mRNA_H-paniculata_contig1022.162.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig1022.162.1 vs. uniprot
Match: D7FIY1_ECTSI (Aminoacyl-tRNA hydrolase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIY1_ECTSI) HSP 1 Score: 326 bits (835), Expect = 1.030e-89 Identity = 390/1063 (36.69%), Postives = 490/1063 (46.10%), Query Frame = 1
Query: 181 PPVAFHVTGFGVFNGVPDNPTTHLVKELPGELRARGHIRSRRASGDGAEADSASCASSTGQQPGALAAHDG--CFEVNSHVVLDVSAQEGGRQVREMHARLNRRRRKKRSGGVSVVAKDTAGYPTRRSIYEDTISKGDGAAGKISGKD-----------------HNLDIAGGCCESAAVAGISNGSESGGSGRLDP-EXXXXXXXNRQISVFVHCGVDWGGSKFKLESRGYNEATFRVPDEKGYWPADAAIDENNPDITHVRETTLPIADTLRKLDEMGWGPDRVQESTCAGRFVCNYVYYTSLGLCE-----------------EASSAAAESGL---------------------------------------------------------PHNDGRHSLFVHVPPFSVIGKEEQLSFVADCLAAIAECLGGVSNDPEEPVGTSVAGPKGVFSSAPANMIVP---ISPDDGQRAHPMRIHLTASPCQGHTPPQAP-PSP--AVPSRSNAGLPRAYTAIARSHSLPYSDSRRFSL-PRAADMDDSRSAGTSMMIWDDDDFQVGVTKRASLPLPLLGEDEGIRISRFSSSPGAASLRHADSNGGGSSSGNGCGNRREYSSHRSHHCSDAVHEYEGEYEQETPAEVTKRRLVEAGFEDLDVEAAMATTGTDDMETNMQLLFDITPLLPRGSPAVGDIGAL--REFLSSSNDQVGHRXXXXXXXXXXXRHSSGGNRVRTRSVGSAAGM-------GGVSPKWAGDVVPKVMPTTNGSSPSPVVSSDTSTPRGRRGLLNRFRRYKKGSSXXXXXXXATVSPSPAKIPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLLRTIIGSGVRGEKVDLSAGWSDTSQLGGATLRLVLLVRLDVGMGPGAIAAYCCRAVLAATRKAEGGGRADALAVWRDAGEAMVVLAVQDSRALTAVLEVAATSNLPITMVRDKGSV---GAQEDSCIVVALGPASMSALHAVAGGMPVL 3030
P V FHVTGFGVFNGV DNPTTHLV +L GEL AR + G +P AL DG FEV S VL VSA+ GGRQ+RE+HA + R GG V + D + DG G + C + + G+ + +G D E + +VFVHCGV+ G +F LE++G+NEATFRVPDE+GY P+ A ++++NP H R TT+P+AD L +L+ GWG + V+ES AGRFVCNYVYY+SLGLCE E + + E G P GRHSLF+HVPPF I KE+QL+ + CL+AIA L +S + A L A P P AP PSP A S S G+ A P S R S+ R A S S G + ++ +G K L L +++ R + G + + GG S SG G ++ +D E EG+ E ET A+ T+RRL+EAGF+ LDV+AAMATTG+D+ + NM+ L DITPLLPRG+P+ D G L REF +++ G G R GS GGVSP + R ++R GS+ XXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX R GSG R +AGW +TS L G L L LLVRLD+GM PG +AA C +A LAA RKAEG GR+D LAVWR+AGE+M+VL +D+ L A+L A+S+LPITMVRDK + + D+C V A+GPA +S+L +AGG+ VL
Sbjct: 23 PKVVFHVTGFGVFNGVADNPTTHLVNDLEGELEARRXXXXXXXXDCKGGQRIGKTGQTGGSEPPALDGDDGEEDFEVRSCTVLHVSAEVGGRQLRELHAASSASSRG--GGGREAV------------LNGDPAASADGGTGGLGNASVXXXXXXXXXXXXXXXXXXXXXXXXCANTEQGDATTGGNATAVNGDNDEKEGKDNEDDDSGATVFVHCGVNGGSKRFALETQGFNEATFRVPDEQGYRPSFAPVEQDNPFTEHCRVTTVPVADVLARLERSGWGREYVEESKDAGRFVCNYVYYSSLGLCERSGGRAPAAAPGKGGAEEVAGPSGEGGEVKDAFCFSGDSVSEVAAGAATGPGERRSLDSGNGXXXXXXXXXXXXXXXXXXXAGAPPAPSGRHSLFIHVPPFEAIPKEKQLALLVACLSAIASSLASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSLSTYEAAV-----LAAEPEACSPDPPAPLPSPDNAAKSSSGGGVESAVP--------PSSTGRESSIWERTAREQGSESQGGVAL--ENGGGNMGREKLVQFALDGLADNQA--EGRVGNRGGGGDKIYPEGTGGHSGSGEG----------QAGELNDE--EEEGQEEGETLADATRRRLIEAGFDGLDVDAAMATTGSDNTDVNMEFLLDITPLLPRGAPS--DAGGLYPREF-ATNEPATGRPAGGSGGVGADGERGRGETTSHHRRRGSXXXXXXXXXXXGGVSPAGMXXXXXXXXXXXXXA----------------RDGVDRVPSGFGGSTKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHVIRSHSPPPVRSIGAGNGFRDE--------RKRRGSGSRASAFSAAAGWGETS-LSGPNLTLALLVRLDLGMSPGTLAAQCAKAALAAARKAEGSGRSDTLAVWREAGESMIVLGAEDAANLDAILVFGASSHLPITMVRDKQAAWVGNVRADTCTVAAIGPAPISSLRTIAGGLRVL 1014
BLAST of mRNA_H-paniculata_contig1022.162.1 vs. uniprot
Match: A0A835YMC8_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMC8_9STRA) HSP 1 Score: 145 bits (367), Expect = 1.010e-35 Identity = 111/338 (32.84%), Postives = 140/338 (41.42%), Query Frame = 1
Query: 187 VAFHVTGFGVFNGVPDNPTTHLVKELPGELRARGHIRSRRASGDGAEADSASCASSTGQQPGALAAHDGCFEVNSHVVLDVSAQEGGRQVREMHARLNRRRRKKRSGGVSVVAKDTAGYPTRRSIYEDTISKGDGAAGKISGKDHNLDIAGGCCESAAVAGISNGSESGGSGRLDPEXXXXXXXNRQISVFVHCGVDWGGSKFKLESRGYNEATFRVPDEKGYWPADAAIDENNPDITHVRETTLPIADTLRKLDEMGWGPDR-VQESTCAGRFVCNYVYYTSLGLCEEASSAAAESGLPHNDGRHSLFVHVPPFSVIGKEEQLSFVADCLAAIAECL 1197
V FH+TGFG FNGVPDNPT L+K LP L + + + G L V S+ VLDVSA+ Q+R + ++G+ +G G I+V+VHCGVD GG FKLE YNEATFRVPDE+G P A I N ++H +T LP A L GW DR V+ ST GRFVCNYVYY SL C S AA+ + +LF+H PP + +G E+QL F+ DCL IA+ L
Sbjct: 7 VVFHLTGFGKFNGVPDNPTWRLMKSLPVYLSQQRN------------------------ELGQL------LRVASYTVLDVSAEGAADQLRVIQ--------------------------------------------------------------------TSGTNAGVDG---------------ITVYVHCGVDAGGMHFKLEECAYNEATFRVPDERGATPNGALIMAENGTLSHTYQTNLPTAWIHETLSAAGW--DRHVRRSTDPGRFVCNYVYYKSLAFC----SGAAD--------KRALFIHCPPHTSVGPEDQLCFIKDCLIVIADAL 217
BLAST of mRNA_H-paniculata_contig1022.162.1 vs. uniprot
Match: A0A2P2LRS7_RHIMU (Uncharacterized protein n=1 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2LRS7_RHIMU) HSP 1 Score: 112 bits (281), Expect = 3.490e-24 Identity = 68/173 (39.31%), Postives = 91/173 (52.60%), Query Frame = 1
