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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
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| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 1067 |
| Cds size | 819 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1258.1617.1 >prot_H-paniculata_contig1258.1617.1 ID=prot_H-paniculata_contig1258.1617.1|Name=mRNA_H-paniculata_contig1258.1617.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=273bp
MPPELPWHNQRFTSAGWMENAGLTLGRPKTKRGGGVRRATAGAAAMTAEV
KQRPNRRARLLRRTPPVIRACCGGVFRVVAVAALSLSCLETAHASDAIDG
GFGFHSGPMPKPAGGAQQRQEKSDQLARDRDRHERTPPAEQGLLRGKFID
AGLTREEKAVDYYLQGDGPVMGVSEVVMARQEAIGRYSSGEKHRRRMTRS
VADGVGGVVPKGVLDVKMNPRSPLENERSSTSADDDEVDVKEEEEPYKML
LLAIYIVVGCGVGTLVMLCVIRK back to topmRNA from alignment at H-paniculata_contig1258:894..8878- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig1258.1617.1 ID=mRNA_H-paniculata_contig1258.1617.1|Name=mRNA_H-paniculata_contig1258.1617.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7985bp|location=Sequence derived from alignment at H-paniculata_contig1258:894..8878- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTACGTCGTTAATGGCCACCTCGTGACTCCTTGGAAGCAGCACACTATCA
TCCTCGAGAAGAAGTGAGTAGTGTTTTTTGTGTTGAAGGCAAACTTTACT
CGATCAGCAACTCGAACCACACAGAGAAACAGTAGTAGAGGGCTTCAGTG
CTGAACCCAACTATTATCCATTTTTTCTTTTGAACATCACTTTGTTGTTG
AAACGGTGTGTGTCACACCGAACGAGTAGGCACAGCAGGTCAAGTAAATG
CCTCCAGAGCTTCCGTGGCACAATCAGCGGTTCACGAGTGCGGGATGGAT
GGAGAATGCTGGGCTGACACTTGGTCGACCCAAGACTAAACGTGGTGGTG
GCGTAAGACGAGCGACAGCAGGAGCAGCAGCGATGACAGCCGAAGTAAAA
CAACGTCCCAATAGAAGAGCTCGTCTTTTGCGAAGGACACCGCCCGTGAT
TCGAGCCTGCTGCGGAGGCGTATTTAGAGTGGTAGCGGTAGCCGCACTGA
GCTTGAGTTGTCTGGAAACTGCTCATGCGTCGGATGCGATTGATGGCGGG
TTCGGGTTTCATTCTGGGCCGATGCCAAAACCAGCGGGAGGTGCACAACA
ACGACAAGAAAAGTCGGATCAACTTGCACGTGACCGAGATCGCCATGAGA
GGACTCCTCCAGCCGAACAAGGGTTGCTAAGAGGAAAATTTATCGACGCC
GGCTTAACACGAGAAGAAAAAGCTGTGGACTATTATCTTCAGGGGGATGG
GCCAGTGATGGGAGTGAGTGAGGTGGTTATGGCTCGACAGGAGGCAATAG
GGCGGTACTCATCTGGAGAAAAGCACAGGTGAGTGACTGGTGGACTAGTT
GTGGTGTATTGTTCGCGGGACTGCCTTTATTTTCGGACTGCAAACAGATG
AATGGGAAATATGTGTCGGGTTTTCGAACATGTTATTCTTCCGACCATGC
AAAGCGGTAGGTGGTGGGTATGGGAAGTGCATTAAGGTTAGGGTAAGTGA
