prot_H-paniculata_contig8445.16442.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig8445.16442.1
Unique Nameprot_H-paniculata_contig8445.16442.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length156
Homology
BLAST of mRNA_H-paniculata_contig8445.16442.1 vs. uniprot
Match: A0A6H5L132_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L132_9PHAE)

HSP 1 Score: 76.6 bits (187), Expect = 3.050e-14
Identity = 39/68 (57.35%), Postives = 48/68 (70.59%), Query Frame = 0
Query:   61 QVEDLVERDIDGVWFPAKVVAVREA---GVGKSEAGTRAATSRLSYDLMYLDDNNRECEVSREDIKLV 125
            +V ++VERDIDGVWFPAKVVAV E     V    +G+     +L+YDL YLDDNNRE EV  EDI++V
Sbjct:   26 RVGEVVERDIDGVWFPAKVVAVHEKKDEAVPSGGSGSIGRRRQLAYDLFYLDDNNRESEVPEEDIRVV 93          
BLAST of mRNA_H-paniculata_contig8445.16442.1 vs. uniprot
Match: D8LHB0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHB0_ECTSI)

HSP 1 Score: 65.1 bits (157), Expect = 1.890e-10
Identity = 33/64 (51.56%), Postives = 43/64 (67.19%), Query Frame = 0
Query:   61 QVEDLVERDIDGVWFPAKVVAVREAGVGKSEAGTRAATSR---LSYDLMYLDDNNRECEVSRED 121
            +V ++VERDIDGVWFPA+VV V E       +G+  +  R   L+YDL+YLDDNNRE E   +D
Sbjct:   21 RVGEVVERDIDGVWFPAQVVGVHEKTYEAGRSGSSGSIGRPWQLAYDLVYLDDNNRESEGEGKD 84          
BLAST of mRNA_H-paniculata_contig8445.16442.1 vs. uniprot
Match: A0A835Z3A3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3A3_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 1.810e-7
Identity = 29/67 (43.28%), Postives = 40/67 (59.70%), Query Frame = 0
Query:   62 VEDLVERDIDGVWFPAKVVAVREAGVGKSEAGTRAATSRLSYDLMYLDDNNRECEVSREDIKLVQRA 128
            V  +VERDID +W+PA+V+AVRE   G        A     YD+ YLDD N E +V+  D++L+  A
Sbjct:   39 VGSVVERDIDAIWYPAEVLAVREDACG--------AAGAYVYDIAYLDDGNTEHDVAARDLRLLDGA 97          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8445.16442.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5L132_9PHAE3.050e-1457.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LHB0_ECTSI1.890e-1051.56Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z3A3_9STRA1.810e-743.28Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8445contigH-paniculata_contig8445:998..2004 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8445.16442.1mRNA_H-paniculata_contig8445.16442.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig8445 998..2134 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig8445.16442.1 ID=prot_H-paniculata_contig8445.16442.1|Name=mRNA_H-paniculata_contig8445.16442.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=156bp
MCLTHRGCRSRKPLGDLPAIIVVSASHSRTDSTHGRCRGTDNSVNPHEMR
GENDSGGSRVQVEDLVERDIDGVWFPAKVVAVREAGVGKSEAGTRAATSR
LSYDLMYLDDNNRECEVSREDIKLVQRAYNLDGNLEKDERGAGVGGDGGN
EQLVGV
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