mRNA_H-paniculata_contig8451.16449.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig8451.16449.1
Unique NamemRNA_H-paniculata_contig8451.16449.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig8451.16449.1 vs. uniprot
Match: A0A2D2AH28_9PHAE (Prolycopene isomerase-like1 n=2 Tax=Scytosiphonaceae TaxID=2891 RepID=A0A2D2AH28_9PHAE)

HSP 1 Score: 420 bits (1080), Expect = 5.250e-144
Identity = 200/225 (88.89%), Postives = 214/225 (95.11%), Query Frame = 1 
Query:    1 LIPEGAVDPKYIEESMDTPDTGSFMHLHLGIDAAGLDDLDIHYSVVESWVESIDAPMNMFIVSIPTVLDPGLAPEGKHLVHIYTAGNEPYALWEGLKRGSPEYEALKKKRAEGMWKALEKIIPDVRERTEVELVASPLTHEFWNRRFRGSYGPGWRAGEAEFPGCVTPLKGLLHCGDSTLPGLGLPAVAASGMNAASTLTPVWKQLRLLWDMQDKGLIDSKFSDF 675
            LIPEGAVDPKYIE+SMDTPDTGSFMHLHLGID  GLDDLDIHYSVVESW   IDAP NMFIVSIPTVLDP LAPEGKHLVHIYTAGNEPY LWEG+KRGSPEYEALKK+RAEGMWKALE+IIPDVR+RTEVELVA+PLTHEF+NRRF+GSYGPGWRAGEAEFPGCVTPLK LLHCGDSTLPGLGLPAVAASGM+AAST+TPVWKQL LLWDMQ +G+I+SKF+DF
Sbjct:  279 LIPEGAVDPKYIEDSMDTPDTGSFMHLHLGIDGKGLDDLDIHYSVVESWSVPIDAPQNMFIVSIPTVLDPSLAPEGKHLVHIYTAGNEPYKLWEGMKRGSPEYEALKKERAEGMWKALERIIPDVRKRTEVELVATPLTHEFFNRRFKGSYGPGWRAGEAEFPGCVTPLKSLLHCGDSTLPGLGLPAVAASGMSAASTITPVWKQLGLLWDMQRRGMIESKFNDF 503
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BLAST of mRNA_H-paniculata_contig8451.16449.1 vs. uniprot
Match: A0A2D2AH38_9PHAE (Prolycopene isomerase-like1 n=1 Tax=Sargassum integerrimum TaxID=1159339 RepID=A0A2D2AH38_9PHAE)

HSP 1 Score: 405 bits (1042), Expect = 3.020e-138
Identity = 192/225 (85.33%), Postives = 210/225 (93.33%), Query Frame = 1 
Query:    1 LIPEGAVDPKYIEESMDTPDTGSFMHLHLGIDAAGLDDLDIHYSVVESWVESIDAPMNMFIVSIPTVLDPGLAPEGKHLVHIYTAGNEPYALWEGLKRGSPEYEALKKKRAEGMWKALEKIIPDVRERTEVELVASPLTHEFWNRRFRGSYGPGWRAGEAEFPGCVTPLKGLLHCGDSTLPGLGLPAVAASGMNAASTLTPVWKQLRLLWDMQDKGLIDSKFSDF 675
            LIP+GAVD KYIE+S +TPDTGSFMHLHLGIDA GLDDLDIHYSVV+SW   IDAP NMF+VSIPTVLDP LAPEGKHLVHIYTAGNEPY LW+G+KRG PEYE LKK+RAE MWKALEKIIPDVR RTEVELVA+PLTHEF+NRRFRGSYGPGWRAG+AEFPGC+TPLKGLLHCGDSTLPG+GLPAVAASGMNAASTLTPVWKQL LLWDM+ +G++DSKF+DF
Sbjct:  279 LIPKGAVDAKYIEDSDETPDTGSFMHLHLGIDARGLDDLDIHYSVVDSWSIPIDAPQNMFVVSIPTVLDPSLAPEGKHLVHIYTAGNEPYDLWQGVKRGCPEYEKLKKERAECMWKALEKIIPDVRRRTEVELVATPLTHEFFNRRFRGSYGPGWRAGQAEFPGCITPLKGLLHCGDSTLPGIGLPAVAASGMNAASTLTPVWKQLGLLWDMKRRGMVDSKFNDF 503
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BLAST of mRNA_H-paniculata_contig8451.16449.1 vs. uniprot
Match: A0A835Z9G8_9STRA (Amine oxidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9G8_9STRA)

HSP 1 Score: 313 bits (801), Expect = 2.110e-101
Identity = 149/216 (68.98%), Postives = 176/216 (81.48%), Query Frame = 1 
Query:   31 YIEESMDTPDTGSFMHLHLGIDAAGLDDL--DIHYSVVESWVESIDAPMNMFIVSIPTVLDPGLAPEGKHLVHIYTAGNEPYALWEGLKRGSPEYEALKKKRAEGMWKALEKIIPDVRERTEVELVASPLTHEFWNRRFRGSYGPGWRAGEAEFPGCVTPLKGLLHCGDSTLPGLGLPAVAASGMNAASTLTPVWKQLRLLWDMQDKGLIDSKFSD 672
            ++E S  TPDT SF HLHLGIDAAGL++L  +IHY+V+ +W E IDAP+NM IVSIPTVLDPGLAP GKH VH Y AGNEPY+LWEGL+RGS EYE LK++R + +W ALE+IIPD+R R EV L ASPLTHE +NRR RGSYGPGWRAGE  FPGC TP+K LL CGDSTLPGLG+PAVAASGM+AA+TL PVW+ L+ + +MQ KG I  +F D
Sbjct:  319 FVEASQATPDTASFNHLHLGIDAAGLEELKLNIHYTVINTWDEPIDAPLNMVIVSIPTVLDPGLAPPGKHAVHAYMAGNEPYSLWEGLQRGSKEYEELKEQRTQVLWNALERIIPDIRARAEVTLPASPLTHEMFNRRHRGSYGPGWRAGEGTFPGCTTPIKDLLRCGDSTLPGLGVPAVAASGMHAANTLVPVWQHLKFVKEMQSKGFIVDRFKD 534
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BLAST of mRNA_H-paniculata_contig8451.16449.1 vs. uniprot
Match: A0A6H5K504_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K504_9PHAE)

HSP 1 Score: 266 bits (680), Expect = 2.310e-87
Identity = 131/149 (87.92%), Postives = 137/149 (91.95%), Query Frame = 1 
Query:    1 LIPEGAVDPKYIEESMDTPDTGSFMHLHLGIDAAGLDDLDIHYSVVESWVESIDAPMNMFIVSIPTVLDPGLAPEGKHLVHIYTAGNEPYALWEGLKRGSPEYEALKKKRAEGMWKALEKIIPDVRERTEVELVASPLTHEFWNRRFRG 447
            LIPEGAVDPKYIE+SM TPDTGSFMHLHLGIDA GL DLDIHYSVVESW   IDAP NMFIVSIPTVLD  LAPEGKHLVHIYTAGNEPY LWEG+KRGSPEYEALKK+RAE MWKALEKIIPDVR RTEVELVA+PLTHEF+NRRF+G
Sbjct:   60 LIPEGAVDPKYIEDSMYTPDTGSFMHLHLGIDAEGLHDLDIHYSVVESWTVPIDAPQNMFIVSIPTVLDKSLAPEGKHLVHIYTAGNEPYKLWEGMKRGSPEYEALKKERAECMWKALEKIIPDVRRRTEVELVATPLTHEFFNRRFKG 208
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BLAST of mRNA_H-paniculata_contig8451.16449.1 vs. uniprot
Match: D7FUQ4_ECTSI (Carotenoid isomerase-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUQ4_ECTSI)

HSP 1 Score: 271 bits (693), Expect = 2.070e-86
Identity = 132/149 (88.59%), Postives = 139/149 (93.29%), Query Frame = 1 
Query:    1 LIPEGAVDPKYIEESMDTPDTGSFMHLHLGIDAAGLDDLDIHYSVVESWVESIDAPMNMFIVSIPTVLDPGLAPEGKHLVHIYTAGNEPYALWEGLKRGSPEYEALKKKRAEGMWKALEKIIPDVRERTEVELVASPLTHEFWNRRFRG 447
            LIPEGAVDPKYIE+SMDTPDTGSFMHLHLGIDA GLDDLDIHYSVVESW   IDAP NMFIVSIPTVLD  LAP+GKHLVHIYTAGNEPY LWEG+KRGSPEYEALKK+RAE MWKALEKIIPDVR RTEVELVA+PLTHEF+NRRF+G
Sbjct:  272 LIPEGAVDPKYIEDSMDTPDTGSFMHLHLGIDAEGLDDLDIHYSVVESWTVPIDAPQNMFIVSIPTVLDKSLAPDGKHLVHIYTAGNEPYKLWEGMKRGSPEYEALKKERAECMWKALEKIIPDVRRRTEVELVATPLTHEFFNRRFKG 420
[Close]
BLAST of mRNA_H-paniculata_contig8451.16449.1 vs. uniprot
Match: A0A832M237_9CYAN (Carotene isomerase n=1 Tax=Oscillatoriales cyanobacterium SpSt-402 TaxID=2282168 RepID=A0A832M237_9CYAN)

HSP 1 Score: 260 bits (664), Expect = 5.040e-83
Identity = 127/216 (58.80%), Postives = 160/216 (74.07%), Query Frame = 1 
Query:    1 LIPEGAVDPKYIEESMDTPDTGSFMHLHLGIDAAGL-DDLDIHYSVVESWVESIDAPMNMFIVSIPTVLDPGLAPEGKHLVHIYTAGNEPYALWEGLKRGSPEYEALKKKRAEGMWKALEKIIPDVRERTEVELVASPLTHEFWNRRFRGSYGPGWRAGEAEFPGCVTPLKGLLHCGDSTLPGLGLPAVAASGMNAASTLTPVWKQLRLLWDMQDK 645
            L+P+G +   ++ E   TP+  SFMHLHLGIDA GL  DL+ HY VV  W + + AP N+ ++SIP+VLDP LAP GKH++H+YT GNEPY LW+GL R S  Y  LK++RA  MW+ALE++IPDVR R E+ LV +PLTHE + RR RGSYGP  RAGE+ FPG  TPL GLL CGDST PG+GLPAVAASGM AA+TL PV + L +L D+ ++
Sbjct:  140 LLPDGVLPKNFLLERQATPECDSFMHLHLGIDATGLPSDLECHYIVVNDWEQGVTAPQNLVLISIPSVLDPSLAPTGKHVIHVYTPGNEPYHLWQGLDRRSERYTQLKQERAAVMWQALERVIPDVRSRCEITLVGTPLTHERFLRRHRGSYGPALRAGESLFPGAKTPLPGLLLCGDSTFPGIGLPAVAASGMIAANTLAPVSQHLAMLKDLVNR 355
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BLAST of mRNA_H-paniculata_contig8451.16449.1 vs. uniprot
Match: A0A0F5Y7B6_9CYAN (Carotene isomerase n=3 Tax=Oscillatoriales TaxID=1150 RepID=A0A0F5Y7B6_9CYAN)

HSP 1 Score: 263 bits (671), Expect = 4.690e-82
Identity = 130/210 (61.90%), Postives = 157/210 (74.76%), Query Frame = 1 
Query:    1 LIPEGAVDPKYIEESMDTPDTGSFMHLHLGIDAAGL-DDLDIHYSVVESWVESIDAPMNMFIVSIPTVLDPGLAPEGKHLVHIYTAGNEPYALWEGLKRGSPEYEALKKKRAEGMWKALEKIIPDVRERTEVELVASPLTHEFWNRRFRGSYGPGWRAGEAEFPGCVTPLKGLLHCGDSTLPGLGLPAVAASGMNAASTLTPVWKQLRLL 627
            LIP GA+  ++++    TPD  SFMHLHLGID  GL +DL  HY  V  W + I +P+N+ ++SIPTVLDP LAP GKH++H+YT GNEPY LW+GL R SPEY  LK +RAE MW+ALE++IPDVR R EV LV +PLTHE + RR+RGSYGP   AG+  FPG  TPL GLL CGDST PG+GLPAVAASGM AA+TLT V K L +L
Sbjct:  306 LIPLGALPQEFVKARSQTPDCESFMHLHLGIDGTGLPEDLACHYITVNDWEKGITSPLNLIVMSIPTVLDPSLAPPGKHVIHVYTPGNEPYDLWQGLDRRSPEYAQLKAERAEPMWQALERVIPDVRSRCEVTLVGTPLTHERFLRRYRGSYGPAIPAGQGTFPGSQTPLAGLLCCGDSTFPGIGLPAVAASGMIAANTLTSVQKHLEML 515
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BLAST of mRNA_H-paniculata_contig8451.16449.1 vs. uniprot
Match: A0A1U7IJ27_9CYAN (Carotene isomerase n=2 Tax=Phormidium TaxID=1198 RepID=A0A1U7IJ27_9CYAN)

HSP 1 Score: 260 bits (664), Expect = 3.950e-81
Identity = 127/210 (60.48%), Postives = 159/210 (75.71%), Query Frame = 1 
Query:    1 LIPEGAVDPKYIEESMDTPDTGSFMHLHLGIDAAGL-DDLDIHYSVVESWVESIDAPMNMFIVSIPTVLDPGLAPEGKHLVHIYTAGNEPYALWEGLKRGSPEYEALKKKRAEGMWKALEKIIPDVRERTEVELVASPLTHEFWNRRFRGSYGPGWRAGEAEFPGCVTPLKGLLHCGDSTLPGLGLPAVAASGMNAASTLTPVWKQLRLL 627
            LIPEGAV  +YI++   TP+  SFMHLHLGIDA GL  DL IHY VV  W   I AP N+ ++SIP+VLDP LAP GKH++H+YT GNEP++LW+G++R S EY  LK++RAE MW+AL++IIPD+ +RT+V LV +PLTH  + RR  GSYGP   AG+  FPG  TPL GL  CGDST PG+GLPAVAASGM AA+T+ PV + L+LL
Sbjct:  298 LIPEGAVPKRYIKQQQTTPECDSFMHLHLGIDATGLRKDLGIHYIVVNDWDRGITAPQNLVLISIPSVLDPSLAPPGKHVIHVYTPGNEPFSLWQGMERNSEEYTLLKQQRAEVMWQALKRIIPDICDRTKVNLVGTPLTHARFLRRHHGSYGPAIMAGKDLFPGATTPLSGLFCCGDSTFPGIGLPAVAASGMMAANTIAPVQQHLQLL 507
[Close]
BLAST of mRNA_H-paniculata_contig8451.16449.1 vs. uniprot
Match: A0A1Z4UWP7_9CYAN (Amine oxidase n=4 Tax=Sphaerospermopsis TaxID=752201 RepID=A0A1Z4UWP7_9CYAN)

HSP 1 Score: 259 bits (663), Expect = 5.570e-81
Identity = 127/213 (59.62%), Postives = 161/213 (75.59%), Query Frame = 1 
Query:    1 LIPEGAVDPKYIEESMDTPDTGSFMHLHLGIDAAGL-DDLDIHYSVVESWVESIDAPMNMFIVSIPTVLDPGLAPEGKHLVHIYTAGNEPYALWEGLKRGSPEYEALKKKRAEGMWKALEKIIPDVRERTEVELVASPLTHEFWNRRFRGSYGPGWRAGEAEFPGCVTPLKGLLHCGDSTLPGLGLPAVAASGMNAASTLTPVWKQLRLLWDM 636
            LIP GA+   Y+E+   TP+  SFMHLHLGIDA GL ++L IHY VV  W + + AP N+ ++SIP+VLD  LAP GKH++H+YT GNEPY +W+GL+R S EY+ LK++RAE MW+ALE+IIPD+R R E+ LV +PLTH  + RR  GSYGPG  AG+  FPG  TPL GLL CGDST PG+GLPAVAASGM AA+T+ PV + L+LL D+
