prot_H-paniculata_contig843.16431.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig843.16431.1
Unique Nameprot_H-paniculata_contig843.16431.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length847
Homology
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BLAST of mRNA_H-paniculata_contig843.16431.1 vs. uniprot
Match: D8LSS4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSS4_ECTSI)

HSP 1 Score: 85.9 bits (211), Expect = 2.450e-13
Identity = 81/172 (47.09%), Postives = 92/172 (53.49%), Query Frame = 0 
Query:   43 AGEEMKETWEVGVPEVCLWRGCLSDASCGSSLCLVHFQLKEFLDVKAAKARTSSEARRFLPPGCLGSAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTAFRSPATHAVNYGASFGLHDIAAAAGEGEVVFAHSMSPLLSELFNGKLASTIRLFCQRAVAESSGQQRRG 214
            AG EM          VC WR CL+DA  G  LC VH +LK FLD KAAK    S+A RFLPPG     +  XXXXXXXXXXXXXX                TA    A  AV+ G            GEGE+    SMSPLL+EL NGKL +TI +FC+RA AE+    RRG
Sbjct: 1112 AGSEMPR-------RVCGWRACLADAVAGP-LCPVHLELKRFLDGKAAKTGGVSDAFRFLPPGSGPKRRSSXXXXXXXXXXXXXXAATEAG----------TARVVAALSAVDGG------------GEGELSVMRSMSPLLAELLNGKLGTTIAMFCRRAAAEARAPGRRG 1253
[Close]
BLAST of mRNA_H-paniculata_contig843.16431.1 vs. uniprot
Match: D8LSS3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSS3_ECTSI)

HSP 1 Score: 61.6 bits (148), Expect = 4.670e-6
Identity = 31/51 (60.78%), Postives = 37/51 (72.55%), Query Frame = 0 
Query:  279 VLKVEKEVTAELRRLSGLRVYPEAELARIRQEHEALTGEWRQAVRRPCDDN 329
            VL+ EKEVT ELRRLS L VYP AELA IR+EH AL  EW+Q + +   D+
Sbjct:   13 VLRAEKEVTLELRRLSNLEVYPAAELAHIRREHRALATEWQQVIGKDATDD 63
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig843.16431.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LSS4_ECTSI2.450e-1347.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LSS3_ECTSI4.670e-660.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig843contigH-paniculata_contig843:21959..30801 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig843.16431.1mRNA_H-paniculata_contig843.16431.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig843 21362..30973 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig843.16431.1 ID=prot_H-paniculata_contig843.16431.1|Name=mRNA_H-paniculata_contig843.16431.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=847bp
MEGANDSANKRSLDRHRRRNAERKRHIGSVACGAGGGSDGNAAGEEMKET
WEVGVPEVCLWRGCLSDASCGSSLCLVHFQLKEFLDVKAAKARTSSEARR
FLPPGCLGSAKKQRRSSLRKKRASATSTSSRDTGGGGGGGGGTTAFRSPA
THAVNYGASFGLHDIAAAAGEGEVVFAHSMSPLLSELFNGKLASTIRLFC
QRAVAESSGQQRRGRGSSRKSWVEDDSGADPDFLAAGFSSTAQAPGIPQG
PGWTRWIDPQNVEDADRQLEDDMRWTEQVLKVEKEVTAELRRLSGLRVYP
EAELARIRQEHEALTGEWRQAVRRPCDDNCSPPWDSCKWGARGEEDEEEQ
SSVGGRNVAEPRGGGRDRLRMLSINDRANAPAALAQLDRTRFFGSRMSST
NVHSISPAVAAASTFTGAATDNVMTASALDEGSNRPRVRQGKHALTMPNE
LASREGCSDGVGGVGGGGGGSDDYTVAGKDGGVQRRREVEIELGFCEMKR
NLLRRRRNEAELAKISTGTPAPSRTLLPPYDYPLVTMDSSQTCRSMIKDL
GRLPPSSGSSAEINKSPDAVQVGGSVTRLHGAQGSVGTLCVSATGGSLSP
TDSLQDQSQHQRQSHLPSAAASSRSSSPISPGKTRPRQTVPATTGKSRFP
QAAAPGIVRGLAPQTKPTSRHSKDSAQNQHCCWQQQQNHGRRRHSSPLNT
NTMEAASSSDPGRLLTPSVGVCQIATSVNKNKRGVGGCTLASLAVSKAEQ
TKVDGTANGHNDGIDCNEGSWSGDGGGGGRGGGGSDTRNSLLPRRRKSAG
SVGGNGRISRSHQQQHLSPFASRVGSGRGRGFDAAPYQTTVLFRDR*
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