AACATTTGCTTGTCTAGATCTCTACTCACGCTTTGCTGGCATTGATCTCC
TCTACACTGCTCGCTTGTAACAGATGGTTACTACCTAGTGCCTGTCTTGC
TCCATATGTACAGCTATCGGCACGATCAATGTTCACGTTCTCTCAGAATT
ATATACAAAGCAAGGTCAAGGATTGTACTACTGTCCTGTACGCAGGTAAA
AAGGCAGTCGGTCAATGCCTAGGGTTACCATAATACTGCGTAGTCAGTCC
GTTGCAATCAATACAAATCAGCCCTGATCGGTAGGTTTACAGGGCTAGAG
TGTGCTGAATTGGGGCAGAAATGGTCTGTAATATCTGTCTTCTCGAGCAC
CACGAGATTATCAGTTTAACTCTCATCCATCATCTATCTGTCGATTAATG
GTGTTCTACAGTCATTCGGTGCCAAGCACAATCAGTAGTGTACGACAGTT
ATTGTGCACATGCAATGAGAGGAAGAAGCAGGTCGTAGGGTTGGTCGTTA
CTAAAAATAAAAGGCGCGGGACGCACATATTGCAACAAATAGACGACACC
ATCTGCATATAATTGGACACAAGCCTCCTACAGTAATCGGGAAAGCTTCA
TTTACATGACGGGTTTTTCCACATGAAATCCCGCTGCGAGGGGTGCAAAG
GTTTTCTGATTAGAAAAAAGTGAACGAGTTTAACGTTAGTGATCAACTTT
CGGTTTTCGCCATGTGTTCTATGTTTGACAGGATTTTCTCCCCAACACTC
GAGTCCGATCGCTCAGACTCGCGACCAGAGAACAGGAGCCCCCTACAGGC
ACACTGTACACCTCGTGGTCAAAATAATGGTTTACAAAATTTATCCGACT
GGGAAGTTGCGGGTTCAATCCTTTGTACCGTGTACTGGCAGTTTTTCTTG
CCGATTGTTTCCGGGAAAAATGTTGGTACGCGGCGATAAAAGAGATGCCT
GTGAAAGAGATAATACTCTCCTCATGAAAAAAACGCTATCAACTCCAACG
AGTGGGAGTGCAGCTCCCCCACCGAACGATAGTAAATTGGGAAGAAGGGA
GGCACTACACGCCGAGCTTGGGGTGAGGGGTCTCAACAGGAGAAAAAGTC
AAAACTAACGAGCATACAAAACTACCACGCTATCCATTCGTATGGCAAAC
GCACACCCCGCAGGTAGCAACTAATTGCCTGGCAGATGGCTACGTCTATG
TATCCCCTGTGCAGGGATTGAAAGGCAGCTCTACTCTCCCAATTACCCTT
CGTGCCAATACAGATTTAGTCAGATGTAGGCCCTGTCAACGCACACAAGG
GTCTGCTGGTATGGGTTAGGGTTTTTATTGTTCGGATAGGGTTGGGTTTG
GGTAGCTGCCGTGACCTGTGTGAAAATCCGAAATTGAGTTTCTCTCTAGA
GCTGCTTATCCACTCCTCCCAGGAACTATGTAGTAGCGGCTCTGGCTAGT
AGCATAGACAGGTTCGGAAATATGGTGTTGTAAGTTATTACTATATATTT
GAAAATTGAAATAGCGCTACTGACAGTATCGTATCGGGCATGAAAACTTG
ATCCAGGGGCATAACAGCGGTGTGCAAATACGCTTATTTTATGTATGATA
CAAACAAACAATGTGTATTTCTCGACCATACCACATTTCCGATCCATTTT
CCCTCTGCGCTCCCTTTTTACCTTTTTTGGAAGCGTCCCTTGCCGTCGCC
GTCATGAAACGCTTTATTATTTTTCCGAACTTGAAGGAGGGATGGATGGC
GGTGAAACAAAACACCTATCTCAACCATGGAGGACAAGGGAGCAAAACTA
GAGTCGGCGGGAAATCTGAAAATTTACCTAGCAAATCGTAGACCTCACTC
GAGATGAAAGTGTCCTCCATTGCAATGCTTGCCCTGTAAACATCAGTCCG
ATCACTAAATGCACACACCACTGATGGCCATGGAGCTTGACCATATCAAG
GAGAGAGCGGGGCCGGGAAAACTCAAAGTTCACTCGGCCAATCGTGAGAG
TGACACACAAGTATGATACACGCGTGGGACACATGACTCAGTAGGCTCGG
CTTTCTCCGGACTGGTTAATCTAAAACGGTGACGCAAAGCACAAGTGCAG
CTCAGTTGCACGCAGTACTCAGAACGGCTCGCCGCTTGTTCGCCGACTCC