Query: 670 ISNGSESGGSGRLDPEXXXXXXXNRQISVFVHCGVDWGGSKFKLESRGYNEATFRVPDEKGYWPADAAIDENNPDITHVRETTLPIADTLRKLDEMGWGPDRVQESTCAGRFVCNYVYYTSLGLCEEASSAAAESGLPHNDGRHSLFVHVPPFSVIGKEEQLSFVADCLAAIA 1188
++N S S SGR+ ++VH GV+ G +KF +E R NEATFR PDE G+ P I ++ I+ VR+TTLP+ + + L E G+ V S AGRFVCNYVYY SL E+ +G SLFVHVP F I ++ Q+ F A L +A
Sbjct: 75 VTNNSNSQASGRV---------------IWVHFGVNSGATKFAIEHRAVNEATFRCPDEMGWKPQKVPIIPSDGGISRVRKTTLPVEEIAKALVEKGYD---VMTSDDAGRFVCNYVYYHSLWFAEQ-------------NGIKSLFVHVPLFLTINEDTQMQFAASLLEVLA 216
BLAST of mRNA_H-paniculata_contig1022.162.1 vs. uniprot
Match: UPI0019D683BD (pyrrolidone-carboxylate peptidase-like n=1 Tax=Panicum virgatum TaxID=38727 RepID=UPI0019D683BD) HSP 1 Score: 112 bits (279), Expect = 6.610e-24 Identity = 69/185 (37.30%), Postives = 92/185 (49.73%), Query Frame = 1
Query: 661 VAGISNGSESGGSGRLDP---------EXXXXXXXNRQISVFVHCGVDWGGSKFKLESRGYNEATFRVPDEKGYWPADAAIDENNPDITHVRETTLPIADTLRKLDEMGWGPDRVQESTCAGRFVCNYVYYTSLGLCEEASSAAAESGLPHNDGRHSLFVHVPPFSVIGKEEQLSFVADCLAAIA 1188
V G E+ G G L P + N++ + +H G + G +F LE++ NEATFR PDE G+ P I ++ I H R+TTLP+ + + L +MG+ V S AGRFVCNYVYY SL E+ G SLFVH P FS I +E Q+ FVA L +A
Sbjct: 48 VLGSCTVLEAAGQGALGPLYELLESTVQDREYGTLNQEQVILLHFGANSGSLRFALENQAVNEATFRCPDELGWKPQRVPIMSSDGSILHARQTTLPVKEISKYLQQMGYD---VTPSDDAGRFVCNYVYYHSLRFAEK-------------HGIRSLFVHFPLFSAIDEEVQMQFVASLLEVLA 216
BLAST of mRNA_H-paniculata_contig1022.162.1 vs. uniprot
Match: S8CC56_9LAMI (Uncharacterized protein n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8CC56_9LAMI) HSP 1 Score: 111 bits (278), Expect = 8.540e-24 Identity = 62/146 (42.47%), Postives = 84/146 (57.53%), Query Frame = 1
Query: 751 SVFVHCGVDWGGSKFKLESRGYNEATFRVPDEKGYWPADAAIDENNPDITHVRETTLPIADTLRKLDEMGWGPDRVQESTCAGRFVCNYVYYTSLGLCEEASSAAAESGLPHNDGRHSLFVHVPPFSVIGKEEQLSFVADCLAAIA 1188
++++H GV+ G ++F LE+R NEATFR PDE G+ P I + I+ VRE++LP+ D + L +MG+ +V S AGRFVCNYVYY SL E +G SLFVHVP F I +E Q+ F A L +A
Sbjct: 87 TIWIHFGVNSGATRFALENRAVNEATFRCPDEMGWKPQRVPIVPADGSISRVRESSLPVEDITKSLSKMGY---QVTTSDDAGRFVCNYVYYHSLRFAEL-------------NGVKSLFVHVPLFVTIDEETQMGFAAALLEVVA 216
BLAST of mRNA_H-paniculata_contig1022.162.1 vs. uniprot
Match: UPI000644EAD2 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644EAD2) HSP 1 Score: 112 bits (279), Expect = 9.700e-24 Identity = 61/148 (41.22%), Postives = 84/148 (56.76%), Query Frame = 1
Query: 754 VFVHCGVDWGGSKFKLESRGYNEATFRVPDEKGYWPADAAIDENNPDITHVRETTLPIADTLRKLDEMGWGPDRVQESTCAGRFVCNYVYYTSLGLCEEASSAAAESGLPHNDGRHSLFVHVPPFSVIGKEEQLSFVADCLAAIAECL 1197
+H GVD F+LE G+NEA FRVPDE+G+ PA+ +ID N+ + +V T++PI + + L VQ S GRF+CNY+YY SL L +++ HSLFVHVPPF VI ++QL FV D L ++ L
Sbjct: 100 TLIHFGVDSNAQAFRLERCGWNEANFRVPDERGWQPANESIDANDTNSHNV--TSIPITNVVSNLSPK----HLVQPSDDPGRFICNYIYYHSLTLSKQSQGRV-----------HSLFVHVPPFHVISMDKQLEFVVDLLQNLSTTL 230
BLAST of mRNA_H-paniculata_contig1022.162.1 vs. uniprot
Match: B6T084_MAIZE (Pyrrolidone-carboxylate peptidase n=2 Tax=Zea mays TaxID=4577 RepID=B6T084_MAIZE) HSP 1 Score: 110 bits (275), Expect = 2.380e-23 Identity = 61/145 (42.07%), Postives = 80/145 (55.17%), Query Frame = 1
Query: 754 VFVHCGVDWGGSKFKLESRGYNEATFRVPDEKGYWPADAAIDENNPDITHVRETTLPIADTLRKLDEMGWGPDRVQESTCAGRFVCNYVYYTSLGLCEEASSAAAESGLPHNDGRHSLFVHVPPFSVIGKEEQLSFVADCLAAIA 1188
+ +H G + G +F LE+R NEATFR PDE G+ P I ++ +I H R+TTLP+ + + L +MG+ V S AGRFVCNYVYY SL E+ G SLFVH P F I +E Q+ FVA L +A
Sbjct: 91 ILLHFGANSGSHRFALENRAVNEATFRCPDELGWKPQRTPIISSDGNILHARQTTLPLKEISKSLQQMGYD---VMPSDDAGRFVCNYVYYHSLKFAEK-------------HGMTSLFVHFPLFLAIDEEVQMQFVASLLEVLA 219
BLAST of mRNA_H-paniculata_contig1022.162.1 vs. uniprot
Match: B4G1P8_MAIZE (Peptidase C15 pyroglutamyl peptidase I-like n=6 Tax=Andropogoneae TaxID=147429 RepID=B4G1P8_MAIZE) HSP 1 Score: 110 bits (274), Expect = 2.770e-23 Identity = 69/181 (38.12%), Postives = 91/181 (50.28%), Query Frame = 1
Query: 661 VAGISNGSESGGSGRLDP-----EXXXXXXXNRQISVFVHCGVDWGGSKFKLESRGYNEATFRVPDEKGYWPADAAIDENNPDITHVRETTLPIADTLRKLDEMGWGPDRVQESTCAGRFVCNYVYYTSLGLCEEASSAAAESGLPHNDGRHSLFVHVPPFSVIGKEEQLSFVADCLAAIA 1188
V G E+ G G L P E ++ + +H G + G +F LE++ NEATFR PDE G+ P I ++ I H R+TTLP+ + + L +MG+ V S AGRFVCNYVYY SL E+ H G SLFVH P F I +E Q+ FVA L +A
Sbjct: 48 VLGSCTVLEAAGQGALGPLYELLESTVSGRERQERVILLHFGANSGSHRFALENQAVNEATFRCPDELGWKPQRTPIISSDGSILHARQTTLPVEEISKSLQQMGYD---VVPSDDAGRFVCNYVYYHSLKFAEK-----------HGIG--SLFVHFPLFLAIDEEVQMQFVASLLEVLA 212
BLAST of mRNA_H-paniculata_contig1022.162.1 vs. uniprot
Match: UPI000C1D6936 (uncharacterized protein LOC111411768 n=1 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1D6936) HSP 1 Score: 110 bits (274), Expect = 2.920e-23 Identity = 63/150 (42.00%), Postives = 82/150 (54.67%), Query Frame = 1
Query: 739 NRQISVFVHCGVDWGGSKFKLESRGYNEATFRVPDEKGYWPADAAIDENNPDITHVRETTLPIADTLRKLDEMGWGPDRVQESTCAGRFVCNYVYYTSLGLCEEASSAAAESGLPHNDGRHSLFVHVPPFSVIGKEEQLSFVADCLAAIA 1188
N + +++H GV+ G ++F +E R NEATFR PDE G+ P I + I+ +RET LP+ D L +MG+ V S AGRFVCNYVYY SL E+ +G SLFVHVP F I KE Q+ F A L +A
Sbjct: 83 NPRRIIWLHFGVNSGATRFAIEHRAVNEATFRCPDEMGWKPQKVPIVPADGAISRIRETCLPVEDITNALAKMGY---EVTTSDDAGRFVCNYVYYHSLRFAEQ-------------NGIKSLFVHVPLFLTINKETQMQFAAALLELLA 216
BLAST of mRNA_H-paniculata_contig1022.162.1 vs. uniprot
Match: A0A7N2L473_QUELO (Uncharacterized protein n=3 Tax=Fagaceae TaxID=3503 RepID=A0A7N2L473_QUELO) HSP 1 Score: 110 bits (274), Expect = 3.230e-23 Identity = 59/145 (40.69%), Postives = 83/145 (57.24%), Query Frame = 1
Query: 754 VFVHCGVDWGGSKFKLESRGYNEATFRVPDEKGYWPADAAIDENNPDITHVRETTLPIADTLRKLDEMGWGPDRVQESTCAGRFVCNYVYYTSLGLCEEASSAAAESGLPHNDGRHSLFVHVPPFSVIGKEEQLSFVADCLAAIA 1188
+++H GV+ G ++F +E + NEATFR PDE G+ P I + DI+H R+T+LP+ + + L +MG+ V S AGRFVCNYVYY SL E+ +G SLFVHVP F I ++ Q+ F A L +A
Sbjct: 92 IWLHFGVNSGATRFAIEHQAVNEATFRCPDELGWKPQKLPIILADGDISHTRQTSLPVEEITKALAKMGY---EVMTSDDAGRFVCNYVYYHSLRFAEQ-------------NGNKSLFVHVPLFLTIDEDTQMQFAASLLEVLA 220 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1022.162.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1022.162.1 >prot_H-paniculata_contig1022.162.1 ID=prot_H-paniculata_contig1022.162.1|Name=mRNA_H-paniculata_contig1022.162.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=993bp MMAEHDILAARLRSGSSGVAHVNNRSRVADRQRHAALPSSFSPPVAFHVTback to top mRNA from alignment at H-paniculata_contig1022:21725..27326+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1022.162.1 ID=mRNA_H-paniculata_contig1022.162.1|Name=mRNA_H-paniculata_contig1022.162.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5602bp|location=Sequence derived from alignment at H-paniculata_contig1022:21725..27326+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1022:21725..27326+ >mRNA_H-paniculata_contig1022.162.1 ID=mRNA_H-paniculata_contig1022.162.1|Name=mRNA_H-paniculata_contig1022.162.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=5958bp|location=Sequence derived from alignment at H-paniculata_contig1022:21725..27326+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |