mRNA_H-paniculata_contig8448.16444.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig8448.16444.1
Unique NamemRNA_H-paniculata_contig8448.16444.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig8448.16444.1 vs. uniprot
Match: D7G6E5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6E5_ECTSI)

HSP 1 Score: 364 bits (934), Expect = 2.740e-123
Identity = 205/299 (68.56%), Postives = 231/299 (77.26%), Query Frame = 1 
Query:    1 MKFATALVGASALCA-TDAFVPNVRVGSSFGQAAATSRV-AVESAPESRRSXXXXXXXXXXXSKNGGIPKTVSSKIANIFRGTKGSKGNFNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAAGLGILWAAYISLLDTQPLLTKSLTSMTGFALGDLLAQKFLEKKEDLDLVRLMKLASFGALVHGSTGHFFYNFLDSKIPGTAALTVAKKVFIDQVMWNPVFGCMFFGYMGAVDGLGFTAIGDKIKNNLWTSVKGSWTVWPVAHAINFRFIPTSQRLLYINTIQVFYNCFLSIISQRD 891
            MKF TALVGA ALCA TDAFVP     SS    +  S V A   A  + R            SK GG+P++VSSKI NIFRG  GS+     XXXXXXXXXX                  KA GLG++WAAY+SLL +QPLLTKSLTSMTGFALGDLLAQKF++KKE++DL RL+KLASFGAL+HGS+GHFFYNFLDSKIPGTAALTVAKKVFIDQV+WNP+FGCMFFGYMGAVDG+G + I +KIKNNLWTSVKGSWTVWPVAHAINFR IPTSQRLLYINTIQ+FYNCFLS+I+QR+
Sbjct:    1 MKFTTALVGAGALCASTDAFVPAAVPASSSTFVSKRSVVDAAAPAILASRGGDVMMSLGGGGSKKGGLPQSVSSKITNIFRG--GSRKGNXXXXXXXXXXXXGKVPPLGASSSAEGDGEKKAKGLGVIWAAYMSLLASQPLLTKSLTSMTGFALGDLLAQKFIDKKEEIDLPRLLKLASFGALIHGSSGHFFYNFLDSKIPGTAALTVAKKVFIDQVLWNPIFGCMFFGYMGAVDGMGPSGISEKIKNNLWTSVKGSWTVWPVAHAINFRMIPTSQRLLYINTIQIFYNCFLSVIAQRE 297
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BLAST of mRNA_H-paniculata_contig8448.16444.1 vs. uniprot
Match: A0A835Z9Q4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9Q4_9STRA)

HSP 1 Score: 268 bits (685), Expect = 2.510e-85
Identity = 126/178 (70.79%), Postives = 148/178 (83.15%), Query Frame = 1 
Query:  355 KAAGLGILWAAYISLLDTQPLLTKSLTSMTGFALGDLLAQKFLEKKEDLDLVRLMKLASFGALVHGSTGHFFYNFLDSKIPGTAALTVAKKVFIDQVMWNPVFGCMFFGYMGAVDGLGFTAIGDKIKNNLWTSVKGSWTVWPVAHAINFRFIPTSQRLLYINTIQVFYNCFLSIISQR 888
            KA GL  +WAAY + LD +P+LTK+LTSM GF LGD LAQKF+ K E +D  RL ++ASFG L+HG+TGHFFY  LDSKIPGTAALTVA KVFIDQ +WNP+FGCMFFGYMG  +GL  +A+  +I+NNLW SVKGSWTVWPVAHAINFR IPTSQRLLYIN++Q+ YN FLSI+SQR
Sbjct:  110 KAGGLMAIWAAYNNSLDKRPILTKALTSMIGFGLGDFLAQKFISKSEKIDWERLGRMASFGLLIHGTTGHFFYGMLDSKIPGTAALTVATKVFIDQAIWNPIFGCMFFGYMGFAEGLSPSAVKARIQNNLWASVKGSWTVWPVAHAINFRCIPTSQRLLYINSVQIGYNMFLSILSQR 287
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BLAST of mRNA_H-paniculata_contig8448.16444.1 vs. uniprot
Match: W7U673_9STRA (Mpv17-like protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U673_9STRA)

HSP 1 Score: 244 bits (622), Expect = 3.790e-76
Identity = 111/175 (63.43%), Postives = 140/175 (80.00%), Query Frame = 1 
Query:  367 LGILWAAYISLLDTQPLLTKSLTSMTGFALGDLLAQKFLEKKEDLDLVRLMKLASFGALVHGSTGHFFYNFLDSKIPGTAALTVAKKVFIDQVMWNPVFGCMFFGYMGAVDGLGFTAIGDKIKNNLWTSVKGSWTVWPVAHAINFRFIPTSQRLLYINTIQVFYNCFLSIISQRD 891
            L +LW  Y  LL  QPLLTK+LTS  GF++GDLLAQKF++K E +DL RL+KLA FG LVHG TGH+FY FLD K+PGT+A+TVA KV IDQ++WNP+FG MFFG++G  +G     I ++I+ +LW SVKGSWTVWP+AHAINFRFIP SQRLLYIN++Q+ YN FLS ++ R+
Sbjct:  101 LQLLWKGYNQLLKDQPLLTKALTSFVGFSVGDLLAQKFIDKSEVVDLKRLLKLAFFGLLVHGPTGHYFYGFLDGKMPGTSAVTVASKVAIDQLLWNPIFGTMFFGWLGLTEGQNLEGIKNRIEKDLWASVKGSWTVWPIAHAINFRFIPNSQRLLYINSVQIGYNMFLSFLANRN 275
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BLAST of mRNA_H-paniculata_contig8448.16444.1 vs. uniprot
Match: A0A7S2FYX3_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FYX3_9STRA)

HSP 1 Score: 241 bits (614), Expect = 2.070e-75
Identity = 112/172 (65.12%), Postives = 137/172 (79.65%), Query Frame = 1 
Query:  376 LWAAYISLLDTQPLLTKSLTSMTGFALGDLLAQKFLEKKEDLDLVRLMKLASFGALVHGSTGHFFYNFLDSKIPGTAALTVAKKVFIDQVMWNPVFGCMFFGYMGAVDGLGFTAIGDKIKNNLWTSVKGSWTVWPVAHAINFRFIPTSQRLLYINTIQVFYNCFLSIISQRD 891
            LWAAY + L+T P+LTK+LTSM GF LGD+LAQ F+EKK + D++R ++LASFG L+HG+TGH+FY  LD  IPGT A+ V  KV IDQV+WNP+FG MFF YMG  +G G  A+  K+K +L T V GSWTVWP+AHAINFRFIPTSQRLLYINTIQ+FYN FLSII  ++
Sbjct:   84 LWAAYNNKLETNPILTKALTSMIGFTLGDILAQNFVEKKGEYDIMRTIRLASFGFLIHGTTGHWFYGKLDKAIPGTGAMQVFSKVGIDQVLWNPIFGVMFFSYMGFTNGDGPAAVAAKVKRDLMTQVTGSWTVWPIAHAINFRFIPTSQRLLYINTIQIFYNVFLSIIGNKE 255
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BLAST of mRNA_H-paniculata_contig8448.16444.1 vs. uniprot
Match: A0A7S2XWX9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XWX9_9STRA)

HSP 1 Score: 235 bits (599), Expect = 1.420e-72
Identity = 108/170 (63.53%), Postives = 132/170 (77.65%), Query Frame = 1 
Query:  376 LWAAYISLLDTQPLLTKSLTSMTGFALGDLLAQKFLEKKEDLDLVRLMKLASFGALVHGSTGHFFYNFLDSKIPGTAALTVAKKVFIDQVMWNPVFGCMFFGYMGAVDGLGFTAIGDKIKNNLWTSVKGSWTVWPVAHAINFRFIPTSQRLLYINTIQVFYNCFLSIISQ 885
            LWAAY + L++ P+ TK+LTS+ GF+LGD+LAQKFL   E  D +R+ +LASFG L HG  GH+FY FLD+KIPGTA   VA KV IDQ++WNP+FG  F GYMG  +G     +G KIKN+L  +V GSWTVWP+AHAINFRFIPTSQRLLYIN+IQVFYNCFLS ++ 
Sbjct:  117 LWAAYNAALESSPITTKALTSLVGFSLGDILAQKFLSAGEPFDFLRMARLASFGLLFHGPVGHYFYGFLDTKIPGTALSVVASKVAIDQIIWNPIFGTFFLGYMGFAEGKNAGEVGQKIKNDLVKAVTGSWTVWPIAHAINFRFIPTSQRLLYINSIQVFYNCFLSFLAS 286
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BLAST of mRNA_H-paniculata_contig8448.16444.1 vs. uniprot
Match: A0A7S3AZ01_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3AZ01_9EUKA)

HSP 1 Score: 234 bits (596), Expect = 2.610e-72
Identity = 107/172 (62.21%), Postives = 134/172 (77.91%), Query Frame = 1 
Query:  376 LWAAYISLLDTQPLLTKSLTSMTGFALGDLLAQKFLEKKEDLDLVRLMKLASFGALVHGSTGHFFYNFLDSKIPGTAALTVAKKVFIDQVMWNPVFGCMFFGYMGAVDGLGFTAIGDKIKNNLWTSVKGSWTVWPVAHAINFRFIPTSQRLLYINTIQVFYNCFLSIISQRD 891
            +W  Y  +LD QPLLTK+LTS TGFALGD+LAQ F++K    D  RL++L+SFG LVHG++ H+FY FLD KIPG +A  V  KVFIDQV+WNP+FG MFF Y+ A +  GF  + DK++N L T V GSW VWP+AHAINFRFIP+SQR+LYIN+IQ+ YNCFLS+IS R+
Sbjct:  107 MWKGYSKMLDEQPLLTKALTSFTGFALGDILAQLFIQKTNPFDWARLLRLSSFGFLVHGTSSHWFYGFLDGKIPGKSAQVVFSKVFIDQVLWNPIFGIMFFSYVAAFELKGFDYVKDKVQNELLTQVTGSWKVWPLAHAINFRFIPSSQRVLYINSIQIGYNCFLSLISNRE 278
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BLAST of mRNA_H-paniculata_contig8448.16444.1 vs. uniprot
Match: F0YKE1_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YKE1_AURAN)

HSP 1 Score: 228 bits (580), Expect = 1.630e-71
Identity = 109/168 (64.88%), Postives = 129/168 (76.79%), Query Frame = 1 
Query:  376 LWAAYISLLDTQPLLTKSLTSMTGFALGDLLAQKFLEKKEDLDLVRLMKLASFGALVHGSTGHFFYNFLDSKIPGTAALTVAKKVFIDQVMWNPVFGCMFFGYMGAVDGLGFTAIGDKIKNNLWTSVKGSWTVWPVAHAINFRFIPTSQRLLYINTIQVFYNCFLSII 879
            +WAAY + L+  PLL K LTSM GF LGD+LAQ F+EK +  D+ R ++ +SFG LVHG+T H+FY  LD KIPGT A  VA KV IDQV+WNP+FG MFFGYMG  +G G      KIKN+L T V GSWTVWP+AHAINF+FIP SQR+LYINTIQ+FYNCFLSII
Sbjct:    1 VWAAYEAALEKDPLLIKGLTSMIGFFLGDVLAQCFIEKSDKYDIWRTIRFSSFGLLVHGTTSHWFYGKLDGKIPGTGAGAVASKVGIDQVLWNPIFGIMFFGYMGIFEGSGVGGTITKIKNDLLTQVTGSWTVWPIAHAINFKFIPNSQRVLYINTIQIFYNCFLSII 168
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BLAST of mRNA_H-paniculata_contig8448.16444.1 vs. uniprot
Match: A0A7S2RA66_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RA66_9STRA)

HSP 1 Score: 228 bits (582), Expect = 1.690e-71
Identity = 109/170 (64.12%), Postives = 130/170 (76.47%), Query Frame = 1 
Query:  379 WAAYISLLDTQPLLTKSLTSMTGFALGDLLAQKFLEKKEDLDLVRLMKLASFGALVHGSTGHFFYNFLDSKIPGTAALTVAKKVFIDQVMWNPVFGCMFFGYMGAVDGLGFTAIGDKIKNNLWTSVKGSWTVWPVAHAINFRFIPTSQRLLYINTIQVFYNCFLSIISQR 888
            WAAY  LL+TQPLLTK+LTSMTGF LGD+LAQ F++KKE  D++R ++L SFG LVHG+TGH+FY FLDSK+PGT  +TVA KV IDQV WNP FG MFF Y+G  +G  F  I  KIK +L T+V GSW VW  AH INF FIP SQRLLYIN+IQ+ YN FLS +  +
Sbjct:   14 WAAYNRLLETQPLLTKALTSMTGFTLGDVLAQNFVDKKEKYDVMRTVRLGSFGLLVHGTTGHYFYGFLDSKLPGTKPVTVASKVLIDQVFWNPCFGIMFFTYLGLAEGKSFADIMKKIKADLKTAVMGSWAVWVPAHTINFAFIPPSQRLLYINSIQIGYNIFLSFLGNK 183
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BLAST of mRNA_H-paniculata_contig8448.16444.1 vs. uniprot
Match: A0A7S2G6J1_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2G6J1_9EUKA)

HSP 1 Score: 228 bits (582), Expect = 3.150e-70
Identity = 107/171 (62.57%), Postives = 129/171 (75.44%), Query Frame = 1 
Query:  379 WAAYISLLDTQPLLTKSLTSMTGFALGDLLAQKFLEKKEDLDLVRLMKLASFGALVHGSTGHFFYNFLDSKIPGTAALTVAKKVFIDQVMWNPVFGCMFFGYMGAVDGLGFTAIGDKIKNNLWTSVKGSWTVWPVAHAINFRFIPTSQRLLYINTIQVFYNCFLSIISQRD 891
            W  Y  LLD +PLL K+LTS  GFALGD+LAQKF++K +  D  RL +LASFG LVHG+T H+FY +LD KIPGT+A  V  KVFIDQV+WNP FG MFF Y+  ++  G + + DK K  L T V GSW VWP+AH INFRFIP+SQR+LYINTIQ+ YNCFLS+IS RD
Sbjct:  110 WKQYEELLDAKPLLMKALTSFVGFALGDILAQKFIQKCDPFDWFRLFRLASFGFLVHGTTSHYFYGWLDGKIPGTSAKVVFSKVFIDQVLWNPCFGVMFFSYVALLEAKGISYVIDKTKTELLTQVTGSWKVWPLAHTINFRFIPSSQRVLYINTIQIGYNCFLSMISNRD 280
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BLAST of mRNA_H-paniculata_contig8448.16444.1 vs. uniprot
Match: A0A7S4M7F7_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4M7F7_9EUKA)

HSP 1 Score: 226 bits (575), Expect = 9.210e-70
Identity = 107/175 (61.14%), Postives = 130/175 (74.29%), Query Frame = 1 
Query:  367 LGILWAAYISLLDTQPLLTKSLTSMTGFALGDLLAQKFLEKKEDLDLVRLMKLASFGALVHGSTGHFFYNFLDSKIPGTAALTVAKKVFIDQVMWNPVFGCMFFGYMGAVDGLGFTAIGDKIKNNLWTSVKGSWTVWPVAHAINFRFIPTSQRLLYINTIQVFYNCFLSIISQRD 891
            L  LW +Y + LD +PLL K+LTSM GFALGD+LAQ F++K +  D  R ++L SFG LVHG+T H+FY FLD KIPGT    V  KVFIDQV+WNP FG MFF Y+ A +  G   + DK++N L T V GSW VWP+AHAINFRFIP+SQR+LYINTIQ+ YN FLSII+ RD
Sbjct:   60 LEALWKSYETALDEKPLLMKALTSMVGFALGDILAQTFIQKGDAFDWARFIRLTSFGCLVHGTTSHYFYGFLDGKIPGTGGKQVFTKVFIDQVLWNPCFGVMFFSYVAAFELKGIGYVKDKVQNELLTQVFGSWKVWPIAHAINFRFIPSSQRVLYINTIQIGYNMFLSIIANRD 234
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8448.16444.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6E5_ECTSI2.740e-12368.56Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z9Q4_9STRA2.510e-8570.79Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
W7U673_9STRA3.790e-7663.43Mpv17-like protein n=2 Tax=Monodopsidaceae TaxID=4... [more]
A0A7S2FYX3_9STRA2.070e-7565.12Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2XWX9_9STRA1.420e-7263.53Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3AZ01_9EUKA2.610e-7262.21Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
F0YKE1_AURAN1.630e-7164.88Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
A0A7S2RA66_9STRA1.690e-7164.12Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2G6J1_9EUKA3.150e-7062.57Hypothetical protein n=1 Tax=Haptolina brevifila T... [more]
A0A7S4M7F7_9EUKA9.210e-7061.14Hypothetical protein n=1 Tax=Prymnesium polylepis ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8448contigH-paniculata_contig8448:1804..9478 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score368.2
Seed ortholog evalue3.5e-99
Seed eggNOG ortholog2880.D7G6E5
KEGG koko:K13348
KEGG Pathwayko04146,map04146
Hectar predicted targeting categorychloroplast
EggNOG free text desc.Belongs to the peroxisomal membrane protein PXMP2 4 family
EggNOG OGsKOG1944@1,KOG1944@2759
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-10_001560.1
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001
Exons6
Model size954
Cds size894
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931061.0368862-UTR-H-paniculata_contig8448:1803..18631622931061.0368862-UTR-H-paniculata_contig8448:1803..1863Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig8448 1804..1863 -
1691481572.0287895-UTR-H-paniculata_contig8448:1803..18631691481572.0287895-UTR-H-paniculata_contig8448:1803..1863Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig8448 1804..1863 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931061.0517094-CDS-H-paniculata_contig8448:1863..20041622931061.0517094-CDS-H-paniculata_contig8448:1863..2004Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8448 1864..2004 -
1691481572.040519-CDS-H-paniculata_contig8448:1863..20041691481572.040519-CDS-H-paniculata_contig8448:1863..2004Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8448 1864..2004 -
1622931061.0686505-CDS-H-paniculata_contig8448:3673..37841622931061.0686505-CDS-H-paniculata_contig8448:3673..3784Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8448 3674..3784 -
1691481572.049598-CDS-H-paniculata_contig8448:3673..37841691481572.049598-CDS-H-paniculata_contig8448:3673..3784Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8448 3674..3784 -
1622931061.0836356-CDS-H-paniculata_contig8448:4301..44511622931061.0836356-CDS-H-paniculata_contig8448:4301..4451Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8448 4302..4451 -
1691481572.0625756-CDS-H-paniculata_contig8448:4301..44511691481572.0625756-CDS-H-paniculata_contig8448:4301..4451Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8448 4302..4451 -
1622931061.1020465-CDS-H-paniculata_contig8448:5056..52421622931061.1020465-CDS-H-paniculata_contig8448:5056..5242Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8448 5057..5242 -
1691481572.0727475-CDS-H-paniculata_contig8448:5056..52421691481572.0727475-CDS-H-paniculata_contig8448:5056..5242Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8448 5057..5242 -
1622931061.118874-CDS-H-paniculata_contig8448:8460..85091622931061.118874-CDS-H-paniculata_contig8448:8460..8509Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8448 8461..8509 -
1691481572.0833018-CDS-H-paniculata_contig8448:8460..85091691481572.0833018-CDS-H-paniculata_contig8448:8460..8509Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8448 8461..8509 -
1622931061.1308439-CDS-H-paniculata_contig8448:9221..94781622931061.1308439-CDS-H-paniculata_contig8448:9221..9478Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8448 9222..9478 -
1691481572.0980854-CDS-H-paniculata_contig8448:9221..94781691481572.0980854-CDS-H-paniculata_contig8448:9221..9478Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8448 9222..9478 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8448.16444.1prot_H-paniculata_contig8448.16444.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig8448 1864..9478 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig8448.16444.1

>prot_H-paniculata_contig8448.16444.1 ID=prot_H-paniculata_contig8448.16444.1|Name=mRNA_H-paniculata_contig8448.16444.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=298bp
MKFATALVGASALCATDAFVPNVRVGSSFGQAAATSRVAVESAPESRRSS
NVVMLLGGGGSKNGGIPKTVSSKIANIFRGTKGSKGNFNGGGGLGGGGGN
NKVPPLGASEASDDGEKKKAAGLGILWAAYISLLDTQPLLTKSLTSMTGF
ALGDLLAQKFLEKKEDLDLVRLMKLASFGALVHGSTGHFFYNFLDSKIPG
TAALTVAKKVFIDQVMWNPVFGCMFFGYMGAVDGLGFTAIGDKIKNNLWT
SVKGSWTVWPVAHAINFRFIPTSQRLLYINTIQVFYNCFLSIISQRD*
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mRNA from alignment at H-paniculata_contig8448:1804..9478-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig8448.16444.1 ID=mRNA_H-paniculata_contig8448.16444.1|Name=mRNA_H-paniculata_contig8448.16444.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7675bp|location=Sequence derived from alignment at H-paniculata_contig8448:1804..9478- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAAGTTCGCTACTGCTCTAGTTGGCGCGAGCGCCCTCTGTGCGACCGA
CGCTTTCGTCCCAAATGTGCGCGTTGGCAGCAGCTTTGGCCAGGCAGCTG
CGACTTCGCGAGTAGCGGTGGAGTCCGCACCAGAATCGCGCAGGAGCAGC
AATGTGGTGATGCTTTTGGGCGGAGGAGGGTCCAAGAATGGTGGCATCCC
GAAAACTGTGTCGTCGAAGATCGCCAACATCTTCCGAGGAACCAAGGGCA
GCAAGGGGTGAGAGGGGGCGAGATAGAGGGTAGAGAGGGAGTTGGTTGAG
AAAATAGACAGCAAGTAGGCCGCACCTCAAAAGGTTCTCGAGACGTTAGA
GATGGACATGACAGAAGGAACAGGAACGCAGGGGGGGTGTTAAAAAATCC
ATAACGTCCGCTTCTTCAACGAGACATCTGCTACACAGGAATGTGTCAAA
TATTGAGGATTTTCACATTTGAAAAATGTACAGGCTGTGTTGTATGTAGT
ACCTGGAGGTTTTACTGGTTCAAACAAAATAAAGCTTCCATGCATGGTCG
TGCAGGATGCTGCTGCGGCTGTTGCTCCGGCTGAGATACTATAATGCTTC
TTGATGGTGCTAGTGTGCGTATTGTTAGTTCTTGTGCGGTAGCTTGTGCT
GGCATTCGCCATCGGTCGTGCTCGAGACCCTCGGAAATATGCTTCGCCCT
CGTGTAGTTGCATACGTATGCCCCTCTTGATTCATGCGGTGCAGGTCCCA
AAAGAAAGTCAAAATCTCCGAAGTGTCACAGAGACTGAACAACTACTCGC
GTTTCTGTCTCTCACCGTTCACATCTTCATAGCTCCAACTCCTATGGCCA
ACTTCACAGGCGGTCGTCGTGTTTTCATTTCCGTCTGTACCTTTCACTTT
CGTCTGTACCTACCTACGTGACCGTCCGTTGTCGTGTGGATGTTCGTTGC
TGGGACGGGGCGCACGCAGGAATTTCAACGGGGGTGGTGGCTTGGGAGGG
GGTGGCGGAAACAACAAGGTGATAATTATTTATCTAAAAAGGAATCTTTC
TATATTCTCATAGAACACTCGCCGGGGGCGTTACGCGTTGTATGAGGTGC
AAGGTATTACTGTCTCATAGTTGTGCGTTACGTTTCTGGCTGTGCGAGCG
CGATGTGGGTTCGTGTCTGCAGATGATGAACTGACTGCAGCTACTGTCTT
GCGATTAGAAAGATGGCTGCCGTATGATAACAGGTGAAGGTGAAGCTGGT
GCTGTATTTGGTCGTGTCAGACGTCTCTCTTCTTTAGTCATGAAGAATAA
GCTATGGTGATAGAGGGGTAGTAAGAACCCCATCATCTTGATGAGTATAT
ACAGCAGAGATCTAAGGTTAGTTGCGTGACCTCGGCAGGGTACGATGGAG
TTGTTATCCTACTAGCTTCATAGAACTACTACCCCCTGTTTTCACAAAGA
AAGAGGGGGGTAGTAACCCCCCTCCCTCAACACCACTGCTACCGCTACCG
TTCGGCACTTACACTGAAGTCATGTTTCGCGAAACTATTGTGATGTGCTT
TCTTTCCAGTTCAACTTTGCCTCCTCCTCAGTCTAGTCTTGTCATGTATC
GTACTAATCTGCTCCACCTTGGCGTGGCATGCCAGGAGGAAGTCCCTGAG
GTCACTCATCGTCAGTCACCCACCCGCAAATAGGAAAGGCATACTTCTAT
TAGTATTTTCGTGTAATATACTTGCAGTCTTATTATTGGGAATAACTCCA
CCAGAATACTTTAAAAGAAGGATGCCCATTCTTCGCAAGACTGACGTTGG
AGGCAACCAACCTGGACAAGTTTCTCCCGTCGTGACACGCGAAGCTGGAG
ATGGCACGAAGTACGATCCACGTTTCAATATATTCTGGTTTGACCCAGGT
GGGACCCGATTCGGCTCCGTTTATTCCCCGACGATTTCCTTTTGAAGAGT
CGGTCAGGTTCTACTTGCACAGTGTTCACCCTTACAGACCAGCAAGGCCG
CATTTAAACATTTTTGGACGTGCGGTTTTGGACAGTCCCGCGTTGAAAAG
GGGGATGAGGGAGGGAGTACCGAATTTTGACGGTCATTATTGTTTTGACC
GGGTTAAGATCAAACCCCCATCTCGATAAACAACATACGAAAAATAGTAT
GGCGAGATCTCCATGTGTTTTGGTAATTAATACCAGTATGAATTTAGAAT
ACCTGATGACGCTAGGTGTAATAGGGCATCGAGTATTTTGACTATATTCA
CGTACGTTAAGGGCTGGTACAGGAGCCGGTCCGCCGTGTGCCTGATTTAG
AAGCTGTTCAGCTGAAGTACATACATTGTGTCCCTCGAGCTATGGCAGTC
AGCTGCATAGGGCAAACAGCATAATGCCGCACAGTTGCGCCCGGTCACAA
AACATTCAGACAGACAGTACCGTTGCATGCAACACCATATCTGCGGCACA
CAAGAGTTGGCAGGCACCCCCATATTTTCCCGAGATTTATATAGCGAACG
ATAGTCGCTGCGTGTGTGATGTCCTGTTATGAGTGACTGTATCCGCAGAC
ACAGCAGCACGCAGTCTGCCGGAGTCAGTCGTGGCAGTCGCAACATGGCA
ATATGACTGATATTTATCGTAGTTCGTAATTAGGTGTTGGGTTCCCTGGA
ACTAACTTATTTCTTCCTGTTTTTTTCCCAGGTTTATAAGGGGATTGATT
AAGTTAGCTTCCTCCCATGGTATTTTACTTGATTACCTTTCACCTGGTTT
GTCGGACCGTATCTCCGGTTTTTGCATCCATATTTCTCTCGACAAAAAAT
GGAGAAAAACTCCGTGACATATACATCTCAAAAGTCTGGTCAATACTCTC
AGAGGTGGGGTTTGATGAACACCATTGAGTCATTTTTTATTCGATTTATC
CGGATCATTTCAACAAAACAGAAGTCCGTGAAAGCCTCGGTATTGCTGAT
GCGCTCATCTCCTCAATAATTCATGTAAAAAATAGTCGGTTCCTCGCAGC
GGTAAACCGCGCGCGTCTTGCGGATTATAATCTACACTGAAGGAGTTGTC
GACTGTTTCGAAGAGTGGCGTGAAAGGCCACCGACCTGGACCGCGTTTGT
AAATTATTCTCGTTTGACGAGATTGGGACCCGATGGTTTGCTCAGCTGTT
TTCTTTCCCGAGAATTGTCCCATAGAGCAGAGTAGGTTTTGGTTCCTCCT
TTCACTTGTACAAGTTAGCTTGTAGTGCCACGCCATTCTTGTAGATTGTT
TTTCCTTTTTAAAGGACCAAGAGACTTGAGGCTGGATGCGCGCGGTGATA
CTCTCTGCTTTTCCATGTTCATCAGCATTATCATATATCGTACAACGGAC
TCCACCTTGTAGTGGCACGTCAGGAGAAAGCGTGGACATTGGCCATCCAT
AAGTGGGACAAGGCCTTCCATGTCTTGTAGCGTTGTATTGTCTGTTTCTC
GCTGGGGTCCTCGCAGTGATGAACACCGTGCGTAATAGTCCATTTGCACC
AAAAGGTAATGAAGGCTTTGTCTATTTTACCGCAAGACTGGCGTTGAAGG
CTACCACCTACCGAACTGTTTGGCTTTCTGCTTTCGTGACACGTAAAGCT
GGAGTATGCATGGATCTGTGACACGTTTGCTACGAGTATGTCATGGTTTG
ACCAGATGGGACTCGGGTTGTCTCCTTTCTGTCTACAGGATTATCCCATT
TAGGTTTCCACCATGATGTTTTGAGTAGCACACACCCATAGAACACACTT
CTCGATATGAAGTAGCACACAACCAAAGGAGCGAGGCTGGGTGATGTGGG
TGTGTGCTAGTTCGTATCGACCATCTACATTATCTGCTTGTAGAGGCTGT