GCCGTCAGGTAGCCTGAATTTACCGAAATACGAGGTGCTTCGGATGAGTG
AAATTGGTTAAAGTCAGGGCAAGCAAGAACAGTAACAAGCGTGAGAGATC
ATGGTCTTTTTTGGGCTTGTCACTCCGAGCAGTCATTGTGTTGCGCACCG
TAGGTGTGTAGGACATATGGTAAAAATGCTGTATGCGTCAACTACAGACT
GTCATTTCGGGTGTTCGCCCAGTCTTCCGGGTCTGAGTCGGCGAACAAGC
GGCGAGCTAAAAACTCGCCATCATGCCTTGGTCCCAAATCGTCAGTGTAC
ACATTAGTTGTCGCGCAACGCTGCACGAGCTAGACAGTAAAAGTTGGAGG
TATGTTCTACGTTTTATCTAATTTGCATAGTCAGTTCCAGAAAAGGTTTT
TCCGTCCGGCATTGACGCCCAGTCTTACTGCTTTTACCTCCTGATCGAAA
TCCGCGTTTCCCCGTCCCATGATTTTTATTTGCCCGTCCCACCTCCACTT
CCCAGGCCTGCTGATACACGTTAATTTCACCCTTGTATGGTCCATTTACT
GTCGTGCCCTCTTGAGCCTGGGCCTAGGGTTAACCTGTCACACGCTGGTT
TGCAGAAAAGGATGACATCTATAGTTGAGTTTAGGATTTTTTTTCACTGT
ATTGGTGTTGCCTCCTTCAGAAAAGGAGAAACCCCTTTCGCTCCTCGCCT
CCCAGACATGATTGTGCCCTTGAGGAATTGTCCTGTCTGCTTTTACTTCT
AATGACAAATTTTACTGATGGCCCATCAATGAGCACGTGGGCAACGCCTG
GACAGGAATGCGATCAAGAGAGCATACTTGTACATGTCCGAGGACTAATT
TGTCGTCTGAACCGACTTACTTGACGGTGTTACCTCTTGACACCGAAATC
TCGATCCTCGACAGGGGTCAAGTTGAGGATTAACTCGGCTGTAACGTACA
TAACTTATTCTCATGCACGACCCCAAAGCGTAGAGTGTTGCTAAGACTGG
CGAAAACAAAAAGAGCTCCATTTCCTACTAGGGAACAAGGGGTCATAATT
GGTCGTTTCGGAGTAGTCACCAGTTGTTGAATGGTGTTTGCGCAAGAATA
ATTCATTTTGCCGATTTCGATTTGGGTGTATATAGCTAACAGTGAGCTCG
TCGTCCAGGATCCCAGCTTACCCATGCCAATGTGTCGGTACGGTAGGAAT
CCATTTCAAAATTCGTCTGTTACGTGAGTAATACGTAAAGTCATTGGTTG
TGACAAAAAAGTTCGTCTTGTAACGAGACGTTGTGCAGGTGGACTGGGGT
TCAGAACGAGAAGCTCTCTGTAAGCTACACACGACGAAATAAAAATTTGC
CAAGTAAAAAATTTTGAGCGAAAACTCCCATGTGTGCATACATTTAATGC
TTTGGACCCTAGAATATATAGATCTTAATACAAGGAACAACTTTTTTTCA
GGAAGGCCAACGCCGAAGTACCAACAGCACCATAACTCGCACTGTCGTGT
TCCACCTGCGACGACTGTGGTGCCCTGCCCTTTGTTGTGTGTGGGTAACG
TCACGTATAACTGGATGCCGTACATGCAGCAGCTGTGGGTTGCTAGGGAA
CTCTCGGGAGATTCCGGTGCCTACCAACCTATCTCCCTTTCATCATATTC
CTATTTCCACCAGTACTGTCACCAGCCAGATAATTAGATGTGCGTTGTGC
TCTAGCAGCACACAAACTATTGGATGCGTTCTACTTCAATCCCTGTCCCT
TCCGTGGCCGTGCGCATTGCTTGCGCCGTCCAGCTGGCTACCACCGCTCA
ATGGAGCCAATGTGTATGGCAATTGATGTGCTACCTTCACATCAATTGCC
AAGCACATCGCGTTGTAGCTGCAGCAGACGAGTTGTGGACGCGCAGTAGT
TGTAACGAAGATCGTCACTTTGACCTCTTTCGTTCTAGAGTCCCTGGGTG
CTGTTCATCTCGTGCTATATTTCTGGTTTCAATTTGCGTCATAATATTGA
TCTCGTGGTACTGAACATGATGTCTTCCTCGGTGACACAAATTTTCAAAT
TTTGTCCGTCCCAAATCGGTACCCTCCCCTCAAAATGCCCCCCCCCCCCT
CCCACATACACACATCTTGGGACATGGGACTGTGAGATTACGCTTATCAC
