKDEKVQSVGSTAHHDVLFRFGSWCYAGSVQLTPLLDLADLPHLIPALRMQQSRLDFICDVSQM 416
BLAST of mRNA_H-paniculata_contig8456.16450.1 vs. uniprot
Match: A0A7S4D7F3_HETAK (Hypothetical protein (Fragment) n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D7F3_HETAK) HSP 1 Score: 302 bits (774), Expect = 3.450e-92 Identity = 173/354 (48.87%), Postives = 216/354 (61.02%), Query Frame = 3
Query: 276 PDFGDSPPLLRGYSQTYIVRKQ----DPERDQGS----NRQVMFRCGNWCYTGEVSFAGLGDGEAITLKDIPRAVPMLQRQQDRLKFFCCADRVPLDSVYRQPVEILAEAQEFVAQELASSKTSQELTKWSGVFHWIDDDSSSATYFEL--QAELPIC--MQQITLVACKTYARGLVFTTVYKEGSFYVVMQDGEGDQALLDIRFPDVSVHGQGLHLMSYDKP----------AQPWRKLTLWHAIKPTAAALEAREEGGVRGGDKLRSSAPPTTNLSSGKYMQTYIIMK-PTGTETFESNNSYRDVLFRFGSWCYSGTVQLTPALALADIPHVIPALRMQQNKLDFMCDVAQV 1268
PD D L Y+QTY++ K E G+ NR+V FRCGNWCY GE+SF + I L D+PR +P+LQRQQ +L ++C DRVP S + +P+++ A+EF+A EL S K S EL KWS VF WID DS S TYFEL QA P C M + +VA KTY RGLV TV+ EG+FYVV+Q GEGDQ LLD+RFPDVS HGQGLH+ +Y +PW KLTLWHA AL + +R L +LSS Y+Q+Y++M P G + R LFRFGSWCYSG V LTP + L DIPHVIPALR+QQN+L +MCDV ++
Sbjct: 67 PDASDERLLAGAYNQTYVIFKTKGGASAEAKSGATPNYNRRVFFRCGNWCYAGELSFGV----DQIGLADLPRIIPLLQRQQGKLAYYCTFDRVPAASEFHRPLQLHWAAEEFLANELVSDKVSAELEKWSKVFAWIDGDSES-TYFELGCQAGHPACAAMADVAVVASKTYCRGLVLITVWHEGAFYVVVQPGEGDQPLLDVRFPDVSRHGQGLHVHTYTPTWPTSTGAAGAGRPWAKLTLWHAPSLGMPALVPQ----IRDKQLL--------DLSSDAYLQSYVVMAAPPGAA---QPATQRQALFRFGSWCYSGEVTLTPTITLKDIPHVIPALRLQQNRLSYMCDVTKM 400
BLAST of mRNA_H-paniculata_contig8456.16450.1 vs. uniprot
Match: A0A6U1P8Q3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1P8Q3_9STRA) HSP 1 Score: 295 bits (755), Expect = 1.620e-90 Identity = 155/310 (50.00%), Postives = 207/310 (66.77%), Query Frame = 3
Query: 369 RQVMFRCGNWCYTGEVSFAGLGDGEAITLKDIPRAVPMLQRQQDRLKFFCCADRVPLDSVYRQPVEILAEAQEFVAQELASSKTSQELTKWSGVFHWIDDDSSSATYFELQAELP--ICMQQITLVACKTYARGLVFTTVYKEGSFYVVMQDGEGDQALLDIRFPDVSVHGQGLHLMSYDKPAQPWRKLTLWHAIKPTAAALEAREEGGVRGGDKLRSSAPPTTNLSSGKYMQTYIIMKPT--------GTETFESNNSYRDVLFRFGSWCYSGTVQLTPALALADIPHVIPALRMQQNKLDFMCDVAQV 1268
R+V FRCGNWCY G++SF + + L D+PR +P+LQRQQ +L ++C A VP S + Q + A+ FVA +LAS +T EL KW ++ WI+DD++S TYFEL++ LP +Q ++L+A KTY+RGLV +Y E SFY V+Q GEGDQ LLD+RFPDVS HGQGL + +Y +P +RKLTLWHA+ AL + +R DK TNLSS Y+QTY++M+P+ G+ + N S+ LFRFGSWCYSG VQLTP L+L DIPHVIPALRMQQ +L+F+CDV ++
Sbjct: 32 RKVFFRCGNWCYAGQLSFGV----DEVGLSDLPRVIPLLQRQQSKLSYYCTASSVPPQSEFHQALHHHWGAETFVADQLASDETMAELAKWGKIYTWINDDAAS-TYFELESALPRGASLQDVSLIASKTYSRGLVLIGIYHENSFYFVLQAGEGDQPLLDVRFPDVSRHGQGLTVGNYPQPEFNYRKLTLWHAVTLGMPALVPQ----IR--DKQ------LTNLSSDNYLQTYVVMRPSALGLTSSAGSTSVPGNTSHA-ALFRFGSWCYSGHVQLTPVLSLKDIPHVIPALRMQQGRLEFLCDVTKM 323
BLAST of mRNA_H-paniculata_contig8456.16450.1 vs. uniprot
Match: A0A7S3NQS8_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NQS8_9STRA) HSP 1 Score: 280 bits (716), Expect = 6.830e-84 Identity = 156/347 (44.96%), Postives = 211/347 (60.81%), Query Frame = 3
Query: 273 TPDFGDSPP--LLRG-YSQTYIVRKQDP------ERDQGSN----RQVMFRCGNWCYTGEVSFAGLGDGEAITLKDIPRAVPMLQRQQDRLKFFCCADRVPLDSVYRQPVEILAEAQEFVAQELASSKTSQELTKWSGVFHWIDDDSSSATYFELQA-ELPICMQQITLVACKTYARGLVFTTVYKEGSFYVVMQDGEGDQALLDIRFPDVSVHGQGLHLMSYDKPAQPWRKLTLWHAIKPTAAALEAREEGGVRGGDKLRSSAPPTTNLSSGKYMQTYIIMKPTGTETFESN-NSYRDVLFRFGSWCYSGTVQLTPALALADIPHVIPALRMQQNKLDFMCDVAQV 1268
+P G +P +L+G Y+QTYI+ K+D + D G N R+VMFRCGNWCYTG ++ D +TL D+P+A+P LQ+QQ+RL ++C A VP +S + + + EF A+EL E+ + + WI+DD+ + TYFELQA ++P M Q+ L A KTY RGL+F T Y E FY V+ DGEGDQ LLD++FPDVS G G+HL Y + KLTLWH++ T ++ + TTNLSS Y+Q YII++ E + + DVLFRFGSWCYSG+VQLTP L L +PH+IPALRMQQ +LDF+CDV Q+
Sbjct: 6 SPKMGSAPSDSILKGAYNQTYIICKRDTMEEENSKEDSGDNDYQERRVMFRCGNWCYTGNITL----DASILTLGDLPKAIPALQKQQNRLHYYCNASSVPRESPFYDCLSYINAGTEFFARELGCDDILAEVARRAKEDTWIEDDAKN-TYFELQANQVPKYMHQVALAASKTYCRGLIFITAYFESRFYAVICDGEGDQPLLDVKFPDVSRPGGGVHLRDY---YDDYTKLTLWHSLTHTIVTDSKETVSSLQ--KQTEKKKKRTTNLSSQSYVQMYIILRAIADEPDKPPITPHHDVLFRFGSWCYSGSVQLTPELDLGSVPHIIPALRMQQARLDFLCDVNQM 342
BLAST of mRNA_H-paniculata_contig8456.16450.1 vs. uniprot
Match: A0A7S2D1T8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D1T8_9STRA) HSP 1 Score: 263 bits (672), Expect = 8.110e-78 Identity = 147/352 (41.76%), Postives = 210/352 (59.66%), Query Frame = 3
Query: 267 GNTPDFGDSPP--LLRGYSQTYIVRKQ------DPERDQGSN------RQVMFRCGNWCYTGEVSFAGLGDGEAITLKDIPRAVPMLQRQQDRLKFFCCADRVPLDSVYRQPVEILAEAQEFVAQELASSKTSQELTKWSGVFHWIDDDSSSATYFELQAELPICMQQITLVACKTYARGLVFTTVYKEGSFYVVMQDGEGDQALLDIRFPDVSVHGQGLHLMSYDKPAQPW-RKLTLWHAIKPTAAALEAREEGGVRGGDKLRSSAPPTTNLSSGKYMQTYIIMKPT-GTETFESNNSYRDVLFRFGSWCYSGTVQLT-PALALADIPHVIPALRMQQNKLDFMCDVAQVM 1271
G P+ D PP +L+GY+QTY++R D D G + +V+FRCGNWCYTG V +L +IP +P+LQRQQ RL ++C ADR+P S + QPV + EA E+ A+ LAS ++ + WI+DD+ T+FE+QA++ M+ I LVA KTY RGL+F T+Y EGSFY+ + +G GDQ LLD++FP+VS HG+G+ L + + W +LTLWH++ LR PPT +LSS Y+Q Y +MK E ++YR+VLFRFGSWCY G++QL ++++ ++PHVIPALRMQQ +L+F+ QV+
Sbjct: 23 GAKPEDTDVPPERVLQGYNQTYLIRSAAGARATDEFEDGGKSAEDLAEHEVLFRCGNWCYTGHVVL-----NRGFSLSEIPLVIPLLQRQQSRLHYYCNADRIPAQSSFHQPVSNVYEASEYCARTLASDGILDQMAALASEHRWIEDDAEK-TFFEIQADIA-GMEGIELVASKTYTRGLIFITIYFEGSFYISISEGAGDQPLLDVKFPNVSHHGEGIKLRTPVETMPAWFLRLTLWHSMP-----------------SDLRVLPPPTRDLSSTSYIQMYFVMKSRIENGGMEEPSAYREVLFRFGSWCYGGSIQLKIGSVSIEELPHVIPALRMQQQRLEFVYAADQVL 350
BLAST of mRNA_H-paniculata_contig8456.16450.1 vs. uniprot
Match: A0A024UMR4_9STRA (Uncharacterized protein n=13 Tax=Aphanomyces TaxID=100860 RepID=A0A024UMR4_9STRA) HSP 1 Score: 246 bits (627), Expect = 7.830e-72 Identity = 139/333 (41.74%), Postives = 193/333 (57.96%), Query Frame = 3
Query: 300 LLRGYSQTYIVRKQDPERDQGSNRQVMFRCGNWCYTGEVSFAGLGDGEAITLKDIPRAVPMLQRQQDRLKFFCCADRVPLDSVYRQPVEILAEAQEFVAQELASSKTSQELTKWSGVFHWIDDDSSS--ATYFELQAELPICMQQITLVACKTYARGLVFTTVYKEGSFYVVMQDGEGDQALLDIRFPDVSVHGQGLHLMSYDKPAQPWRKLTLWHAIKPTAAALEAREEGGVRGGDKLRSSAPPTT------NLSSGKYMQTYIIMKPTGTETFESN--NSYRDVLFRFGSWCYSGTVQLTPALALADIPHVIPALRMQQNKLDFMCDVAQV 1268
L GY+QTY+++ +V+FRCGNWCYTG+V LGD E ITL D+P +P LQ+QQ L+F C ++P S Y P+E L +A +F+ ELAS ++L K + W+DDD ++ +FEL+ C I LVA KT+ RGLV +Y SFYVV+Q+G+G+Q LLD+RFPD+S H QG+HL Y + +KL LW A+ L S +PP + ++S Y QT++I + T+ E + + R+VLFRFGSWCY+G V L P L L+DIP VIP LR QQ+ L FMC+V ++
Sbjct: 50 LREGYNQTYVIQSSSTHL-----HEVLFRCGNWCYTGKVD---LGDSE-ITLSDLPLVIPALQKQQGSLQFLCEWKQIPSTSPYAVPMETLYDAFDFIGTELASKSIEKKLMKAAQENAWVDDDGATDGKNFFELETGGFDCFDGIDLVASKTFVRGLVLLVIYYRRSFYVVLQEGDGEQPLLDVRFPDLSQHLQGVHLRHYQENFMNMKKLVLWQAMPAD-----------------LASKSPPKSFQMQVKDVSGSGYNQTFLIQR---TQPLEGHPESKLREVLFRFGSWCYNGHVDLGPKLELSDIPIVIPMLRRQQSALTFMCEVTKM 353 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8456.16450.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig8456.16450.1 >prot_H-paniculata_contig8456.16450.1 ID=prot_H-paniculata_contig8456.16450.1|Name=mRNA_H-paniculata_contig8456.16450.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=387bp MSDDGDASLGVSDGDLSSTDLSEGDRGAKDSDANIQNNDDDDDHGNTPDFback to top mRNA from alignment at H-paniculata_contig8456:743..5174- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig8456.16450.1 ID=mRNA_H-paniculata_contig8456.16450.1|Name=mRNA_H-paniculata_contig8456.16450.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4432bp|location=Sequence derived from alignment at H-paniculata_contig8456:743..5174- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig8456:743..5174- >mRNA_H-paniculata_contig8456.16450.1 ID=mRNA_H-paniculata_contig8456.16450.1|Name=mRNA_H-paniculata_contig8456.16450.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2322bp|location=Sequence derived from alignment at H-paniculata_contig8456:743..5174- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |