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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 1218 |
| Cds size | 993 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig8445.16443.1 >prot_H-paniculata_contig8445.16443.1 ID=prot_H-paniculata_contig8445.16443.1|Name=mRNA_H-paniculata_contig8445.16443.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=331bp
MARHNAAGDAGTETEKDKKYTSLNSTSSSVSTARRSGKPCSSSPQLAGKA
ATRTQQQQSLSAGEAETAVTAASLPTGVAGQNAEATGIGVGGPGGASMGS
SSLTHDNNINNNNTTHVSNTSSSQQQTTIMCDSSSSSTTSEQSYSTAQES
VHVATPPAAAVAAMTTAATPASPVRAANSIAPSPNTRRSESRTHSSPAHT
RTRSHAANPGGPFPPQVRGAATIAPAAAYASSPSPAGPATVGSNGSRPPI
SEAHNASTEISTHDAQTATVAAALKPVSPSPAVAPDAATPASDTGNLDDS
SQHHSSTNGTAPVTPGRGGRRVRGRGRMRSR back to topmRNA from alignment at H-paniculata_contig8445:7979..10220+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig8445.16443.1 ID=mRNA_H-paniculata_contig8445.16443.1|Name=mRNA_H-paniculata_contig8445.16443.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2242bp|location=Sequence derived from alignment at H-paniculata_contig8445:7979..10220+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AAATCTGCTCTGACACAAAGTATATGAGCACGTTAGCTTCGGAGCTGCCG
GCTTATATCCCAGTCAGCTCACGGAGTATGGGAGGACGGAAACCAGGATC
CGGCACTACAGGTATGGAGGAGATGCTCGCGGCCAAATTCGTGGCGATCT
AGTGGCGACGGAGTGTTAAAAAGTACAGTCGAAATCTGGAGAAAAACAGG
CAAGGGGGTGTTGTATTTTTTTTGTTTCGTCAAATTACGTCTCTTTGACC
AACACTTGTTGTTCGGTGGTTTTATGGACAGGGGGCATTGTGTGAAGTGT
GCTATTCAACGCCTGTGGCCAGTGCTGCGAGCTCAGCCTGTTTGGGTACG
TGTTCTTGCGTGTGCAGAGCAAGGGTGTGAAGTCTCACGCGAGTTCTGTA
ACGTCAGGGGTTGTTGTAAGCCAGTTTCGAGGCTAGGACTACACGCGGTG
GCTCTCTTGCCAAATGTTTGAGTTGACGCATCATTCCGCCTACCTCCTTT
TCTCCTTTTTTGTGCAGTCTAATGTCCAAATTACTCTGTGATCAACGTAC
ACAAAGCGCATGTAATACAATTAATACTGTCTATAGTGTGTGTAGTTGAC
CTGTGATTCATTTTTGATTGATTCTATGTGGGTGACCGCGTGACGGCGCG
TTTTTGCATCATCCGCTGTCTCCCCAAGTCACCAATTGAATTTGCATTTT
TATATTCCTGGGCAATCATCTATCTGTCTGTCGTCAGGTGCTGTTTTGGG
CTTGCCAGATTAGACGATGTCTCACCATTTTTTCCCCCTTAAGGAGTGTG
AGAGGGTCTGCCCATGATAGTCAGTGCAGTTTTACCATCCTTCCGTCCTT
CCCTGGACTCCTTGTAAGTGACCAGAGACTGTACTGTATCATATGTTCAT
ATTTTTGTAATGATTTCAAAAAACGGCGTAACTCCTAGAGCCATTGGAAC
CGGCGCTGGCAGGCCAGACCCTTGTAGGTACATAGATTGTCCCGATGAAT
CACGCTTAAGCAGCGTTTCTCTCTCGATGAGGCACCCTCTCGATTAGCAA
GGTGGAAGCAACAATTTCCAGGGCACAGCTACCCGCGGGGAGACTTATAT
CGCTCGGTGTGCCGTTTTATGCCATGCGCTCACAGAGGTCGGAAGGTGTT
CGTTCACCGCTCCGACGATAGAACAAGAGAGAGCAAATATCACACATCAC
TGTACGTGACAGACACTAGTGGCGAGCAGCTGTTAGGGCCCAGCAGCATA
TGGCGAGGCATAACGCTGCCGGCGACGCAGGGACGGAAACAGAGAAGGAC
AAAAAGTACACCAGCCTCAACAGCACTAGTAGTAGCGTCAGCACTGCCCG
CCGCTCCGGCAAACCTTGTTCCTCCTCGCCGCAATTGGCGGGGAAAGCGG
CAACACGTACGCAACAGCAACAATCGCTATCCGCGGGCGAAGCAGAGACG
GCGGTCACCGCAGCATCCCTGCCTACTGGTGTTGCTGGACAGAACGCGGA
GGCTACGGGAATAGGAGTAGGAGGACCAGGTGGCGCTAGTATGGGAAGCA
GTTCTCTTACGCACGACAACAATATCAACAACAATAACACGACGCACGTG
AGCAACACCAGCAGCAGTCAGCAACAAACCACTATCATGTGTGACAGTAG
TAGCAGTAGCACGACGTCTGAGCAGAGTTATTCCACAGCACAGGAGTCAG
TGCACGTGGCGACCCCTCCTGCGGCGGCAGTGGCGGCAATGACGACTGCG
GCGACCCCGGCAAGCCCTGTGCGGGCGGCTAATTCCATCGCACCGAGCCC
CAATACACGCAGATCGGAGAGTCGTACTCATTCTTCTCCGGCTCACACGC
GAACGCGATCGCATGCCGCAAACCCGGGTGGACCATTCCCACCGCAAGTA
CGAGGAGCGGCCACTATCGCTCCCGCCGCTGCCTATGCCTCTTCACCCTC
CCCAGCAGGACCGGCAACAGTCGGAAGCAACGGCAGCCGACCGCCGATAT
CCGAAGCACACAATGCCTCGACGGAAATCAGCACTCACGACGCACAAACG
GCGACCGTCGCTGCCGCTCTAAAGCCGGTATCACCGTCGCCGGCGGTCGC
TCCTGATGCTGCAACACCTGCTAGCGACACAGGAAACCTCGATGACTCCA
GCCAACATCACAGCAGCACGAACGGGACGGCGCCTGTAACACCAGGGAGG
GGCGGGCGGCGAGTGCGGGGAAGGGGTCGGATGCGATCACGG back to topCoding sequence (CDS) from alignment at H-paniculata_contig8445:7979..10220+ >mRNA_H-paniculata_contig8445.16443.1 ID=mRNA_H-paniculata_contig8445.16443.1|Name=mRNA_H-paniculata_contig8445.16443.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1986bp|location=Sequence derived from alignment at H-paniculata_contig8445:7979..10220+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCGAGGCATAACGCTGCCGGCGACGCAGGGACGGAAACAGAGAAGGA
CAAAAAGTACACCAGCCTCAACAGCACTAGTAGTAGCGTCAGCACTGCCC
GCCGCTCCGGCAAACCTTGTTCCTCCTCGCCGCAATTGGCGGGGAAAGCG
GCAACACGTACGCAACAGCAACAATCGCTATCCGCGGGCGAAGCAGAGAC
GGCGGTCACCGCAGCATCCCTGCCTACTGGTGTTGCTGGACAGAACGCGG
AGGCTACGGGAATAGGAGTAGGAGGACCAGGTGGCGCTAGTATGGGAAGC
AGTTCTCTTACGCACGACAACAATATCAACAACAATAACACGACGCACGT
GAGCAACACCAGCAGCAGTCAGCAACAAACCACTATCATGTGTGACAGTA
GTAGCAGTAGCACGACGTCTGAGCAGAGTTATTCCACAGCACAGGAGTCA
GTGCACGTGGCGACCCCTCCTGCGGCGGCAGTGGCGGCAATGACGACTGC
GGCGACCCCGGCAAGCCCTGTGCGGGCGGCTAATTCCATCGCACCGAGCC
CCAATACACGCAGATCGGAGAGTCGTACTCATTCTTCTCCGGCTCACACG
CGAACGCGATCGCATGCCGCAAACCCGGGTGGACCATTCCCACCGCAAGT
ACGAGGAGCGGCCACTATCGCTCCCGCCGCTGCCTATGCCTCTTCACCCT
CCCCAGCAGGACCGGCAACAGTCGGAAGCAACGGCAGCCGACCGCCGATA
TCCGAAGCACACAATGCCTCGACGGAAATCAGCACTCACGACGCACAAAC
GGCGACCGTCGCTGCCGCTCTAAAGCCGGTATCACCGTCGCCGGCGGTCG
CTCCTGATGCTGCAACACCTGCTAGCGACACAGGAAACCTCGATGACTCC
AGCCAACATCACAGCAGCACGAACGGGACGGCGCCTGTAACACCAGGGAG
GGGCGGGCGGCGAGTGCGGGGAAGGGGTCGGATGCGATCACGGATGGCGA
GGCATAACGCTGCCGGCGACGCAGGGACGGAAACAGAGAAGGACAAAAAG
TACACCAGCCTCAACAGCACTAGTAGTAGCGTCAGCACTGCCCGCCGCTC
CGGCAAACCTTGTTCCTCCTCGCCGCAATTGGCGGGGAAAGCGGCAACAC
GTACGCAACAGCAACAATCGCTATCCGCGGGCGAAGCAGAGACGGCGGTC
ACCGCAGCATCCCTGCCTACTGGTGTTGCTGGACAGAACGCGGAGGCTAC
GGGAATAGGAGTAGGAGGACCAGGTGGCGCTAGTATGGGAAGCAGTTCTC
TTACGCACGACAACAATATCAACAACAATAACACGACGCACGTGAGCAAC
ACCAGCAGCAGTCAGCAACAAACCACTATCATGTGTGACAGTAGTAGCAG
TAGCACGACGTCTGAGCAGAGTTATTCCACAGCACAGGAGTCAGTGCACG
TGGCGACCCCTCCTGCGGCGGCAGTGGCGGCAATGACGACTGCGGCGACC
CCGGCAAGCCCTGTGCGGGCGGCTAATTCCATCGCACCGAGCCCCAATAC
ACGCAGATCGGAGAGTCGTACTCATTCTTCTCCGGCTCACACGCGAACGC
GATCGCATGCCGCAAACCCGGGTGGACCATTCCCACCGCAAGTACGAGGA
GCGGCCACTATCGCTCCCGCCGCTGCCTATGCCTCTTCACCCTCCCCAGC
AGGACCGGCAACAGTCGGAAGCAACGGCAGCCGACCGCCGATATCCGAAG
CACACAATGCCTCGACGGAAATCAGCACTCACGACGCACAAACGGCGACC
GTCGCTGCCGCTCTAAAGCCGGTATCACCGTCGCCGGCGGTCGCTCCTGA
TGCTGCAACACCTGCTAGCGACACAGGAAACCTCGATGACTCCAGCCAAC
ATCACAGCAGCACGAACGGGACGGCGCCTGTAACACCAGGGAGGGGCGGG
CGGCGAGTGCGGGGAAGGGGTCGGATGCGATCACGG back to top
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