Sbjct:  298 LIPPGALPKWYVEKQEKTPECDSFMHLHLGIDATGLSENLGIHYIVVNDWQKGVTAPQNVVLISIPSVLDSSLAPPGKHVIHVYTPGNEPYKIWQGLERNSKEYKLLKQERAEVMWQALERIIPDIRSRCEISLVGTPLTHGRFLRRHHGSYGPGIVAGKGLFPGATTPLSGLLCCGDSTFPGIGLPAVAASGMMAANTIVPVQQHLQLLNDI 510
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BLAST of mRNA_H-paniculata_contig8451.16449.1 vs. uniprot
Match: UPI0016846C4C (NAD(P)/FAD-dependent oxidoreductase n=1 Tax=Richelia sinica TaxID=1357545 RepID=UPI0016846C4C)

HSP 1 Score: 259 bits (661), Expect = 1.140e-80
Identity = 126/210 (60.00%), Postives = 158/210 (75.24%), Query Frame = 1 
Query:    1 LIPEGAVDPKYIEESMDTPDTGSFMHLHLGIDAAGLD-DLDIHYSVVESWVESIDAPMNMFIVSIPTVLDPGLAPEGKHLVHIYTAGNEPYALWEGLKRGSPEYEALKKKRAEGMWKALEKIIPDVRERTEVELVASPLTHEFWNRRFRGSYGPGWRAGEAEFPGCVTPLKGLLHCGDSTLPGLGLPAVAASGMNAASTLTPVWKQLRLL 627
            LIP GAV   Y+++   TP+  SFMHLHLGIDAA L  +L IHY VV  W + + AP N+ ++SIP+VLDP LAP GKH++H+YT GNEP+A+W+G++R SPEY  LK++R E MW+ALE+IIPD+R R EV LV +PLTH  + RR  GSYGP   AG+  FPG  TPL GLL CGDST PG+GLPAVAASGM AA+T+ PV + L+LL
Sbjct:  298 LIPPGAVPKFYLQKQQATPECDSFMHLHLGIDAAALPKNLGIHYIVVNDWHQGVTAPQNVVLISIPSVLDPSLAPAGKHVIHVYTPGNEPFAIWQGIERNSPEYALLKQERGEVMWQALERIIPDIRSRCEVTLVGTPLTHSRFLRRHHGSYGPAIAAGQGLFPGATTPLSGLLCCGDSTFPGIGLPAVAASGMIAANTIAPVNQHLKLL 507
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8451.16449.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2D2AH28_9PHAE5.250e-14488.89Prolycopene isomerase-like1 n=2 Tax=Scytosiphonace... [more]
A0A2D2AH38_9PHAE3.020e-13885.33Prolycopene isomerase-like1 n=1 Tax=Sargassum inte... [more]
A0A835Z9G8_9STRA2.110e-10168.98Amine oxidase n=1 Tax=Tribonema minus TaxID=303371... [more]
A0A6H5K504_9PHAE2.310e-8787.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FUQ4_ECTSI2.070e-8688.59Carotenoid isomerase-like protein n=1 Tax=Ectocarp... [more]
A0A832M237_9CYAN5.040e-8358.80Carotene isomerase n=1 Tax=Oscillatoriales cyanoba... [more]
A0A0F5Y7B6_9CYAN4.690e-8261.90Carotene isomerase n=3 Tax=Oscillatoriales TaxID=1... [more]
A0A1U7IJ27_9CYAN3.950e-8160.48Carotene isomerase n=2 Tax=Phormidium TaxID=1198 R... [more]
A0A1Z4UWP7_9CYAN5.570e-8159.62Amine oxidase n=4 Tax=Sphaerospermopsis TaxID=7522... [more]
UPI0016846C4C1.140e-8060.00NAD(P)/FAD-dependent oxidoreductase n=1 Tax=Richel... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8451contigH-paniculata_contig8451:468..7401 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score273.5
Seed ortholog evalue9e-71
Seed eggNOG ortholog2880.D7FUQ4
Hectar predicted targeting categoryother localisation
EggNOG free text desc.all-trans-retinol 13,14-reductase activity
EggNOG OGsCOG1233@1,KOG4254@2759
Ec32 ortholog descriptioncarotenoid isomerase-like protein
Ec32 orthologEc-03_001460.2
COG Functional cat.Q
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons5
Model size678
Cds size678
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8451.16449.1prot_H-paniculata_contig8451.16449.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig8451 468..7401 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931061.8361363-CDS-H-paniculata_contig8451:467..5991622931061.8361363-CDS-H-paniculata_contig8451:467..599Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8451 468..599 +
1691481572.3981357-CDS-H-paniculata_contig8451:467..5991691481572.3981357-CDS-H-paniculata_contig8451:467..599Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8451 468..599 +
1622931061.8564045-CDS-H-paniculata_contig8451:2051..22311622931061.8564045-CDS-H-paniculata_contig8451:2051..2231Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8451 2052..2231 +
1691481572.414003-CDS-H-paniculata_contig8451:2051..22311691481572.414003-CDS-H-paniculata_contig8451:2051..2231Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8451 2052..2231 +
1622931061.8709188-CDS-H-paniculata_contig8451:5032..51651622931061.8709188-CDS-H-paniculata_contig8451:5032..5165Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8451 5033..5165 +
1691481572.4237852-CDS-H-paniculata_contig8451:5032..51651691481572.4237852-CDS-H-paniculata_contig8451:5032..5165Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8451 5033..5165 +
1622931061.8849757-CDS-H-paniculata_contig8451:6088..62331622931061.8849757-CDS-H-paniculata_contig8451:6088..6233Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8451 6089..6233 +
1691481572.4332705-CDS-H-paniculata_contig8451:6088..62331691481572.4332705-CDS-H-paniculata_contig8451:6088..6233Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8451 6089..6233 +
1622931061.969668-CDS-H-paniculata_contig8451:7313..74011622931061.969668-CDS-H-paniculata_contig8451:7313..7401Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8451 7314..7401 +
1691481572.4486208-CDS-H-paniculata_contig8451:7313..74011691481572.4486208-CDS-H-paniculata_contig8451:7313..7401Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8451 7314..7401 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig8451.16449.1

>prot_H-paniculata_contig8451.16449.1 ID=prot_H-paniculata_contig8451.16449.1|Name=mRNA_H-paniculata_contig8451.16449.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=226bp
LIPEGAVDPKYIEESMDTPDTGSFMHLHLGIDAAGLDDLDIHYSVVESWV
ESIDAPMNMFIVSIPTVLDPGLAPEGKHLVHIYTAGNEPYALWEGLKRGS
PEYEALKKKRAEGMWKALEKIIPDVRERTEVELVASPLTHEFWNRRFRGS
YGPGWRAGEAEFPGCVTPLKGLLHCGDSTLPGLGLPAVAASGMNAASTLT
PVWKQLRLLWDMQDKGLIDSKFSDF*
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mRNA from alignment at H-paniculata_contig8451:468..7401+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig8451.16449.1 ID=mRNA_H-paniculata_contig8451.16449.1|Name=mRNA_H-paniculata_contig8451.16449.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6934bp|location=Sequence derived from alignment at H-paniculata_contig8451:468..7401+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CTTATCCCCGAGGGTGCTGTGGATCCCAAGTATATTGAGGAGAGCATGGA
CACCCCGGACACCGGCAGCTTCATGCACCTGCATCTAGGGATAGATGCAG
CGGGATTGGATGACCTCGATATTCACTACTCGGTGCGGATGGTTTATTAT
TGTAGAGTTGTTCTCATGGGATAAAACCATTATCAGATGAAATCAGCGCG
TGTTAGAAAAAAAGTACATCGGAATGTTTGGAAACCATATTTTTGTTGCT
GTGTAGGATGGTCCACGTTCTTGGGAACGTTCTGGGAATGCCCGTTGTTA
TTAGTGGTATTCGAAAGGACGGCATGCTTGCAGCACATGCCCTTTCGATA
AATTGGCACGTGTGTTGTACACGGCAAAGTTGACAATAGTGCCCAGAAAC
TTGAAGTGTGTGTTGCACGTGTGCTGTGTTTTTTATTGTACTCTGTGCGC
GCACGTATGTATGTATGCCCCTGTTTCGTTGTTTTTTACCTTGAGTGCAG
TGTTGGAAAATGATTCATTTTTTCGCAGTGCAACAAAACAAACGTCGGAT
GTTTTACGTGTCGCACGATATCGTTTTTTTTTTTTTTTTTTTTTTGCGAA
CGATAATCTCGACACGTGCGTTGCATCGAATATCGCACGGTATGTCCATG
TTCCCAGTTGCCATGATTTTTAACCCTCCCGGAAAAATAAACATACTTGA
AAATGGTTTATGCACAAAAATTGGGAAGTATTCGCCTGATTTTCCGAATG
AGCTCGTGTGTTTTACGTGCCCCGGACCATCCACGACTGGTAATATTGGT
CGTAAATCGAATGAATAGGGGTGGGTACTTTATATCTCATGTGTCTGTTG
ATTCTGAAACTCAGGCGAATACTTTTCCGGTTTTTTTTTTTTTTTGCAAA
CCCTTTGCAAGTATTCGTATTTGTCCGGGCGGGGGGGGTGTATGGTTTCA
TACGGTATGTTGTTCGATGGTTTTTATTTAGTATGGTGTTATCGTTAGTA
TTGTCATTGTTCGGTGGGCTTGACAAATGCTGAGGGTGAATTATTATACG
CAAATACTCGCCCAATCATTCGTGAACATATCTGCGTTTTATGGAGGGTT
TTTTCATGTGACTTCATCAACCTGCAACTTGCTTTCGAACTTGGTGCATT
AAACTCACTTATTGGATGGAAATATAGGCGGACTTGGCTACGTCCTATGT
GCGTATGCGTATATGTATGCACAGTAGGAGGGAGCGGTCAGCTTTGTTTT
TTATCGTTACTGTGCTGTTTCTTTTTTTTTAAATATCGAAAGTTGTTGTT
CGAATTTGATTTGGGAAAAAAAAAACAATTAAAAAAAACAAAACATTTTT
TTGTCTTTTGCAACGCATTCGAGAACATGCCAAGGGAAATTGATTTTACG
CAACAATGCACCTAGAAGATTTCATTTGATATGAGTTACACTACAAATCT
GCAAAGGTTTCGCCCTGGTCGCCGACCGTTCTGGAGATATGAAAAAAAAA
AAATGACCTGAAAAAATACAAACAAACAAAAAACGCACCCAATCAGTGTA
ATATCTCACCAACGACAATGCGCACAATACACAGGTCGTCGAGTCCTGGG
TGGAGTCCATCGACGCCCCAATGAACATGTTCATCGTCTCAATCCCGACC
GTGCTGGATCCTGGGCTCGCACCAGAGGGGAAGCATCTCGTGCACATCTA
CACCGCGGGCAACGAGCCTTATGCTCTGTGGGAGGGTTTGAAGCGAGGTT
CGCCGGAGTACGAGGTATCGAATCGTGCAATGATTAGAAGGGGAGGGAAG
TGTTGGCTTAGGGCTGTTTTGAACGTTGGCGTTCTTCACCTCTTTTTTTT
TTTCTTCTTTTTTTCTTTCTATTCATTTTTGTCGATGAACCTTTTCTTTT
TTTCCCTCCTTCTCCTGATAATAGTGTTACACGTTTAGGATTACTAAGTC
GGGAAATTCGGAATACCCTGTCGAATAAATTGGGCTCAAGGAAGAAACAG
TAATTTTTAGCAGAAGTGTTAACTTGAAAAAAAATGAGAAATTTCTACAA
CTTTGCAACAAAATTAAGCTCGCAGAGTAAAAGAAAAAAGAAAAAAAGAA
AGAACCCCCCCCCCCCCCCCCCCTGGTTAACAAAATAAATATTTACAACG
ACCCCTAAATCTATAGGCGAAATTTCTCGTAGAAGGCACGGAAATCTTAG
GGTCATACCTCAACAGAATTTCATCCTTGAGGGCATTTCGAAATCTGGGA
ACTTTGGGTGGGGCGTGAAAAGAACGAAAATTCCCAGATTTTGAATTTTT
TTCCCGAAGGGGGTCAATTCTGCTGGTATATGGCACAAACGTTTTCCATT
AGACCCCGTTGAGGACTTGGAATTTTTGGAATTTTTGGAATTTCGGCTTT
TTTCAGCTTTTATCATTTCCGCCCACAACATGGGTCGCCAGATTGATTCT
CGTACTGCATATAATTTGTCCTTTGGAATTTTTTTGTGTGACAATACTTT
GGCTTATGTTGTACCCAATACAGGGCGAGCGGGGAGGGGCGGGGGGGGGC
GTGCCCCCGTTATTTTTCATGCCGTGTTTAGTATTTAGCTTTGAGACCTT
TGGTCATGATTCATGTGGTCCTGGAGAGGGATGAGCCTTTCGTTTCATAC
CTCCAATGGCTACAAGTACGGTGATGTCTCTCTTCCGTACTTGTATTTAT
GTCGCTCAAATTTGTTCCTACCAAGGTATTTATTTTCAGGTCCTATCTAC
CTCTCCCCCTTCCCCGTGGAGAGCGCTGGAGAATTAAGTGGTCCGTTTTG
ACGCCCTCCGCTCCGTTCTCTTGAGGACACGAGTTCAATGGCCTCACAAC
TCCGACATGCCCACACTGCCTACTTGGTTCGGCCGAACCGGGGTGGCGGC
GCCTACCCCGCAGAGGAATAAATAACTCTGTTCTGTTAAAGGAAATGTAG
ACATACTTTGGTAAAATACTTCAAGTATGGAAGCATCGGTAAAGGTTTTT
GCCTCAGCCTTCCGGCGGTTAAAAAAAAACAAGAACAAAAAACTCCGACA
TGCAAAGTATGACCAACCCTCCCCCATCCCCTCGTCCCCCCCCCCCCCAA
TGCTGTAAGTTTGGTGATTAAGTAGAAACACCCGAATTTGAGGTCAGCTG
AATAGTACATAACCTACCTCTAAAAAAACATGGGTACAGGGGAGCTATTA
TACTAATTTGATTAGTGCGAGGTTTTCAGACGTTTAATTCACCTGACTAT
GGCCTACGGCCGTAGCTCGTTCGAGTAGGGCGGTGCGTGTACTGCACCAA
CTTGAGAGAAAGGTTTTAGTGGGCGAGAGTCCCGCACTACCCTGAGCTAA
GCTAAGTCGCGCGAACGCTCGGGGTGCCTAGCCCACATGACTGCCGCAAG
GTAGACTACTCAGGCCTGCAGGTAACTGATACACAAACCCGACCTCGGAG
GTAAGTGTTGCGTGAAGGCTCCCTCCCTCTCCCTTAAGGAACAAATACTG
ACTACGGCAAGGTTGACTTGCGAAATATTTTCTTTTTGTGGTGGTGTCTG
TCGTCCATGTAGAAACTGTTGCATGTTATTTCTACATATTTACATGTGCG
AACCCCCCCCACCCCCTCCCCCGCTTCTATCGTTGCATGCTTTCACGATG
ATAATTATGATGCGAGAATTATTTTTTATCGGAAATCGAACGGTTCAAGG
GATTGGCGGATCTCTTGTCTCGAGTACGCTGGTCCCAGTTGTCCGTGCAT
TTTGTTTCTTGCTGAAAAGTGTGGGTCTTCGATGGTGGAGGACCCGCCAT
CATTCACAAACAAAGACGACAGATACAGATTTTCTTCTCTGCCTGCATTG
TGAGAGCTGTCGAAACCAACGTCACGAATCGATACGCTCGAGAAGGTACA
TGGGACGACCTTGTCTTGACGAGAAACATTGTTGTTGTTGTTGTTGTTTT
TATTATTGTTATTGAGAACACGATGCTCCCGAGAGAGACTGACTCTCGAG
GGGACACCGCCTGCTCTATGCGGGTCGGTTCTAGGTCTTTGGATGTAGAG
CGGAGCAATCAATTGAGTTTTGTTCGGTCGTAGATGGAGTGACCATCTAA
GGTCGGACACAGCTAGAAAGCTGTTCCGAGAAAGGGACAAAATGCCATTG
GTTGTTGTGTAGGGGGTCGGGGTTCAGGAAGACCAGAAACGTCAGGATCG
TCAGGAACGTGCTCTCCACAATAATAGTAATAATAATGTAGAGAGCACGT
TCCTGACATTCCTAACGCTTCTGGGGTTCCTGAACCCCGACCCCCTACAC
AACAACCAATGCTATTTGTCCTTTTCTCGGAATAGCTTTCTAGCAGTGTC
CGACCTTAGATGGTCACTCCATCTCCGACCGAACAAAACTCAAGTGCTTG
CTCCGCACTACATCCAAAGACCTAGAACTAACCCGAATAGAGCAGGTGGT
GTCCCCTCGAGAGCCAGTCTCTCCCGGGAGCATCGTATTCTCATTATCAT
TATCATTATCACTGTTATTTTCCCAACGCTTGGCAGCAACCTCAACCCTA
ACCGGTCCCTATCAGGCGCTGAAAAAGAAACGGGCCGAGGGAATGTGGAA
AGCCCTTGAGAAAATCATCCCGGACGTACGTGAGAGAACCGAAGTGGAGC
TGGTGGCAAGCCCTTTAACGCACGAGTTTTGGAACAGGAGATTCCGAGGT
AATGCTGCAACCAAAGTCGTATAAATGATCAAACGATCGAAGGGGGGGGA
GAGTAGCGTATCGGATCTGGAAATTTTTATGAGAGGCGAGGTGTTAGTTT
GTTTTTTGGGCGGGGAGACATTTGACAGTGTTGAAATTAGTACTAATATT
TCGCGTGTCGTGGTAAGACCATCGACCAAGCGTCTTAGAAGGGACGGGGG
CTCGGTGGGAGGGAGGGGCGGGGTGTGTGTAACAAACTCAAGAAGACTGT
CTTGAATTCCCGCCCTCCTGTCAACCGCTCTGGTTTCATCTCGTTTTTGC
GGAAAAAACGATATACGAAGGTACAGCTTGTATTCTTTATATTTAAGCGG
CTTAGTGAGTGCCAAGTCGCTTCGACCTCCCTGACGTCTAGCTTGGACGT
ACGTAGGATCGGCTCAACCCTGACGGAGCCTATGTACTCCCCCGATCAGG
TGTGTAGCAGGACTTGTTTTGATCTTTTGGCCGTTGCGAAACGAATTCGG
TGTTTCCCCCGTTCGTACCGTACACCAACTTACAGGAGCAAAAAAAGGCC
CCAAACGACCAACCTAAACACGACCCTCTCTTTTAGGTACCTGAGATGAT
GCACTACATATACTCTAACCAGCTGTGCCAGCAGTAGTAGAGCTGGTTAA
ACATTTATTCTATCGACTTGTTCGTTCATCAGTATTCACGACTGGTCGTT
GGCATCTATATATATATATTCTTCGTTTTCGAGATCCTTTTCCAAAAGGA
ATGCTTTCTGTAATAGAGGTCAGTACAGATGAAAAACACGTTTTTTTCTT
GTTCCCAAAGGTTTCCCTTCGCTAGGGCGCGTTTGATATGTTGTCACACA
CGCACACACACACACACACACACACACACACACACACACACACACATACA
TACGTGCGTTTATGATACCAGGTTCCTATGGGCCAGGTTGGCGTGCCGGA
GAAGCGGAATTTCCCGGCTGCGTGACGCCCTTGAAGGGCTTGCTACACTG
CGGGGACTCCACCCTACCAGGCTTGGGGCTTCCCGCGGTCGCTGCTAGCG
GTATGAACGCTGCCAGGTAAAGAGTCTCGAATTTGAAACTGGGAATATCT
GCAGCACAATAATTATATTTAATCCATGCTGTAGTTATAATGGGGTAGAA
TACCATCGAGGAGTACGTCTCCCTCGGCGCCTCCTCTCCTCGAACACCCT
