mRNA_H-paniculata_contig82699.16288.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig82699.16288.1 vs. uniprot
Match: UPI0003592D34 (armadillo repeat-containing protein 2 isoform X1 n=2 Tax=Aplysia californica TaxID=6500 RepID=UPI0003592D34) HSP 1 Score: 89.4 bits (220), Expect = 7.530e-18 Identity = 57/172 (33.14%), Postives = 91/172 (52.91%), Query Frame = 1
Query: 1 RVLAKATLNDACRASVNASPGSLKCILRMLEVHREAPEVVLRLCFSLGNLTATNDGNRAALVLDLVALPALFAVIDTYC-----GRLAMGGDGDTPPAS----------------VLVNAVRVVANLAMSAEVGPAILEFGDGVVNLVSLVETVDVHAEEELMLNVVAAVTN 453
R+L+K TL+ C + + + + +L+ H ++V+RLCF LGNLT ND R L ++ ++ L ++ TYC G+ + GDG+ + VL+ +RV+ANL+++ +VGPAI D V L+S+VE DV EE+++N V AV N
Sbjct: 472 RILSKITLHTDCCSVLANQHSCYRAFVNLLKQHLLKDDLVVRLCFVLGNLTIKNDSARLKLFQEIDSIETLLNILKTYCELDRQGKTSASGDGEESQLNGGVDGESETEVNKVEDVLIKVMRVLANLSVNEDVGPAIAANPDFVELLISVVEDKDVAHHEEVVVNAVVAVNN 643
BLAST of mRNA_H-paniculata_contig82699.16288.1 vs. uniprot
Match: W4HAE1_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4HAE1_9STRA) HSP 1 Score: 86.3 bits (212), Expect = 8.830e-17 Identity = 64/159 (40.25%), Postives = 94/159 (59.12%), Query Frame = 1
Query: 1 RVLAKATLNDACRASVNASPGSLKCILRMLE----VHREAPEVVLRLCFSLGNLTATNDGNRAALVLDLVALPALFAVIDTYCGRLAMGG-DGDTPPAS---VLVNAVRVVANLAMSAEVGPAILEFGDGVVNLVSLVETVDVHAEEELMLNVVAAVTN 453
R+L+K TL++A R VN +L+ +L++L+ ++ +V+RL F LGNLTATND NR A+V L A+P L ++ Y R D DT A+ VLV VR++AN A+ VGP +L G+ L+ +++ V EELMLNVV+ +TN
Sbjct: 418 RILSKLTLHEAGRTQVNKGKHNLRHLLKLLDGDTRSRQQDAALVIRLAFILGNLTATNDRNRKAIV-TLGAVPPLVRMLKEYHIRYVHESPDNDTSAATAEDVLVKLVRLLANAAIHTSVGP-MLGTVPGIEVLLDVLDHAKVARHEELMLNVVSCLTN 574
BLAST of mRNA_H-paniculata_contig82699.16288.1 vs. uniprot
Match: A0A6A4ZAS0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZAS0_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 2.180e-16 Identity = 63/159 (39.62%), Postives = 93/159 (58.49%), Query Frame = 1
Query: 1 RVLAKATLNDACRASVNASPGSLKCILRMLE----VHREAPEVVLRLCFSLGNLTATNDGNRAALVLDLVALPALFAVIDTYCGRLAMGG-DGDTPPAS---VLVNAVRVVANLAMSAEVGPAILEFGDGVVNLVSLVETVDVHAEEELMLNVVAAVTN 453
R+L+K TL++A R VN +L+ +L++L+ ++ +V+RL F LGNLTATND NR A+V L A+P L ++ Y R D DT + VLV VR++AN A+ VGP +L G+ L+ +++ V EELMLNVV+ +TN
Sbjct: 67 RILSKLTLHEAGRTQVNKGKHNLRHLLKLLDGDTRSRQQDAALVIRLAFILGNLTATNDRNRKAIV-TLGAVPPLVRMLKEYHIRYVHESPDNDTSATTAEDVLVKLVRLLANAAIHTSVGP-MLGTVPGIEVLLDVLDHAKVARHEELMLNVVSCLTN 223
BLAST of mRNA_H-paniculata_contig82699.16288.1 vs. uniprot
Match: A0A2T7P4Z0_POMCA (Uncharacterized protein n=2 Tax=Pomacea canaliculata TaxID=400727 RepID=A0A2T7P4Z0_POMCA) HSP 1 Score: 85.1 bits (209), Expect = 2.270e-16 Identity = 58/167 (34.73%), Postives = 86/167 (51.50%), Query Frame = 1
Query: 1 RVLAKATLNDACRASVNASPGSLKCILRMLEVHREAPEVVLRLCFSLGNLTATNDGNRAALVLDLVALPALFAVIDTYCGRLAMGG---------DGDTPPAS-------VLVNAVRVVANLAMSAEVGPAILEFGDGVVNLVSLVETVDVHAEEELMLNVVAAVTN 453
R+ +K TL+ C ++ G K + +L+ + + ++V+RLCF LGNLTA N+ R L + AL L V+ TY G D T S VL+ +RV+ANL++S +VGP I + NL+ ++E D+ EEL+LN VAAV N
Sbjct: 484 RIFSKVTLHTDCSTALADQHGCYKSFVSLLKRYLKKEDLVVRLCFVLGNLTAKNEQARQRLFQEKDALDVLLNVLRTYNDMDKQGAHEVPAEPPLDESTENTSSINKVEDVLIKVIRVLANLSISEDVGPFIAASPQCITNLLHIIERKDITESEELILNCVAAVNN 650
BLAST of mRNA_H-paniculata_contig82699.16288.1 vs. uniprot
Match: A0A397A9S5_9STRA (Uncharacterized protein n=11 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397A9S5_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 2.870e-16 Identity = 63/159 (39.62%), Postives = 93/159 (58.49%), Query Frame = 1
Query: 1 RVLAKATLNDACRASVNASPGSLKCILRMLE----VHREAPEVVLRLCFSLGNLTATNDGNRAALVLDLVALPALFAVIDTYCGRLAMGG-DGDTPPAS---VLVNAVRVVANLAMSAEVGPAILEFGDGVVNLVSLVETVDVHAEEELMLNVVAAVTN 453
R+L+K TL++A R VN +L+ +L++L+ ++ +V+RL F LGNLTATND NR A+V L A+P L ++ Y R D DT + VLV VR++AN A+ VGP +L G+ L+ +++ V EELMLNVV+ +TN
Sbjct: 208 RILSKLTLHEAGRTQVNKGKHNLRHLLKLLDGDTRSRQQDAALVIRLAFILGNLTATNDRNRKAIV-TLGAVPPLVRMLKEYHIRYVHESPDNDTSATTAEDVLVKLVRLLANAAIHTSVGP-MLGTVPGIEVLLDVLDHAKVARHEELMLNVVSCLTN 364
BLAST of mRNA_H-paniculata_contig82699.16288.1 vs. uniprot
Match: A0A1V9ZG87_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZG87_9STRA) HSP 1 Score: 84.0 bits (206), Expect = 5.620e-16 Identity = 61/172 (35.47%), Postives = 90/172 (52.33%), Query Frame = 1
Query: 1 RVLAKATLNDACRASVNASPGSLKCILRMLE-------VHREAPEVVLRLCFSLGNLTATNDGNRAALVLDLVALPALFAVIDTYCGRLAMGGDGDTPPA--------------SVLVNAVRVVANLAMSAEVGPAILEFGDGVVNLVSLVETVDVHAEEELMLNVVAAVTN 453
RVL+K TL++A R +N +P +L ++++L+ HR +++RLCF LGNLTA+ND NR L + L A+P L ++ Y A PP VLV VR++ANL+++A GP + G+ L+ L+ EEL LNVV+ VTN
Sbjct: 388 RVLSKLTLHEAGRTQLNKAPETLGHLVQLLDRSSAAAAPHRFQAALLVRLCFVLGNLTASNDKNRKLLAVQLRAVPVLVRILRQYGALYAQ--QAPKPPXXXXXXXXXXXXXSEDVLVKLVRLLANLSINATAGP-LAAAAPGIDALLELLAHASACGHEELKLNVVSCVTN 556
BLAST of mRNA_H-paniculata_contig82699.16288.1 vs. uniprot
Match: F0YDU6_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YDU6_AURAN) HSP 1 Score: 84.0 bits (206), Expect = 5.620e-16 Identity = 58/168 (34.52%), Postives = 87/168 (51.79%), Query Frame = 1
Query: 1 RVLAKATLNDACRASVNASPGSLKCILRMLEVHREA-----------------PEVVLRLCFSLGNLTATNDGNRAALVLDLVALPALFAVIDTYCGRLAMGGDGDTPPASVLVNAVRVVANLAMSAEVGPAILEFGDGVVNLVSLVETVDVHAEEELMLNVVAAVTN 453
R LAK +L++ R +++ P L +L LE E P VVLRL F+LGNLTA+ND NR L +D L A+++ GG GD VL+ +R+VAN++++ +VG + GV +L L+ + EEL+LN+V+A+TN
Sbjct: 370 RALAKLSLHEPTRTALHGDPKRLGDVLATLEAAHEGALALGGTAEPSDALAPMPAVVLRLAFALGNLTASNDANRVVLGIDHGGALPLVAMLEKSGAAFLAGGGGDDAE-QVLIKLIRLVANMSINPDVGVLVAN-APGVRSLTRLLRVALDRSREELVLNIVSAITN 535
BLAST of mRNA_H-paniculata_contig82699.16288.1 vs. uniprot
Match: A0A210QY65_MIZYE (Armadillo repeat-containing protein 2 n=4 Tax=Pectinidae TaxID=6566 RepID=A0A210QY65_MIZYE) HSP 1 Score: 83.2 bits (204), Expect = 1.060e-15 Identity = 52/163 (31.90%), Postives = 84/163 (51.53%), Query Frame = 1
Query: 1 RVLAKATLNDACRASVNASPGSLKCILRMLEVHREAPEVVLRLCFSLGNLTATNDGNRAALVLDLVALPALFAVIDTYC-------GRLAMGGDGD-----TPPASVLVNAVRVVANLAMSAEVGPAILEFGDGVVNLVSLVETVDVHAEEELMLNVVAAVTN 453
R+ +K TL+ C + P S K + +L H + ++V+R+CF LGN+TA ND R L + A L +V+ Y G+ +G+ V++ VRV+ANL+++ VGP I + L+S++E ++ A EEL+LN VA + N
Sbjct: 492 RIFSKITLHTDCCTVLADQPSSYKSFINLLNKHLQKSDMVVRVCFVLGNITAKNDEARVRLYQENKAFDVLLSVLKLYLEMDIKAQGKEEKSEEGERGNKLNKREDVMIKVVRVIANLSINETVGPLIASNAQCIDLLLSILEYKEISASEELVLNTVATINN 654
BLAST of mRNA_H-paniculata_contig82699.16288.1 vs. uniprot
Match: A0A6J8AR73_MYTCO (ARMC2 n=4 Tax=Mytilus TaxID=6548 RepID=A0A6J8AR73_MYTCO) HSP 1 Score: 81.6 bits (200), Expect = 3.690e-15 Identity = 53/168 (31.55%), Postives = 85/168 (50.60%), Query Frame = 1
Query: 1 RVLAKATLNDACRASVNASPGSLKCILRMLEVHREAPEVVLRLCFSLGNLTATNDGNRAALVLDLVALPALFAVIDTYCGR-----------------LAMGGDGDTPPASVLVNAVRVVANLAMSAEVGPAILEFGDGVVNLVSLVETVDVHAEEELMLNVVAAVTN 453
R+ +K TL+ C ++ P + K + +L + +VV+R+CF LGN+TA ND R L + ++ AL A++ Y R + G D + VL+ VRVVAN++++ VGP + V L++++E DV + EEL LN VA + N
Sbjct: 504 RIFSKVTLHTDCCMALITQPSAYKSFIHLLNKQQHKADVVVRVCFILGNMTAKNDDARLRLFQENKSMEALLAIMKYYLDRDIKIRSRVKEKETSKQDSSKGNDCE----DVLIKTVRVVANMSINEMVGPVLASNHQFVELLLNILECKDVQSSEELSLNTVATINN 667
BLAST of mRNA_H-paniculata_contig82699.16288.1 vs. uniprot
Match: UPI00201F2127 (armadillo repeat-containing protein 2-like isoform X1 n=6 Tax=Haliotis TaxID=6452 RepID=UPI00201F2127) HSP 1 Score: 80.5 bits (197), Expect = 9.280e-15 Identity = 52/169 (30.77%), Postives = 86/169 (50.89%), Query Frame = 1
Query: 1 RVLAKATLNDACRASVNASPGSLKCILRMLEVHREAPEVVLRLCFSLGNLTATNDGNRAALVLDLVALPALFAVIDTYCGRLAM---------------GGDGDTPPAS---VLVNAVRVVANLAMSAEVGPAILEFGDGVVNLVSLVETVDVHAEEELMLNVVAAVTN 453
R+ +K TL+ C + K + +L H +VV+R+CF LGN+TA ND R L + A+P L +V+ T+ + DGD + VL+ +RV+ANL+++ VGP I + V L++++++ D+ + EEL+LN VA + N
Sbjct: 498 RIFSKVTLHTDCCTVLANEHSCYKSFIHLLNRHVNKEDVVVRVCFVLGNITAKNDDARRRLFQETNAMPTLLSVLKTFHNLESQKRSKPENVTTNGRHNNNDGDGAVNTIDDVLIKVIRVIANLSINDSVGPIIASHVECVQLLLAILDSKDIGSSEELILNTVATINN 666 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig82699.16288.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig82699.16288.1 >prot_H-paniculata_contig82699.16288.1 ID=prot_H-paniculata_contig82699.16288.1|Name=mRNA_H-paniculata_contig82699.16288.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=151bp RVLAKATLNDACRASVNASPGSLKCILRMLEVHREAPEVVLRLCFSLGNLback to top mRNA from alignment at H-paniculata_contig82699:1..505+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig82699.16288.1 ID=mRNA_H-paniculata_contig82699.16288.1|Name=mRNA_H-paniculata_contig82699.16288.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=505bp|location=Sequence derived from alignment at H-paniculata_contig82699:1..505+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig82699:1..505+ >mRNA_H-paniculata_contig82699.16288.1 ID=mRNA_H-paniculata_contig82699.16288.1|Name=mRNA_H-paniculata_contig82699.16288.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=906bp|location=Sequence derived from alignment at H-paniculata_contig82699:1..505+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |