mRNA_H-paniculata_contig8249.16267.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig8249.16267.1 vs. uniprot
Match: D8LNU7_ECTSI (Protein kinase domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNU7_ECTSI) HSP 1 Score: 288 bits (738), Expect = 1.140e-81 Identity = 163/276 (59.06%), Postives = 196/276 (71.01%), Query Frame = 2
Query: 2 SAVKYLHQKGITHRDIKLENILQSVSGPLKLCDFGSCVQGRVKLETAEQRANEEEVVEKTTTQMYRAPEMVDLYMQRELTEKVDVWALGCVLFAVCYLKHPFQDAGNLGILNARIRIPEDSRFSENLKELTQRMFVASPPYRPSVAEVESCVHSLSRGHPLPPPRNPRPPEAKEVAGDFTASGSGAAVAIEPGIMSSAAGHPRDNGGR-------------GGEREKDAGRKSLVAAKGTTTQSKRAGSKSK------EPQLNPNSVAARRLASRK 772
SAVKYLH KGITHRD+KLENIL+S SGP KLCDFGSCVQGRV L+TAEQRANEEEVVEKTTTQMYRAPEMVDLY++RELTEKVD+WALGC+L+AVCYLK+PFQDAGNLGILNA+IRIP+DS FS L +L +R ASP +RPS +EVE+ +H+LS+G+PLPPPR+ + + +G A A G+ + AA P N G GG + +GR A + S++ + K +PQLNPNSVAARRLASRK
Sbjct: 133 SAVKYLHDKGITHRDMKLENILRSSSGPHKLCDFGSCVQGRVPLDTAEQRANEEEVVEKTTTQMYRAPEMVDLYLERELTEKVDIWALGCILYAVCYLKNPFQDAGNLGILNAKIRIPDDSVFSSGLVDLIRRCLTASPTHRPSASEVEAGIHALSKGNPLPPPRHKKKSSEADCG-----HAAGTAAASVGGVAAQAATAPASNSGGLSNSVGALARNVVGGRGHEGSGRTVTAAGAAGKSYSQQVLTPPKAKPVAAQPQLNPNSVAARRLASRK 403
BLAST of mRNA_H-paniculata_contig8249.16267.1 vs. uniprot
Match: A0A6H5K0M2_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0M2_9PHAE) HSP 1 Score: 288 bits (737), Expect = 1.300e-78 Identity = 168/276 (60.87%), Postives = 200/276 (72.46%), Query Frame = 2
Query: 2 SAVKYLHQKGITHRDIKLENILQSVSGPLKLCDFGSCVQGRVKLETAEQRANEEEVVEKTTTQMYRAPEMVDLYMQRELTEKVDVWALGCVLFAVCYLKHPFQDAGNLGILNARIRIPEDSRFSENLKELTQRMFVASPPYRPSVAEVESCVHSLSRGHPLPPPRNPRPPEAKE---VAGDFTASGSGAAV------AIEPGIMSSAAGHPRDN--GGRGGEREKDAGRKSLVAAKGTTTQS--------KRAGSKSKEPQLNPNSVAARRLASRK 772
SAVKYLH KGITHRD+KLENIL+S SG KLCDFGSCVQGRV L+TAEQRANEEEVVEKTTTQMYRAPEMVDLY++RELTE+VD+WALGC+L+AVCYLK+PFQDAGNLGILNA+IRIP+DS FS L +L +R ASP +RPS +EVE+ +H+LS+G+PLPPPR+ + + AG AS +G A A G +S++ G N GGRG DAG V A G +S +A + +PQLNPNSVAARRLASRK
Sbjct: 132 SAVKYLHDKGITHRDVKLENILRSSSGSHKLCDFGSCVQGRVPLDTAEQRANEEEVVEKTTTQMYRAPEMVDLYLERELTERVDIWALGCILYAVCYLKNPFQDAGNLGILNAKIRIPDDSVFSSGLVDLIRRCLTASPTHRPSASEVEAGIHALSKGNPLPPPRHKKKSSEADCGHAAGTAAASVAGVAAQAATAPASNSGGLSNSVGALARNVVGGRG-----DAGSGRTVTAAGAVGKSYSQQVLTPPKAKPVAAQPQLNPNSVAARRLASRK 402
BLAST of mRNA_H-paniculata_contig8249.16267.1 vs. uniprot
Match: A0A835ZCB7_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCB7_9STRA) HSP 1 Score: 172 bits (435), Expect = 5.300e-44 Identity = 85/154 (55.19%), Postives = 104/154 (67.53%), Query Frame = 2
Query: 14 YLHQKGITHRDIKLENILQSVSGPLKLCDFGSCVQGRVKLETAEQRANEEEVVEKTTTQMYRAPEMVDLYMQRELTEKVDVWALGCVLFAVCYLKHPFQDAGNLGILNARIRIPEDSRFSENLKELTQRMFVASPPYRPSVAEVESCVHSLSRG 475
YLH GI HRDIKLEN L + G +LCDFGS V+G V LE+A QRANE EV+E+TTTQ +RAPEM DL++ REL VDVWALGCV + + YL+HPF NL I+NARI P S++ K L RM VA P R S A+ SC+ ++ G
Sbjct: 134 YLHGMGIAHRDIKLENCLIAADGSCRLCDFGSAVRGPVSLESAAQRANEAEVIERTTTQQFRAPEMADLFVARELGTAVDVWALGCVAYTLAYLRHPFPSDSNLAIINARIVFPTAPPLSDDFKALVARMLVADPAARASAADALSCIAAMEAG 287
BLAST of mRNA_H-paniculata_contig8249.16267.1 vs. uniprot
Match: A0A812U9J4_SYMMI (Hypothetical protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812U9J4_SYMMI) HSP 1 Score: 179 bits (454), Expect = 1.950e-43 Identity = 86/164 (52.44%), Postives = 113/164 (68.90%), Query Frame = 2
Query: 5 AVKYLHQKG--ITHRDIKLENILQSVSGPLKLCDFGSCVQGRVKLETAEQRANEEEVVEKTTTQMYRAPEMVDLYMQRELTEKVDVWALGCVLFAVCYLKHPFQDAGNLGILNARIRIPEDSRFSENLKELTQRMFVASPPYRPSVAEVESCVHSLSRGHPLPP 490
AV LH+ + HRD+KLENIL S+ G +KLCDFGSC+ G V T E+R+ EE + K TTQMYRAPEMVDLYM+ ELTE D+WALGC+L+ +C++ HPFQDAGNLGIL+A++ +P DS ++K L RM RPSV + +L+ +P+PP
Sbjct: 94 AVLPLHESSPPVIHRDLKLENILHSIGGDVKLCDFGSCMIGYVPTRTPEERSKAEEAISKETTQMYRAPEMVDLYMRDELTESTDIWALGCILYCLCFISHPFQDAGNLGILSAKVTMPHDSAVPPDMKVLIMRMLDMDAEARPSVQYLIQATDALATNNPIPP 257
BLAST of mRNA_H-paniculata_contig8249.16267.1 vs. uniprot
Match: A0A7S1GKX8_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GKX8_CYCTE) HSP 1 Score: 157 bits (396), Expect = 1.540e-36 Identity = 83/177 (46.89%), Postives = 117/177 (66.10%), Query Frame = 2
Query: 2 SAVKYLHQKG--ITHRDIKLENILQSVSGPLKLCDFGSCVQGRVKLETAEQRANEEEVVEKTTTQMYRAPEMVDLYMQRELTEKVDVWALGCVLFAVCYLKHPFQDAGNLGILNARIRIPEDSRFSENLKELTQRMFVASPPYRPSVAEVESCVHSLSRGHPLPPPRN-PRPPEAKE 523
+AV YLH + I HRD+K N L +G KLCDFGS V G V+L+T + RA EEV++KTTTQM+RAPEMVDL+M ++LT+ DVWALGC L+++ +L++ F++ NL IL+ +IPED+ + E L EL RM R + EV C+ ++ G PLPP + P+ +A+E
Sbjct: 195 NAVSYLHAQRPPIVHRDLKPVNFLVK-NGAYKLCDFGSAVFGHVELKTPKSRAEAEEVIQKTTTQMFRAPEMVDLFMAKKLTQSTDVWALGCCLYSLAFLQNCFEEGSNLAILSRNYKIPEDNPYGEGLVELIDRMLTLDSKARSDMTEVILCLSAIYSGRPLPPRKKVPKTKKAEE 370
BLAST of mRNA_H-paniculata_contig8249.16267.1 vs. uniprot
Match: A0A1Z5JH39_FISSO (AP2-associated kinase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JH39_FISSO) HSP 1 Score: 155 bits (393), Expect = 7.330e-36 Identity = 79/170 (46.47%), Postives = 111/170 (65.29%), Query Frame = 2
Query: 2 SAVKYLHQKG--ITHRDIKLENILQSVSGPLKLCDFGSCVQGRVKLETAEQRANEEEVVEKTTTQMYRAPEMVDLYMQRELTEKVDVWALGCVLFAVCYLKHPFQDAGNLGILNARIRIPEDSRFSENLKELTQRMFVASPPYRPSVAEVESCVHSLSRGHPLPPPRNPR 505
+AV YLH + I HRD+K N L G KLCDFGS V G VKL+T + R+ EEV++KTTTQM+RAPEMVDL+M ++LT+ DVWALGC L+++ +L+ F++ NL IL+ +IPE++ + + L EL RM R + EV C+ ++ G PLPP + P+
Sbjct: 189 NAVSYLHAQRPPIVHRDLKPANFLVK-GGAYKLCDFGSAVFGHVKLDTPQARSEAEEVIQKTTTQMFRAPEMVDLFMAKKLTQATDVWALGCCLYSMAFLQDCFEEGSNLAILSRNFKIPENNPYGDGLTELIDRMLTVDVKARADMTEVILCLSAVYSGRPLPPRKEPK 357
BLAST of mRNA_H-paniculata_contig8249.16267.1 vs. uniprot
Match: A0A7S3P7A6_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P7A6_9STRA) HSP 1 Score: 156 bits (395), Expect = 1.020e-35 Identity = 81/165 (49.09%), Postives = 109/165 (66.06%), Query Frame = 2
Query: 2 SAVKYLHQKG--ITHRDIKLENILQSVSGPLKLCDFGSCVQGRVKLETAEQRANEEEVVEKTTTQMYRAPEMVDLYMQRELTEKVDVWALGCVLFAVCYLKHPFQDAGNLGILNARIRIPEDSRFSENLKELTQRMFVASPPYRPSVAEVESCVHSLSRGHPLPP 490
+AV YLH + I HRD+K N L +G KLCDFGS V G V L T E RA EEV++KTTTQM+RAPEMVDLYM ++LT+ DVWALGC L+++ +L++ F++ NL IL+ + +IPED+ + + L EL RM R + EV C+ ++ G PLPP
Sbjct: 200 NAVSYLHAQRPPIVHRDLKPANFLVKNTG-YKLCDFGSAVFGHVDLRTPEARAEAEEVIQKTTTQMFRAPEMVDLYMAKKLTQATDVWALGCCLYSLAFLQNCFEEGSNLAILSRKYKIPEDNPYGDGLVELLDRMLTVDSKARADMTEVILCLSAVYSGRPLPP 363
BLAST of mRNA_H-paniculata_contig8249.16267.1 vs. uniprot
Match: B7G086_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G086_PHATC) HSP 1 Score: 157 bits (396), Expect = 1.350e-35 Identity = 81/165 (49.09%), Postives = 109/165 (66.06%), Query Frame = 2
Query: 2 SAVKYLHQKG--ITHRDIKLENILQSVSGPLKLCDFGSCVQGRVKLETAEQRANEEEVVEKTTTQMYRAPEMVDLYMQRELTEKVDVWALGCVLFAVCYLKHPFQDAGNLGILNARIRIPEDSRFSENLKELTQRMFVASPPYRPSVAEVESCVHSLSRGHPLPP 490
+AV YLH + I HRD+K+ N L G KLCDFGS V G V L+T + R+ EEV+EKTTTQM+RAPEMVDLYM ++LT+ DVWALG L+++ YL++ F++ NL IL+ +IPE++ + E L EL RM +R + EV C+ +L G PLPP
Sbjct: 208 NAVSYLHAQRPPIVHRDLKMANFLVK-DGAYKLCDFGSAVFGHVDLKTPQNRSEAEEVIEKTTTQMFRAPEMVDLYMCKKLTQATDVWALGVCLYSMAYLQNCFEEGSNLAILSNNYKIPEENHYGEGLVELIDRMLTIDSKHRADMTEVILCLSALYSGRPLPP 371
BLAST of mRNA_H-paniculata_contig8249.16267.1 vs. uniprot
Match: A0A7S4IND9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IND9_9STRA) HSP 1 Score: 150 bits (379), Expect = 2.600e-35 Identity = 77/165 (46.67%), Postives = 106/165 (64.24%), Query Frame = 2
Query: 2 SAVKYLHQKG--ITHRDIKLENILQSVSGPLKLCDFGSCVQGRVKLETAEQRANEEEVVEKTTTQMYRAPEMVDLYMQRELTEKVDVWALGCVLFAVCYLKHPFQDAGNLGILNARIRIPEDSRFSENLKELTQRMFVASPPYRPSVAEVESCVHSLSRGHPLPP 490
+AV YLH + I HRD+K N L +G KLCDFGS V G V L T R+ EEV++KTTTQM+RAPEMVDLYM ++LT+ DVWALGC L+++ + ++ F++ NL IL+ +IP+D+ + E + EL RM R + EV C+ ++ G PLPP
Sbjct: 44 NAVSYLHAQRPPIVHRDLKPVNFLVK-NGAYKLCDFGSAVFGHVDLRTPRARSEAEEVIQKTTTQMFRAPEMVDLYMVKKLTQATDVWALGCCLYSLAFFQNCFEEGSNLAILSRNYKIPDDNPYGEGIVELIDRMLTVDVKARADMTEVILCLSAIYSGRPLPP 207
BLAST of mRNA_H-paniculata_contig8249.16267.1 vs. uniprot
Match: A0A7S2WXA6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WXA6_9STRA) HSP 1 Score: 154 bits (389), Expect = 7.560e-35 Identity = 84/179 (46.93%), Postives = 110/179 (61.45%), Query Frame = 2
Query: 2 SAVKYLHQKG--ITHRDIKLENILQSVSGPLKLCDFGSCVQGRVKLETAEQRANEEEVVEKTTTQMYRAPEMVDLYMQRELTEKVDVWALGCVLFAVCYLKHPFQDAGNLGILNARIRIPEDS------RFSENLKELTQRMFVASPPYRPSVAEVESCVHSLSRGHPLPPPRNPRPPE 514
+AVK LH ITHRD+KLENIL + G KLCDFGSCV G + A +R+ +EEV+EK+TT YRAPEM DLY + LT+ D+WALGC+ + + +L HPFQDAG LGI+ AR IP +S +F +L RM R + EV C+ ++++ PLP P PPE
Sbjct: 147 AAVKALHTSNPPITHRDLKLENILLAADGHCKLCDFGSCVLGDQYVRNASERSTQEEVIEKSTTPNYRAPEMCDLYSVQVLTQATDIWALGCMFYTILFLAHPFQDAGTLGIIEARYSIPHESTALYSPQFVTRWTDLLGRMLHKIVGARADIQEVLDCLGAIAQNSPLPSP----PPE 321 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8249.16267.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig8249.16267.1 >prot_H-paniculata_contig8249.16267.1 ID=prot_H-paniculata_contig8249.16267.1|Name=mRNA_H-paniculata_contig8249.16267.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=702bp MYRAPEMVDLYMQRELTEKVDVWALGCVLFAVCYLKHPFQDAGNLGILNAback to top mRNA from alignment at H-paniculata_contig8249:1700..10398+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig8249.16267.1 ID=mRNA_H-paniculata_contig8249.16267.1|Name=mRNA_H-paniculata_contig8249.16267.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8699bp|location=Sequence derived from alignment at H-paniculata_contig8249:1700..10398+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig8249:1700..10398+ >mRNA_H-paniculata_contig8249.16267.1 ID=mRNA_H-paniculata_contig8249.16267.1|Name=mRNA_H-paniculata_contig8249.16267.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=4212bp|location=Sequence derived from alignment at H-paniculata_contig8249:1700..10398+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |