mRNA_H-paniculata_contig844.16437.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig844.16437.1 vs. uniprot
Match: D7FKW9_ECTSI (Similar to Ubiquitin carboxyl-terminal hydrolase 15 (Ubiquitin thiolesterase 15) (Ubiquitin-specific processing protease 15) (Deubiquitinating enzyme 15) (Unph-2) (Unph4) isoform 11 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKW9_ECTSI) HSP 1 Score: 1453 bits (3761), Expect = 0.000e+0 Identity = 872/1641 (53.14%), Postives = 1030/1641 (62.77%), Query Frame = 1
Query: 193 MGCCSSSQTQPPAGRGAFPAPLPPPMQDNMNELLNRWRHGEVNLLQRRFRLARTQSVKPTMAAKLRSSLVPPSSGSVTATSVATSNNRDNSV--GEDGSTSPLSGEDAEVG----GGEQRKQAAEGTLAMLGVNGGXXXXXXXXXXXXXXXSSRAGMDKEAFFRVFPEVQSLPTDVQKSAFGLFDCVGRGALDFRNFCRALALCCRGSRVERLRFLFDLFSGASQTKYYGTGADTGPKDAPLTALGGAAAVLSEAELGVLKKHLGFSPADADPLPFQTRASKAAGAVVQSVGEGNPVSKGLQLLEYFEWAEIFISDEALDKALRPFYLLPSPQQEKDKKVLAHLAEHHMQEGQWMCLVATPWWAYWCTYAGLTAEDLERVPERFALGLTEAAEINASQLASATARTVGAASGQSSVAKTKVAAATVGTSGSNERTVASGDSTVAYGA-SGYVDANGYGGQLESVRV--KDREVPAVLARRPHEMDNSILQGGAEWEVAPDQEPGLHYVLLPKLVWDVMVDWYGGGPVFCRQVVRVTSSTSQTGLPRPATADEGEFHGGTLAGSLTVDLYPLALHVNLCDASGRAGGRERLVLTSHYVTVEDMLEDILASPRLGGLQRGMTSGRALPIPDQDGASRDGHGRVRGGRDKGNDDEKDKGHSGDRSQATGDALAENADDEALRSR-----LWVLEISPSGLTDTPRAHHASAA-GVCRPRFSFVGGGMMGGIDPQAGISRWKMVKPDEEHMTLSELGLYGGEKVMIETKSGDGVWPRHRYIEEPGFRHFREGARVDAMDYQGRWFRGQVVEMQFRSSSRIIDSEGPVGRKTKASFYLYAHELALAGAIQENGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVHFDRFAPQWDEWYDSKSLKLAPEISYTAPVVPAQAVLKAREREEGAAEAEGEEDLSPNPPSNKSGAQSNTSSNSSRPGNGAYQPPVARFPGENGQWNSQQHPRAVGYGTPRSHGNGN-ADGLSNNVGGALNRRSNTPGRPPVAGACGLVNLGNTCYLNSAVQCLSHTPLMRAYLLSDMWAAEVNKYNPLGTQGKLVEDFAQLLKSLWSQEFLCMYPRKFKQGLVKYKPQFSGNEQQDSQEFLAEMLDALHEDVNRVIDKPYVAAPDDDE-ADSGKSDQLLADEAWDRHVQRNRSVIVDLFQGQLKMECRCQDCGRKSVTFDPFMYLSVPIPIRNEKMVAVVLLPRIRTRDIV-GSGTGGNAGEHGADGEAMEFSNPRQLVPVRYRMMLPRLGEARALCACLSALCGLSPSSLVVSLMQQPTGRVLDDREPLNAVRDGDFILAFAVVSENELGKKIRKKKRAMLYCFFSPVPDAATVRTVLPAAGELGTTASAEQAHGGEQSLPVVNMS--AQVGNGTRYS-APKTVLGVDAG---TVHKAPDANANLAEEGTGMGIMVGRAATGGDTEXXXXXXXXXXXXINGGYGTEDEADTDLDDDRPPTCKVDRRSPDERCMGTFPSRLQDMEIGWRLDARDTKGDWFPATVVEVGKRXXXXXXXXXXXXXXXXXXXXRSSKR-TELLLKVHFDDYTSRWDEQYGEPEWKEEKLAPLYSKARQ*ESSLIYP 5040