CCTAGTGATGACGCCTTTTGGGATGCTGAAACCCCCATGGTAGATTTCCG
TTGGCATTTAGTACGACCATGAGGATGGGTGATTGAGTAGTGGCTGGTAT
CACCCGTGTGAGATGGAGCCTAGCCGGCGAAAGTCCGGCATACTCCATCA
CGGCGTCCTGGCCGTGTGGGGATGCGAGAGACCATGGCACACGTTTTCAT
GAGTCCTCTCCCCCCCTCGTTGATAACGTCCGAAATGTTGTTATCTCGGA
AGGTTGTTACATTCTGTACTTTACGCTAGTTGTCCCAAGGTTAACATACT
GGCTGCCCTTCTCCACAACATGCCTCCCTAATTCTGAGTAAAAAACATTA
ATGACATGATGATAATTATGGAGATAGAGCGCCGCCACTTTTCAGACAGT
CAGATATAGACAAGAAGTACGTCCAGCACAGACAGATACTAGTAGGTGGT
ACGGCGTTGGTCACCGGTGTCAGCGCTCGACATTTTTTATGTGCTGTCAC
ATGACATTTTTGTTGTGAAACTGCTGCATTTGGCTGTACCGTGCATCTGC
CGGATATATGATGTCAGCATAAAAATAAAGTTTTACTCCATAATACAAAA
AAGTGTTCCATTATCGCCATATTGAAAAAAACGCTTGGGATGAAGTATTG
AACTATTTCATGACCGACCTTCATCGTCATCCTTTTGTTTTTTTCCCTCA
AATATAACATCACCTGTTTGCTCAGACCCGTCGGTCGCACGGGTATAATG
TGTCTCGTGCCGAATCCGACCCTTTGTTTGTACTAACCCTGGCACTGAAA
ATAGTTATGCAACGGGTTAATTGAGTACAAGGGCTCAGGGATTTCTTTTC
GTGAAGAACACTGACCCTTGTTCCCACCTCTCTCGATCACCTGTTCGCCC
TGATGACCGTGGCCTGCTTTTGTGTTTGTTGGGCTACCGACGGCAGCACA
TTAACGCCTGTGTGGAAGCAGCTGCGACTTCTTTGGGACATGCAGGACAA
GGGCCTGATAGACAGCAAGTTCAGCGACTTTTGA
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Coding sequence (CDS) from alignment at H-paniculata_contig8451:468..7401+

>mRNA_H-paniculata_contig8451.16449.1 ID=mRNA_H-paniculata_contig8451.16449.1|Name=mRNA_H-paniculata_contig8451.16449.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1356bp|location=Sequence derived from alignment at H-paniculata_contig8451:468..7401+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CTTATCCCCGAGGGTGCTGTGGATCCCAAGTATATTGAGGAGAGCATGGA
CACCCCGGACACCGGCAGCTTCATGCACCTGCATCTAGGGATAGATGCAG
CGGGATTGGATGACCTCGATATTCACTACTCGCTTATCCCCGAGGGTGCT
GTGGATCCCAAGTATATTGAGGAGAGCATGGACACCCCGGACACCGGCAG
CTTCATGCACCTGCATCTAGGGATAGATGCAGCGGGATTGGATGACCTCG
ATATTCACTACTCGGTCGTCGAGTCCTGGGTGGAGTCCATCGACGCCCCA
ATGAACATGTTCATCGTCTCAATCCCGACCGTGCTGGATCCTGGGCTCGC
ACCAGAGGGGAAGCATCTCGTGCACATCTACACCGCGGGCAACGAGCCTT
ATGCTCTGTGGGAGGGTTTGAAGCGAGGTTCGCCGGAGTACGAGGTCGTC
GAGTCCTGGGTGGAGTCCATCGACGCCCCAATGAACATGTTCATCGTCTC
AATCCCGACCGTGCTGGATCCTGGGCTCGCACCAGAGGGGAAGCATCTCG
TGCACATCTACACCGCGGGCAACGAGCCTTATGCTCTGTGGGAGGGTTTG
AAGCGAGGTTCGCCGGAGTACGAGGCGCTGAAAAAGAAACGGGCCGAGGG
AATGTGGAAAGCCCTTGAGAAAATCATCCCGGACGTACGTGAGAGAACCG
AAGTGGAGCTGGTGGCAAGCCCTTTAACGCACGAGTTTTGGAACAGGAGA
TTCCGAGGCGCTGAAAAAGAAACGGGCCGAGGGAATGTGGAAAGCCCTTG
AGAAAATCATCCCGGACGTACGTGAGAGAACCGAAGTGGAGCTGGTGGCA
AGCCCTTTAACGCACGAGTTTTGGAACAGGAGATTCCGAGGTTCCTATGG
GCCAGGTTGGCGTGCCGGAGAAGCGGAATTTCCCGGCTGCGTGACGCCCT
TGAAGGGCTTGCTACACTGCGGGGACTCCACCCTACCAGGCTTGGGGCTT
CCCGCGGTCGCTGCTAGCGGTATGAACGCTGCCAGGTTCCTATGGGCCAG
GTTGGCGTGCCGGAGAAGCGGAATTTCCCGGCTGCGTGACGCCCTTGAAG
GGCTTGCTACACTGCGGGGACTCCACCCTACCAGGCTTGGGGCTTCCCGC
GGTCGCTGCTAGCGGTATGAACGCTGCCAGCACATTAACGCCTGTGTGGA
AGCAGCTGCGACTTCTTTGGGACATGCAGGACAAGGGCCTGATAGACAGC
AAGTTCAGCGACTTTTGACACATTAACGCCTGTGTGGAAGCAGCTGCGAC
TTCTTTGGGACATGCAGGACAAGGGCCTGATAGACAGCAAGTTCAGCGAC
TTTTGA
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