ATTGGGTAAAGATCCGTGTTGTTATACAGGGGTCGGGTATACAAGAACCA
CTCGCGACCGACCGCATGTGGAGTATGATACGTACGAAGTGCGTTACTGT
CTCCCAAGATATGACTTTTTGTGTTACTGATCCAAATACAGGGTTTGGTT
CTTGTACCTTGGTATATATATCGCGGTGCACGTTCCGTGAAAGTCGAGCT
TCGAAAAAGTATTTCATCAACAGGTGCGGTGATATACCATACTTGATTGT
CCGAAAGGGGTTTTCTACAAAAGGTGCGGAAATGGTTCAAGTGCAACCTC
TATTCCCTAATGGTTTGCATCATTATGCGGGGGAACACACTTTCTATGTT
GTGTCTTTTTTTTTATTATGTTTTTGGGATACGAAGGTTCCTCCACTTGG
GGCATCCGAGGCGAGCGATGATGGGGAGAAGAAAAAGGCTGCCGGCCTCG
GTATCCTTTGGGCTGCCTATATCAGCCTCTTGGACACCCAGCCTCTCCTC
ACCAAGTCGCTCACGTCCATGACTGGGTTTGCCTTGGGTGACCTTTTGGC
GCAGAAATTCTTGGAGAAGAAGGTAAGCTACAGACACATTCGGGGTAAAG
ATCAGGAGAGCTCGGAGAATTTCCCCCGTTTCCGATAAATGCAGGAGTAT
GAGCGGATATTTCGCGCTTTATAATTTGTGTACTGAAGGTGTTACTCAAA
TGATCCATCCACGGAATGTATCCGAAGTATTATTTAGCGAAGTCTTGACA
ATATCGATTGCTCCATCAGACTCGAGGCATCGATTTTGCGGCGATAGTAG
CATCTATGCTCGTTTTTTTGTAAAGTGTTGACAAAACAGTTTTATCGTTA
CCCTGTCAAAACACCGCCCGCGTGATGAATAACCACCTTACCATGTCAAA
TTTCGATGATTTTTCGTTATTTTTGACTAGGCAAACGCAAACAGTGCTTT
TCCCGTCTGACGTTACGTATGCAAATATAACGAAACTACAAATTTACACC
TTGTAACACAAAAGATAAATCCAGAACAATTGAAACGCGTGTGGAGCATC
CAAGATTTGGATGACCGGCTGAAAACGATACTGCTAAGGAAGTGTGTAAC
GCTTCTCGAGCCAGACGTGACCTTTTTCGAGTTTCTTGTTTAGCTTTTTA
AAATGTATCCTTGTCTTTGGAAACCAGGAGGACCTTGACCTAGTCCGGCT
GATGAAGCTGGCTTCCTTCGGCGCCCTCGTGCACGGTTCAACTGGGCACT
TCTTCTACAACTTCCTGGACTCGAAGATCCCCGGTACTGCAGCCTTGACC
GTGGCGAAGAAGGTCTTCATTGACCAGGTACAAAATAGTACTGATATCAC
GTAAATTGTTCTCAAATGCGCGTAAGCGTGAGGCCAGTTCGAACTGGAGG
TATAAAAAAATGGTTCTAGACGGGTTTTTCCCAAACCGATTTAATATCGA
TTGACGCTGATTGCGCTGCTTCTTAACAGTATCCCTGTTGGTTGACGATG
CGACCGCTAAGATGATCTTTGATGTCTTGTCTGTGATCATTTTTCTTAAC
CCTGTAGTCGAGTGTCTTCTAAAAACGAATCTTCCCGGAAATCATTACTG
TCGTCAAAAAAAACTTGAAAAACACTAACGTTCTTGTGTTCTTGTGTGTT
GGTTCATTTTTTTTTTTTGTGTCTGCTGTATGTTGTATTTTTGCTTCTCC
TGTTCTCTTGCATTTTTTTCCGGGTATCTAAAAAAATAATTAGCCGCTTT
CAGCTTTTCATATTTTGACATGCCTGAATAAATAGGAAAACTATTTTGTC
ATGACACCTTTTTATTTATGCCATTCCCCCCCCCCCCCTATTAGGTAATG
TGGAACCCTGTATTCGGATGCATGTTCTTCGGGTACATGGGTGCGGTGGA
CGGCTTGGGCTTCACCGCAATCGGTGACAAGATCAAGAACAACCTCTGGA
CCTCCGTAAGTTCAGCGAAATAATTTTTTCTTCGGTTCGTGTGCCGTTGG
ATTTTTTCTTTTGCAATGGGGGAGGTTATATTTTATTATGTATGGTTTAG
TGTTTTTAATTGATTCATGTCTTTTGTTTGGTTGGGGGGGGGTAAATGCT
ATCGTTTTAGGGGATGTTTTTATTTGTAAGTTGTTAAATTGCCTTGAGAA
AAAATCTTAGAATTTATTTGGGGAATTTTAAACCATTGTATTAAGTTATA
CTCATTTTTTTTATTTCACTTCTAGGATAACGTGTAAGAATAATTTTATT
TTGATTTTTGAGCTGTAAAGCATAAATTTTGGGGGCTTTAAAATAACCTA
ATTTTGCTTTACTTTCTATTTTCCAATTTGTTGCTTTCCCCTATTGTCTT
TTGCCATCTGGTGCAAAGTTATATTTTATGGGAAAGATTCTGTGTTGTTT
CTATTCGGTCAAGTTTAAATGTACTGCGACCGATACCGTTGTTTACACAA
AAAAAGCCACCACGGCTGGTGAGCTTTTCAAGTGAAGTCTTTCTCAGGAA
GTGAGACCATGCCTTCATTGTTGAAGCAGCACGTCTAACCTAATGACATG
TGTTGGGGATATTTTCCTACCGATACAGCTTTTAGTTTCGCGAGTACCGC
AGTTGTCGTTGGGGTGATGTGATCCCGTGGAATTACGCTGATGTATCCCC
CGGAAATAACAGCGATCCCTTCCATTATCCGCACCGGTGCGATAGATCAA
ATGTATATATTCGAACAAATGGCGCTTCCGCGTAAATATTGAAAATCCAT
CACTCCAACTCTTGACTATGACCTCTGGCACAGCTTGTAACTGGTGATTG
AACTTTATTTTCTTTATTGCAGTCGTTGGCGCAGGAATGGCATCGTAATC
AAATCGTCGGTCTTTCGGGCACACAATACTTACTCATGACAGTATGAGCG
ATTCTCACGGTTATCGCAAAATCTTTCCTGACCAGCGTTGCCATCGAGAG
CTGAGTTTGTTGGAAACAAAAATGGTGTATCTGTCGGTACCTTTCCGTTG
AGTTTATTTGCCGGGGACTGTCCATCCCGCCCGCGTAGCGGTTGATAAAA