MGCCSS QPP+G FP PLP PMQDNMNELLNRWRHGEVNLLQR FRL R Q+VK T+A+K+ SL PSS S TATS ATS NRD S GEDGS SP S + A G++ A G +G G +RAGMDKEAF RVFP+VQ LP +VQ+SAF LFDCVGRG+LDFRNFCRALALCCRGSR ERLRFLFDLFSGASQ K+YGTGAD G +DA +A G A LS+AEL LKK LG S DA+ FQ K +G GL L EYFEWAE+ SDEALD+ALRPFYLLPSPQQEKDK VLAHL E+ ++E Q MCLVA+PWW+YW YA LT ED+ RVPER ALGL + + A A T+GA G +V V GD + G +G A G +E + K+R VP LARRPHE+DNS LQGGAEWEVAP+ + G YV+LPK +WDVMVDWYGGGPVF RQVV V+S+ LP A + L VDLYPLALHV++CD +GR GGRERLVLTSH+V V DML D+L S RL G+ RG++ A IP +D N D + + GD D + ++R LWVLEIS SGL DTPR H S+A G CRPRFS+ GG +GG+DPQ+G+ RW++VK +EE MTLS LGL GGEKVM+E K+ DG W R +YIE PGFR FRE RVDAMDYQGRWFRGQVVE+ +SSS+I+DSEGPVGRK + ++E + XXXXXXXXX VHFDRFAPQWDEWYDSKSLKLAPE S+TAP VPA L R EG + E EE+ SP+ + + G + S SS+PG + PPV RFPG+ N A PR++G G+ ADG+SN GGALNRRSNTPG+PPV GACGLVN+GNTCYLNSAVQCLSHTPL+RAYLLSDMWAAEVNKYNPLGTQGKLVEDFA LLKSLWSQE+LC++P KFK+GL+KYKPQF+GNEQQDSQEFLAEMLDALHEDVNRVIDKPYVAAPDDD+ A+SG+SDQ LADEAWDRHVQRNRSVIVDLFQGQLKMECRC C +KSVTFDPFMYLSVPIP+RNEKMVAVV+LPRIRTR +V SG G G +DG +FSNPRQLVPV+Y MMLPRLGE L LS LCG+ S+VV+++QQ +V+ D+E L +RD +++A + E L ++ + A SPVP + P A A E+ LPV + + N T + AP V+ V+ G T K A AEEG G+ + E + G E+ +TDLD+DRPPT D R+PDERCM +FP+RL+D+EIGWRLDA D +G W+ ATVVE+ R KR TE L++VHFD +TSRWDE YGE EW+E+KL PL++K R+ E + P
Sbjct: 1 MGCCSSQPAQPPSG--GFPTPLPAPMQDNMNELLNRWRHGEVNLLQRSFRLGRAQAVKHTIASKMFGSLAAPSSNSGTATSAATSANRDRSASFGEDGSASPASRDGAATATAELDGKKPGDGATGGPLKVGAGSGEGGQVVSLGDSG---GARAGMDKEAFLRVFPDVQGLPVEVQRSAFLLFDCVGRGSLDFRNFCRALALCCRGSREERLRFLFDLFSGASQPKHYGTGADGGARDAS-SASGATTARLSDAELVGLKKQLGLSAGDANHAHFQ----KTSGV------------SGLLLSEYFEWAELHASDEALDRALRPFYLLPSPQQEKDK-VLAHLMEYAIEEAQCMCLVASPWWSYWSNYAALTKEDVLRVPERTALGLDKTPGYLDQRPADEPAVTLGAEGGDVAVRPGDVV----------------GDGVASMGVGNGNGHAQGESPAMERLAGAGKERAVPTTLARRPHEIDNSSLQGGAEWEVAPNLDLGEDYVMLPKSLWDVMVDWYGGGPVFARQVVNVSSNLE---LPEKARGGGDDAEAEPSTARLAVDLYPLALHVSMCDPAGRPGGRERLVLTSHHVHVRDMLADVLDSSRLQGMSRGLSM-TAATIPQEDPVLE-------------NADVVQEQRLSEEGDVVGDGETPLRRDVSSQNRTGQVRLWVLEISTSGLIDTPRVHAPSSAPGFCRPRFSYGGGRELGGVDPQSGLDRWRLVKTEEEGMTLSALGLIGGEKVMVENKNPDGKWQRRKYIESPGFRQFRENDRVDAMDYQGRWFRGQVVEVGSKSSSKIVDSEGPVGRKKSNRRQRLELDPPTEEPVREGANQEVEHLEPGDASDRNEGRSAAKAGAGRSXXXXXXXXXRSSGKERDGGVGGKEGPRQGGPSRRRLRVRVHFDRFAPQWDEWYDSKSLKLAPEFSHTAPAVPAPPAL--RPTNEGNGDTEAEEEASPDATAIRGGVGAPAPS-SSKPGGNTFPPPVGRFPGDASNGNGWG---ARSQSMPRTNGTGSTADGISNYGGGALNRRSNTPGKPPVPGACGLVNVGNTCYLNSAVQCLSHTPLVRAYLLSDMWAAEVNKYNPLGTQGKLVEDFASLLKSLWSQEYLCIFPSKFKRGLIKYKPQFAGNEQQDSQEFLAEMLDALHEDVNRVIDKPYVAAPDDDDDAESGRSDQDLADEAWDRHVQRNRSVIVDLFQGQLKMECRCTVCNKKSVTFDPFMYLSVPIPVRNEKMVAVVMLPRIRTRYLVRSSGLNGEDGAMASDGGGAQFSNPRQLVPVQYGMMLPRLGELSDLKRALSDLCGIPTVSIVVAILQQNQIKVMQDKELLTELRDDTWVVALEMQGEINLNRRAKPSTSASRQATVSPVPTPTSSGPTKPEAATAAGXXXXXXAALSEEELPVGTEAEPTEPSNTTSGTPAPNVVVPVENGGSTTAAKGEGGAAESAEEGQGVSPEPLKETL---KEGLGVPETAAAEARSDGSEDEEAEETDLDNDRPPTSTPDNRTPDERCMSSFPTRLRDLEIGWRLDALDGQGGWYAATVVEINPRAKALDRGGDKPSKASLSGKGEDQKRKTEYLVRVHFDAFTSRWDESYGEQEWREKKLQPLFTKTRRQERTNDIP 1576
BLAST of mRNA_H-paniculata_contig844.16437.1 vs. uniprot
Match: F0YH03_AURAN (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YH03_AURAN) HSP 1 Score: 281 bits (720), Expect = 5.800e-76 Identity = 149/306 (48.69%), Postives = 207/306 (67.65%), Query Frame = 1
Query: 3304 PGRPPVAGACGLVNLGNTCYLNSAVQCLSHTPLMRAYLLSDMWAAEVNKYNPLGTQGKLVEDFAQLLKSLWSQEFLCMYPRKFKQGLVKYKPQFSGNEQQDSQEFLAEMLDALHEDVNRVIDKPYVAAPDDDEADSGKSDQLLADEAWDRHVQRNRSVIVDLFQGQLKMECRCQDCGRKSVTFDPFMYLSVPIPIRNEKMVAVVLLPRIRTRDIVGSGTGGNAGEHGADGEAMEFSNPRQLVPVRYRMMLPRLGEARALCACLSALCGLSPSSLVVS-LMQQPTGRVLDDREPLNAVRDGDFILAF 4218
PG + GA GLVNLGNTC++NSA+QCLSHTPL+RAY+LS+ +AAE+N+ NPLG+QG++V++FA +L+ LWS + + P KFK+ L + KPQF+GN+QQDSQEFL EMLD LHEDVNRV++KPYV PDDD+ + + ++ A +AWDR++ RNRSVIVDLFQGQLK E +C CG+KSV F+PFM+LSVP+P EK + +H A + + +QL + + +PRLGE L + LS + G+ + + V + + R+L+D EPL AVRD D ++A+
Sbjct: 77 PGARDLPGATGLVNLGNTCFMNSALQCLSHTPLLRAYVLSEQFAAEINRANPLGSQGRMVDEFANVLRMLWSDRYRSVAPSKFKRALARAKPQFAGNDQQDSQEFLNEMLDVLHEDVNRVVEKPYVEEPDDDDV-AKLTYEVAARDAWDRYLLRNRSVIVDLFQGQLKSEKQCCACGKKSVKFEPFMHLSVPLPSTQEKRL-----------------------KHAA---SKKRPGEKQLRAAIFGVSVPRLGEVGDLKSALSEVTGVPRADIAVGDVYRHRFARILEDDEPLAAVRDDDVVVAY 355
BLAST of mRNA_H-paniculata_contig844.16437.1 vs. uniprot
Match: A0A836CCM1_9STRA (USP domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCM1_9STRA) HSP 1 Score: 272 bits (695), Expect = 1.460e-74 Identity = 208/615 (33.82%), Postives = 289/615 (46.99%), Query Frame = 1
Query: 3349 GNTCYLNSAVQCLSHTPLMRAYLLSDMWAAEVNKYNPLGTQGKLVEDFAQLLKSLWSQEFLCMYPRKFKQGLVKYKPQFSGNEQQDSQEFLAEMLDALHE-----------------------------------------------DVNRVIDKPYVAAPDDDEADSGKSDQLLADEAWDRHVQRNRSVIVDLFQGQLKMECRCQDCGRKSVTFDPFMYLSVPIPIRNEKMVAVVLLPRIRTRDIVGSGTGGNAGEHGADGEAMEFSNPRQLVPVRYRMMLPRLGEARALCACLSALCGLSPSSLVVS-LMQQPTGRVLDDREPLNAVRDGDFILAFAVVSENELGKKIRKKKR-AMLYCFFSPVPDAATV-----RTVLPAAGELGTTASAEQAHGGEQSLPVVNMSAQVGNGTRYSAPKTVLGVDAGTVHKAPDANANL-AEEGTGMGIMVGRAATGGDTEXXXXXXXXXXXXINGGYGTEDEADTDLDDDRPPTCKVDRRSPDERCM-----------GTFPSRLQDMEIGWRLDARDTKGDWFPATVVEVGKRXXXXXXXXXXXXXXXXXXXXRSSKRTELLLKVHFDDYTSRWDEQYGEPEWKEEKLAP 4995
GN+CYLNSA+QCLSHTP++RAYLLS M +EVN NPLGTQG+LVE+ + LL+ LWS ++LC+ P KFK+ L ++K QF+G +QQD QEFLA +LDALHE DVNRV+ KPYV APDD + + AD AW+RHV RNRSVIVDLFQGQLKMEC+C +CG+ SV+FDPFM+LSVPIP R++K VAV+L+ R+R RD V E P PVR+ LPRL + AL A L+ + GL +L ++ + + +V D L +R+ DF++A+ K R K+ A +P P + + LP A+A Q+ GG P P+ + G + A++ L A G + + ++A+G D Y + + TD++D+ +P+ + G RLDA D++G W+ TV E+ ++R +VHFDD+ +RWDE + W E KLAP
Sbjct: 20 GNSCYLNSALQCLSHTPMLRAYLLSSMARSEVNVSNPLGTQGQLVEELSALLQQLWSGDYLCVLPVKFKRSLARHKSQFAGTDQQDGQEFLAVILDALHERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDRQEXXXXXXXXXXXDVNRVLTKPYVPAPDDAVLATMAEPEKAAD-AWNRHVLRNRSVIVDLFQGQLKMECKCSECGKSSVSFDPFMFLSVPIPPRDDKFVAVLLVRRMRHRDSV------------------EQYVPSS--PVRFGFTLPRLSQVGALLAALAEVAGLDSQALALADVFRGQCVKVYDAEASLAVIREEDFLVAYE--------KTWRAKETPAQPSKGGAPSPPSGLLPLKLQALPLPWCSVAAVGAAAAQSAGG---APXXXXXXXXXXXXXXXXPQLLAG--------SRGASSTLKASSPVGKSLFL-QSASGSD------------------YASSHGSFTDVEDETEANXXXXXXXXXXXXXXXXXXXXXXXXAAWPTSFAGIRAGLRLDALDSRGTWYSGTVAELD--------------------GVGEARRA----RVHFDDFDARWDEGFDAAAWGEGKLAP 551
BLAST of mRNA_H-paniculata_contig844.16437.1 vs. uniprot
Match: A0A7S3JRX2_9STRA (Hypothetical protein n=2 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JRX2_9STRA) HSP 1 Score: 268 bits (684), Expect = 2.130e-68 Identity = 187/503 (37.18%), Postives = 261/503 (51.89%), Query Frame = 1
Query: 2896 VHFDRFAPQWDEWYDSKSLKLAPEISYTAPVVPAQAVLKAREREEGA-AEAEGEEDLSPNPPSNKSGAQSNTSSNSSRPGNGAYQPPVARFPGENGQWNSQQHPRAVGYGTPRSHGNGNADGLSNNVGGALNRRSNTP--GRPPVAGACGLVNLGNTCYLNSAVQCLSHTPLMRAYLLSDMWAAEVNKYNPLGTQGKLVEDFAQLLKSLWSQEFLCMYPRKFKQGLVKYKPQFSGNEQQDSQEFLAEMLDALHEDVNRVIDKPYVAAPDDDEADSGKSDQLLADEAWDRHVQRNRSVIVDLFQGQLKMECRCQDCGRKSVTFDPFMYLSVPIPIRNEKMVAVVLLPRI-----------------------------------RTRDIVGSGTGGNAG------------EHGADGEAMEFSN----PRQLVP--VRYRMMLPRLGEARALCACLSALCGLSPSSLVVS-LMQQPTGRVLDDREPLNAVRDGDFILAFAVVSE 4233
V FD F P+WDEWYD S LAP L R +E A + +G SP P KS + ++ S + ++G+ N +GL + G + R N + + G+ GLVNLGNTCY+NSA+QCLSHTPL+RAY+LS+ ++ EVN+ NPLGTQG++VE+FA +LK LWS+++ + P KFK+ L K KPQF+GN+Q DSQEFLAEMLD LHEDVNRV++KPYV PDDDE D S A EAWDR++ RNRSVIVDLFQGQL E C C ++S+ F+ FMYLSVP+P +++V +VLL R +T +I S + E + +++ + P+ +VP V+Y +PRLG L ++ G++ S LV+ + + ++ D EPL + D DF++A+ E
Sbjct: 721 VRFDHFHPKWDEWYDVSSSGLAP--------------LGTRANQEQANSRKDGIPANSPLPMIKKSLSTDSSESTA-----------------QSGRTNQN-------------------NGLDESNKGGIQRSKNKELAVKDVLPGSTGLVNLGNTCYINSALQCLSHTPLLRAYILSEGYSGEVNRTNPLGTQGRMVEEFASILKQLWSEQYRYIAPNKFKRTLAKLKPQFAGNDQHDSQEFLAEMLDMLHEDVNRVVEKPYVVEPDDDEVDKLTSIDA-AREAWDRYLLRNRSVIVDLFQGQLMSERTCAVCSKRSLKFETFMYLSVPLPAPRDRLVKLVLLTRAEGSKLDLSRLEVPTNRPASTAISVDMPPDNGAISDKTTEINASKIEKRSSWSAMLSKPIEKNETSEEDKSIALNGALLQPKLVVPRVVKYVFEIPRLGTVAELKKAIAKRSGIAASDLVIGDVFRHRFIKLWHDTEPLARMADEDFLVAYESTPE 1172
BLAST of mRNA_H-paniculata_contig844.16437.1 vs. uniprot
Match: A0A7S3Y0Z1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y0Z1_HETAK) HSP 1 Score: 221 bits (562), Expect = 1.620e-61 Identity = 125/248 (50.40%), Postives = 159/248 (64.11%), Query Frame = 1
Query: 3478 LVEDFAQLLKSLWSQEFLCMYPRKFKQGLVKYKPQFSGNEQQDSQEFLAEMLDALHEDVNRVIDKPYVAAPDDDEADSGKSDQLLADEAWDRHVQRNRSVIVDLFQGQLKMECRCQDCGRKSVTFDPFMYLSVPIPIRNEKMVAVVLLPRIRTRDIVGSGTGGNAGEHGADGEAMEFSNPRQLVPVRYRMMLPRLGEARALCACLSALCGLSPSSL-VVSLMQQPTGRVLDDREPLNAVRDGDFILAF 4218
+VE+FA LL LWS +FLC+ P +F + L K K QF GNEQQD+QEFLAEMLDALHEDVNRV+ KP V A +D E + GKSD+ L+ W+RH+ RNRSVIVDLFQGQLK+E C C ++SV FDPFMYLSVPIP + +K V V L+ R+R GA EA L+P RY ++LPRLGE L LSALCG+ L + + + +V D EPL +R+ D ++A+
Sbjct: 1 MVEEFAGLLAQLWSGDFLCVLPARFCRALAKCKTQFGGNEQQDAQEFLAEMLDALHEDVNRVLRKPAVPALEDHEVE-GKSDRALSRLFWERHLLRNRSVIVDLFQGQLKVEVTCPHCRKRSVNFDPFMYLSVPIPSQGDKAVEVTLIRRVR---------------RGAPPEA--------LMPTRYGLLLPRLGEIADLKKALSALCGVPKEQLSITDVYRHKFHKVFSDSEPLALLREDDVLVAY 224
BLAST of mRNA_H-paniculata_contig844.16437.1 vs. uniprot
Match: UPI000854F5AC (LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase 4-like n=1 Tax=Nanorana parkeri TaxID=125878 RepID=UPI000854F5AC) HSP 1 Score: 223 bits (567), Expect = 1.500e-59 Identity = 116/270 (42.96%), Postives = 167/270 (61.85%), Query Frame = 1
Query: 3325 GACGLVNLGNTCYLNSAVQCLSHTPLMRAYLLSDMWAAEVNKYNPLGTQGKLVEDFAQLLKSLWSQEFLCMYPRKFKQGLVKYKPQFSGNEQQDSQEFLAEMLDALHEDVNRVIDKPYVAAPDDDEADSGKSDQLLADEAWDRHVQRNRSVIVDLFQGQLKMECRCQDCGRKSVTFDPFMYLSVPIPIRNEKMVAVVLLPRIRTRDIVGSGTGGNAGEHGADGEAMEFSNPRQLVPVRYRMMLPRLGEARALCACLSALCGLSPSSLVVS 4134
G CGL NLGNTC++NSA+QCLS+TP + Y LSD + E+NK NPLG +G++ +A+L++ +WS E + PR FK + ++ PQFSG +QQDSQE LA +LD LHED+NRV KPY+ D D G+ D ++A EAWD H++RN S+IVD+F G K C +C + SVTFDPF YL++P+P+R ++ + V L+ S+P Q P +YR+++P++G LCA LS L + ++VV+
Sbjct: 19 GLCGLSNLGNTCFMNSALQCLSNTPPLTEYFLSDDYKEEINKENPLGMKGEIAMAYAELIRQIWSGEHSYVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLELKDAD----GRPDSVVAKEAWDNHLRRNYSIIVDIFHGLFKSTLVCPECAKVSVTFDPFCYLTLPLPMRKDRTMEVFLVR----------------------------SDP-QCKPTQYRLVVPKMGAVSDLCAALSKLSDVPAENMVVT 255
BLAST of mRNA_H-paniculata_contig844.16437.1 vs. uniprot
Match: A0A8C9GLB3_9PRIM (USP domain-containing protein n=1 Tax=Piliocolobus tephrosceles TaxID=591936 RepID=A0A8C9GLB3_9PRIM) HSP 1 Score: 219 bits (559), Expect = 2.470e-59 Identity = 122/310 (39.35%), Postives = 178/310 (57.42%), Query Frame = 1
Query: 3325 GACGLVNLGNTCYLNSAVQCLSHTPLMRAYLLSDMWAAEVNKYNPLGTQGKLVEDFAQLLKSLWSQEFLCMYPRKFKQGLVKYKPQFSGNEQQDSQEFLAEMLDALHEDVNRVIDKPYVAAPDDDEADSGKSDQLLADEAWDRHVQRNRSVIVDLFQGQLKMECRCQDCGRKSVTFDPFMYLSVPIPIRNEKMVAVVLLPRIRTRDIVGSGTGGNAGEHGADGEAMEFSNPRQLVPVRYRMMLPRLGEARALCACLSALCGLSPSSLVVS-LMQQPTGRVLDDREPLNAVRDGDFILAFAVVSENELGKK 4251
G CGL NLGNTC++NSA+QCLS+T + Y L D + AE+N+ NPLG +G++ E +A+L+K +WS + PR FK + ++ PQFSG +QQDSQE LA +LD LHED+NRV KPY+ D +G+ D ++A EAW+ H RN SVIVD F G K C +C + SVTFDPF YL++P+P++ ++++ V L+P AD P +YR+ +P +G LC LS LCG++ ++VV+ + ++ E LN + D I + V S + G +
Sbjct: 35 GLCGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQMWSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLELKDA----NGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLTLPLPLKKDRVMEVFLVP--------------------ADPHCR---------PTQYRVTVPLMGAVSDLCEALSRLCGIAAENMVVADVYNHRFHKIFQMDEGLNHIMPRDDIFVYQVCSTSVDGSE 311
BLAST of mRNA_H-paniculata_contig844.16437.1 vs. uniprot
Match: A0A8C5RKK1_LATLA (USP domain-containing protein n=1 Tax=Laticauda laticaudata TaxID=8630 RepID=A0A8C5RKK1_LATLA) HSP 1 Score: 219 bits (557), Expect = 2.800e-59 Identity = 118/324 (36.42%), Postives = 186/324 (57.41%), Query Frame = 1
Query: 3325 GACGLVNLGNTCYLNSAVQCLSHTPLMRAYLLSDMWAAEVNKYNPLGTQGKLVEDFAQLLKSLWSQEFLCMYPRKFKQGLVKYKPQFSGNEQQDSQEFLAEMLDALHEDVNRVIDKPYVAAPDDDEADSGKSDQLLADEAWDRHVQRNRSVIVDLFQGQLKMECRCQDCGRKSVTFDPFMYLSVPIPIRNEKMVAVVLLPRIRTRDIVGSGTGGNAGEHGADGEAMEFSNPRQLVPVRYRMMLPRLGEARALCACLSALCGLSPSSLVVS-LMQQPTGRVLDDREPLNAVRDGDFILAFAVVSENELGKKIRKKKRAMLYCFFS 4293
G CGL NLGNTC++NSA+QCLS+TP + Y L+D + E+N NPLG +G++ + +A+L+K +WS ++ + PR FK + ++ PQFSG +QQD QE LA +LD LHED+NR+ KPY+ D D G+ D+++A+EAW+ H++RN S+IVD+F G K C +C + SVTFDPF YL++P+P++ E+ + V L+ S P Q Y++++P++G + LC LS L G++ ++V+ + R+ E L ++ + D I + + +R+K R Y S
Sbjct: 30 GLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNYDNPLGMRGEIAKSYAELIKQMWSGKYSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKDAD----GRPDKIVAEEAWENHLKRNDSIIVDIFHGLFKSTLVCPECAKISVTFDPFCYLTLPLPMKKERSLEVYLV------------------------RLDPLSKPMQ-----YKVVVPKIGNIQDLCIALSTLSGVAADKMIVTDIYNHRFHRIFAMDENLTSIMERDDIYVTEDTEQVVIPVCLREKFRHSGYSHHS 320
BLAST of mRNA_H-paniculata_contig844.16437.1 vs. uniprot
Match: A0A2G9RJ31_LITCT (Ubiquitinyl hydrolase 1 (Fragment) n=2 Tax=Lithobates catesbeianus TaxID=8400 RepID=A0A2G9RJ31_LITCT) HSP 1 Score: 222 bits (565), Expect = 7.650e-59 Identity = 119/303 (39.27%), Postives = 179/303 (59.08%), Query Frame = 1
Query: 3325 GACGLVNLGNTCYLNSAVQCLSHTPLMRAYLLSDMWAAEVNKYNPLGTQGKLVEDFAQLLKSLWSQEFLCMYPRKFKQGLVKYKPQFSGNEQQDSQEFLAEMLDALHEDVNRVIDKPYVAAPDDDEADSGKSDQLLADEAWDRHVQRNRSVIVDLFQGQLKMECRCQDCGRKSVTFDPFMYLSVPIPIRNEKMVAVVLLPRIRTRDIVGSGTGGNAGEHGADGEAMEFSNPRQLVPVRYRMMLPRLGEARALCACLSALCGLSPSSLVVS-LMQQPTGRVLDDREPLNAVRDGDFILAFAVVS 4230
G CGL NLGNTC++NSA+QCLS+TP + Y L+D + E+NK NPLG +G++ +A+L++ +WS E + PR FK + ++ PQFSG +QQDSQE LA +LD LHED+NRV KPY+ D D G+ D ++A EAWD H++RN S+IVD+F G K C +C + SVTFDPF YL++P+P+R ++ + V L+ S+P P +YR+++P++G LCA LS L + ++VV+ + ++ E L+ + + D + + V S
Sbjct: 100 GLCGLSNLGNTCFMNSALQCLSNTPPLTEYFLTDDYKEEINKENPLGMKGEIAMAYAELIRQIWSGEHSYVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLELKDAD----GRPDSVVAKEAWDNHLRRNNSIIVDIFHGLFKSTLVCPECAKVSVTFDPFCYLTLPLPMRKDRTMEVFLVR----------------------------SDPH-CKPTQYRLVVPKMGTVSDLCAALSKLSDVPAENMVVTDVYNHRFHKIFQVDEMLSHIMERDDLFVYEVKS 369
BLAST of mRNA_H-paniculata_contig844.16437.1 vs. uniprot
Match: UPI001B88C21B (ubiquitin carboxyl-terminal hydrolase 15-like isoform X1 n=5 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B88C21B) HSP 1 Score: 232 bits (592), Expect = 1.170e-58 Identity = 119/303 (39.27%), Postives = 179/303 (59.08%), Query Frame = 1
Query: 3319 VAGACGLVNLGNTCYLNSAVQCLSHTPLMRAYLLSDMWAAEVNKYNPLGTQGKLVEDFAQLLKSLWSQEFLCMYPRKFKQGLVKYKPQFSGNEQQDSQEFLAEMLDALHEDVNRVIDKPYVAAPDDDEADSGKSDQLLADEAWDRHVQRNRSVIVDLFQGQLKMECRCQDCGRKSVTFDPFMYLSVPIPIRNEKMVAVVLLPRIRTRDIVGSGTGGNAGEHGADGEAMEFSNPRQLVPVRYRMMLPRLGEARALCACLSALCGLSPSSLVVS-LMQQPTGRVLDDREPLNAVRDGDFILAFAV 4224
V G CGL NLGNTC++NS++QC+S+ PL+ ++LSD W +EVN+ NPLG +G++ +A+L+K++W+ ++ PR FK + ++ PQFSG +QQDSQE +A +LD LHED+NR+ KPY+ D D G+ D+++A EAWD + QRN S+I+D+F G LK C DC + SVTFDPF YLS+P+PI+ E+ + V +P + PV+Y++ +P++G LCA LS + + + V+ + R+ E LN V D D I + V
Sbjct: 283 VPGVCGLANLGNTCFMNSSLQCMSNVPLLTEFMLSDRWVSEVNEDNPLGNKGEIARSYAELIKTMWNGKYSYTVPRNFKVAVGRFAPQFSGYQQQDSQELMAFLLDGLHEDLNRIRTKPYLELKDAD----GRPDEIVAKEAWDNYRQRNDSIIIDIFHGLLKSTVNCPDCDKISVTFDPFCYLSLPLPIKKERQMEVFWVPLAS-----------------------------EAKPVQYKLTVPKMGSVADLCASLSQIVQVPVDKMFVTDVYNHRFHRLFAPDEGLNHVLDRDDIFVYEV 552 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig844.16437.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig844.16437.1 >prot_H-paniculata_contig844.16437.1 ID=prot_H-paniculata_contig844.16437.1|Name=mRNA_H-paniculata_contig844.16437.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1609bp MGCCSSSQTQPPAGRGAFPAPLPPPMQDNMNELLNRWRHGEVNLLQRRFRback to top mRNA from alignment at H-paniculata_contig844:948..27146- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig844.16437.1 ID=mRNA_H-paniculata_contig844.16437.1|Name=mRNA_H-paniculata_contig844.16437.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=26199bp|location=Sequence derived from alignment at H-paniculata_contig844:948..27146- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig844:948..27146- >mRNA_H-paniculata_contig844.16437.1 ID=mRNA_H-paniculata_contig844.16437.1|Name=mRNA_H-paniculata_contig844.16437.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=9654bp|location=Sequence derived from alignment at H-paniculata_contig844:948..27146- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |