prot_H-paniculata_contig8449.16445.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig8449.16445.1
Unique Nameprot_H-paniculata_contig8449.16445.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length258
Homology
BLAST of mRNA_H-paniculata_contig8449.16445.1 vs. uniprot
Match: D7FI44_ECTSI (Bulb-type lectin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI44_ECTSI)

HSP 1 Score: 298 bits (764), Expect = 2.470e-92
Identity = 155/257 (60.31%), Postives = 192/257 (74.71%), Query Frame = 0
Query:    1 MIGRSFAAEDAHDKIRAAVIDLFEILELEATGDIEKASEAIGEAVVSTAADMEKKPAGQANFFCTLRSKVKAFSRAEVTCGKYDFRPDSAEYTAASRSAKKLSSSDWCGFDLIWKKREGTLAIREALESYIAFEEATLRYGEEVTLDKPLVSVNKLYQLEIYSNVLRVVNTATSTVVDTIFKGDGTLSKKTSAHLAPTGEFVVDLTMITGFSMTEMAMVLWTAPNTEGSRGSYGRMQNDGKFVIYNRNGQQLWSSIS 257
            MIGRSFA EDA D IRAAVI+LFEILE E   ++E+A+EAI  AV++TA +ME KP GQA+FF TL+SK+      E+T GKYDF+ ++ EY  A+RSAKKLSS+DW GFDLIWKKR G +A++EALE++I FEEATLR GE +T D+PL SV+  Y+LEI    LRVV T+T  V  T+F+ +GTL    SAH+   G FV+DLTMITGF  TE  MVLW APNTE   G Y RMQN+GKFV++NR G+ LWS+ S
Sbjct:  578 MIGRSFATEDAQDLIRAAVINLFEILESEVESNLEEAAEAISNAVLATAKEMESKPPGQADFFPTLQSKIA--ETPEIT-GKYDFKTNTTEYQTAARSAKKLSSTDWVGFDLIWKKRLGNIALKEALETHIKFEEATLRLGEVITTDEPLTSVDGNYRLEISGKALRVVKTSTGAVAATLFEAEGTLGSSASAHMEENGSFVLDLTMITGFDRTETRMVLWVAPNTESGSGGYARMQNNGKFVVFNRKGKALWSAAS 831          
BLAST of mRNA_H-paniculata_contig8449.16445.1 vs. uniprot
Match: A0A6H5JKM5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKM5_9PHAE)

HSP 1 Score: 260 bits (665), Expect = 7.830e-78
Identity = 140/238 (58.82%), Postives = 175/238 (73.53%), Query Frame = 0
Query:    1 MIGRSFAAEDAHDKIRAAVIDLFEILELEATGDIEKASEAIGEAVVSTAADMEKKPAGQANFFCTLRSKVKAFSRAEVTCGKYDFRPDSAEYTAASRSAKKLSSSDWCGFDLIWKKREGTLAIREALESYIAFEEA---TLRYGEEVTLDKPLVSVNKLYQLEIYSNVLRVVNTATSTVVDTIFKGDGTLSKKTSAHLAPTGEFVVDLTMITGFSMTEMAMVLWTAPNTEGSRGSYGR 235
            MIGRSFA EDA D IRAAVIDLFEILE E   ++E+A+EAI  AV++TA +ME KP GQA+FF TL+S +      E+T GKYDF+ ++ EY  A+RSAKKLSS+DW GFDLIWKKR G +A++EALE++I FEEA   TLR GE +T ++PL+SV++ Y+LEI    LRVV T+T  V  T+F+ +GTL    SAH+   G FV+DLTMITGF  TE  MVLW+APNTE   G Y R
Sbjct:  491 MIGRSFATEDAQDLIRAAVIDLFEILESEDESNLEEAAEAISNAVLTTAKEMESKPPGQADFFPTLQSIIA--ETPEIT-GKYDFKTNTTEYQTAARSAKKLSSTDWVGFDLIWKKRLGNIALKEALETHIKFEEASSATLRLGEVITTEEPLISVDENYRLEISGKALRVVKTSTGAVTSTLFEAEGTLGSSASAHMEENGSFVLDLTMITGFDRTETRMVLWSAPNTESGSGGYAR 725          
BLAST of mRNA_H-paniculata_contig8449.16445.1 vs. uniprot
Match: D7FI45_ECTSI (MACPF domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI45_ECTSI)

HSP 1 Score: 250 bits (639), Expect = 3.770e-73
Identity = 128/235 (54.47%), Postives = 170/235 (72.34%), Query Frame = 0
Query:    1 MIGRSFAAEDAHDKIRAAVIDLFEILELEATGDIEKASEAIGEAVVSTAADMEKKPAGQANFFCTLRSKVKAFSRAEVTCGKYDFRPDSAEYTAASRSAKKLSSSDWCGFDLIWKKREGTLAIREALESYIAFEEATLRYGEEVTLDKPLVSVNKLYQLEIYSNVLRVVNTATSTVVDTIFKGDGTLSKKTSAHLAPTGEFVVDLTMITGFSMTEMAMVLWTAPNTEGSRGSYGR 235
            MIGRSFA EDAHDKIRAAV+DLFE+LELE   + E+A+E +  AV++TA +ME  P GQA+FF  L+S ++A  +     GK+DF+  + +Y AA+RSA++LSS+DW GFD IW KR G +A+++AL+ +  FEEATLR GE VT+ +PLVSVN+ Y+LEI    LRVVN  +  VVDT+F+ +GTL     AH+   G FV++L MITGF  TE  +VLWTAPNT+  +G Y R
Sbjct:  789 MIGRSFATEDAHDKIRAAVVDLFEVLELELEANTEEAAERLSGAVLATAKEMETAPPGQADFFHALQSNMRAMPKLS---GKFDFKTGTTQYEAAARSARQLSSTDWVGFDDIWNKRLGNIALKDALDHHRKFEEATLRLGEVVTITEPLVSVNEKYRLEIAGKTLRVVNADSGAVVDTLFEAEGTLGSNAHAHMQENGSFVLELRMITGFDRTETRVVLWTAPNTDSGKGGYAR 1020          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8449.16445.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FI44_ECTSI2.470e-9260.31Bulb-type lectin domain-containing protein n=1 Tax... [more]
A0A6H5JKM5_9PHAE7.830e-7858.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FI45_ECTSI3.770e-7354.47MACPF domain-containing protein n=1 Tax=Ectocarpus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036426Bulb-type lectin domain superfamilyGENE3D2.90.10.10coord: 129..257
e-value: 7.1E-9
score: 37.5
IPR036426Bulb-type lectin domain superfamilySUPERFAMILY51110alpha-D-mannose-specific plant lectinscoord: 219..256

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8449contigH-paniculata_contig8449:2714..9335 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8449.16445.1mRNA_H-paniculata_contig8449.16445.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig8449 2212..10148 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig8449.16445.1 ID=prot_H-paniculata_contig8449.16445.1|Name=mRNA_H-paniculata_contig8449.16445.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=258bp
MIGRSFAAEDAHDKIRAAVIDLFEILELEATGDIEKASEAIGEAVVSTAA
DMEKKPAGQANFFCTLRSKVKAFSRAEVTCGKYDFRPDSAEYTAASRSAK
KLSSSDWCGFDLIWKKREGTLAIREALESYIAFEEATLRYGEEVTLDKPL
VSVNKLYQLEIYSNVLRVVNTATSTVVDTIFKGDGTLSKKTSAHLAPTGE
FVVDLTMITGFSMTEMAMVLWTAPNTEGSRGSYGRMQNDGKFVIYNRNGQ
QLWSSIS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036426Bulb-type_lectin_dom_sf