TTTGTTTTTGTACAGAGTACGGAATCGGATCGTATGGCCGTTGCAAGCGG
CAATCTGGTGGTGTAAAGCAACTCATCACATAATCTCCTTAGAAGCCGAA
AAGCTGCTGTATGTGACATGAAGATCAATGCACCATCTAATGGCCTCTTT
AGGTTACATTATTTATGGCTGTTTAAGCCTACTTCCAGGCAATCGCGGAA
CTTGATCTCCAGTACACGTACCGTAGTTCATGGGACTCCATCCACCGCTG
TTAATTGGTGGCACTTTTAGAAAAATTGAGTTTCTCAACAGTTACCGGAA
GTTCGGCCGCTGAAACGAAATCGTCGATATTTTTTTATAGGTGTGGTCTT
TTGAAAGAGTGGGGCCCTGCTTTTAAAAGTGAAATATAAATAGATGGAAG
TGTCATGTGGAGGTCATGTGTACTGTAGACGATGATATGGTCTGTTTTGT
GATGCCAGTGACATCGGTGCTGCACACGCCTAAAACGCACGAGGACTACC
CCTCTCCGCACATTCGCTTTCCTGCTTTTTGCCCTTTCCACGGGACGTGG
CGCGTCTGTTGCAACAAAAAACAGGTCAAGGGATCTTGGACTGTGTGGCC
TGTGGCTCACGCCATCAACTTCCGCTTCATTCCCACCTCGCAGAGGCTCC
TGTACATCAACACCATCCAGGTCTTCTACAACTGCTTCCTCAGCATCATT
TCGCAGAGGGATTAAGTAATTAAAATAACGCATGGGTGGCCATTTTGGGC
CACGTTTGTGTATTACGCTTGTTGA
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Coding sequence (CDS) from alignment at H-paniculata_contig8448:1804..9478-

>mRNA_H-paniculata_contig8448.16444.1 ID=mRNA_H-paniculata_contig8448.16444.1|Name=mRNA_H-paniculata_contig8448.16444.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1788bp|location=Sequence derived from alignment at H-paniculata_contig8448:1804..9478- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAAGTTCGCTACTGCTCTAGTTGGCGCGAGCGCCCTCTGTGCGACCGA
CGCTTTCGTCCCAAATGTGCGCGTTGGCAGCAGCTTTGGCCAGGCAGCTG
CGACTTCGCGAGTAGCGGTGGAGTCCGCACCAGAATCGCGCAGGAGCAGC
AATGTGGTGATGCTTTTGGGCGGAGGAGGGTCCAAGAATGGTGGCATCCC
GAAAACTGTGTCGTCGAAGATCGCCAACATCTTCCGAGGAACCAAGGGCA
GCAAGGGATGAAGTTCGCTACTGCTCTAGTTGGCGCGAGCGCCCTCTGTG
CGACCGACGCTTTCGTCCCAAATGTGCGCGTTGGCAGCAGCTTTGGCCAG
GCAGCTGCGACTTCGCGAGTAGCGGTGGAGTCCGCACCAGAATCGCGCAG
GAGCAGCAATGTGGTGATGCTTTTGGGCGGAGGAGGGTCCAAGAATGGTG
GCATCCCGAAAACTGTGTCGTCGAAGATCGCCAACATCTTCCGAGGAACC
AAGGGCAGCAAGGGGAATTTCAACGGGGGTGGTGGCTTGGGAGGGGGTGG
CGGAAACAACAAGGAATTTCAACGGGGGTGGTGGCTTGGGAGGGGGTGGC
GGAAACAACAAGGTTCCTCCACTTGGGGCATCCGAGGCGAGCGATGATGG
GGAGAAGAAAAAGGCTGCCGGCCTCGGTATCCTTTGGGCTGCCTATATCA
GCCTCTTGGACACCCAGCCTCTCCTCACCAAGTCGCTCACGTCCATGACT
GGGTTTGCCTTGGGTGACCTTTTGGCGCAGAAATTCTTGGAGAAGAAGGT
TCCTCCACTTGGGGCATCCGAGGCGAGCGATGATGGGGAGAAGAAAAAGG
CTGCCGGCCTCGGTATCCTTTGGGCTGCCTATATCAGCCTCTTGGACACC
CAGCCTCTCCTCACCAAGTCGCTCACGTCCATGACTGGGTTTGCCTTGGG
TGACCTTTTGGCGCAGAAATTCTTGGAGAAGAAGGAGGACCTTGACCTAG
TCCGGCTGATGAAGCTGGCTTCCTTCGGCGCCCTCGTGCACGGTTCAACT
GGGCACTTCTTCTACAACTTCCTGGACTCGAAGATCCCCGGTACTGCAGC
CTTGACCGTGGCGAAGAAGGTCTTCATTGACCAGGAGGACCTTGACCTAG
TCCGGCTGATGAAGCTGGCTTCCTTCGGCGCCCTCGTGCACGGTTCAACT
GGGCACTTCTTCTACAACTTCCTGGACTCGAAGATCCCCGGTACTGCAGC
CTTGACCGTGGCGAAGAAGGTCTTCATTGACCAGGTAATGTGGAACCCTG
TATTCGGATGCATGTTCTTCGGGTACATGGGTGCGGTGGACGGCTTGGGC
TTCACCGCAATCGGTGACAAGATCAAGAACAACCTCTGGACCTCCGTAAT
GTGGAACCCTGTATTCGGATGCATGTTCTTCGGGTACATGGGTGCGGTGG
ACGGCTTGGGCTTCACCGCAATCGGTGACAAGATCAAGAACAACCTCTGG
ACCTCCGTCAAGGGATCTTGGACTGTGTGGCCTGTGGCTCACGCCATCAA
CTTCCGCTTCATTCCCACCTCGCAGAGGCTCCTGTACATCAACACCATCC
AGGTCTTCTACAACTGCTTCCTCAGCATCATTTCGCAGAGGGATTAAGTC
AAGGGATCTTGGACTGTGTGGCCTGTGGCTCACGCCATCAACTTCCGCTT
CATTCCCACCTCGCAGAGGCTCCTGTACATCAACACCATCCAGGTCTTCT
ACAACTGCTTCCTCAGCATCATTTCGCAGAGGGATTAA
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