AAAATGCCACACTACAGGCCCCCAGGAGTTACGTCATTCAGCGCCCAAGG
TGTACATTTAGTTTCGCCTTAGGGTCTGATCATGAGATGCTTTCGTCGGA
AATTCGACAATGTAGTGATAGCTGTGACGCTAGTTACACTCGAGGTAAAC
TCTCTATTACCACGGCTAGTTAGTGTGAAAGTTGATTTTCGCCCACGACA
GTGACCTTAGAAACCATGTCTACTTTTGTCACACAGCGAGAGAAATACTC
AATCCTCAGATGAAAGACAGGCCATTCCCACACACTGTACGATTTGAAAG
AGGGATAAAGAATGTACTATGTGCTATGTACCAAGTCGCAGGTGCCATGA
TGCCCCATTTTATCATTTTCCCATGCTCTTCTTGCCTCCGCGTTCTATTA
TGCCTCACCAGCCTGTCTTTCTCTTTATTCCCCCCGTATCTTCGGTTGCA
ATGCAATGAGCATTTTCTTCCATTTCTGGTCATGGTATATGAAAGCACAT
TAAAATGAATGAAGTGTGCTACATGCTTTGTTACGAGCTGGGCCCGCCCG
TCAAGAAAGGACAAAAAACAGGAACAGCCCCGCAAGCGGCCAAGCATGAA
CTAATGTGTTCCGTCCTGCAATTATGGTGCCTTCCCAGAAACTGTGGAAG
CGCCCTGGAGTGCACTGCGCGATCAGATCGGCCATCCGGGTACTGTCAAC
ATTTCACCCTATATGATGGATATATGTACTGCCGGTCACCGGCTACGAGG
GGTGAATTTCAAGTTTTTCTTTTACATGAACAGGCATTGCACATGTGTTC
TTTAGACCCTGTGTTATGAACCAGTTCGCGTATGGTTATATGTGAGAATT
GTCGTTTAACCGGGCAGTTCGCTCATGGACACGGGATAATTTTCATTCTG
CCGCCGGTTTTCCGTGTGGTCATGATGTGTGATTTTTGTCGGGTTTGTGG
TTGGCCATGTTACATCATTTTCTCCTCCTGTGATTTTTTTTTTCTGTTCA
ATCTCCATTTTTTTTTAGAAAAATGACCCTTGACAGCAGAATGCGCATGC
ATGTGCATCTCATCTAGAGCTCTCGACAATATATTTCCGACGGCATAATT
TTTCGTTGATCACGACCAAAATTGTGTAGGGAGAAAGAATTGAGTTGATC
AAATAAAAACTGTTTCTCTACATGATTGGGCACTACGCGTGTCTTTTTCA
CACGATGTTATGATACGGTTAGCTGATGGTCATCTGAGAAATTACCGGGC
TTGTGAGAGGGCTTGAAGAATGAAGATAATTGAGTTCGTGTCTGATGGTT
TTAATTTTTTTCTGTACGTACTGCTGACAATCAGAATAATGTGTGTTTCG
ACTCCCAAGGTATCGCCGTTCCAAAGTTAATATACCAGGTATGTAATTTG
GACGTCCTTACTGTTTCTTTCCACCCCAGAGTGTACACCCTCTGTATGCA
CCACTCGGAAGCGTTGTGAGGGAAGGAGCTTAAGCACGCGGGGTATAGTA
TCGTATCGGTCCTCCCTTCGGTTCATCACTTATAAACCGAGGAAATATTG
TGGGATAGCCGTTGTACGTGACTTGGCCGTTTTGACATTCGGTTTTAGAC
TGCACGAGAAAGTACAGAATCCTCACACGTTACGTCCTTACTGTTGTTAC
TCATTTCAACTTTAATCGACCGTTCCCATTCCAATTTTGAGAGTTTTGAC
ATGAACGTTCACGAAGATGAGCGCATCGTACATTTCGAGACTTTAACGGT
GGGAATTTTCTGTGTATGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTT
TTTCACTTCATTTCGATTTTGTGGATATACCGTCGTTTTAGACCAAATAT
GCCAAATTTGACTCAACGGCTATATCTGATTTCAATAGTGAGAAATTTGA
TCTGAAATTTTAAGGAGAGAGCGCATCAACATGGGGCTTTCACACTCCCC
CCCCTTTTTAAAGGAGACATGAACAAAACTACCAACCAAAGAGTCATAAA
TTCCACGTAAAATCGCAACAATATAAAATCCGTGAAGCTTCGGTATTGAC
GATGCGTTTATTTCCCGTTTCCTCCAAATCTCAAGTCAAAAATCCCCAAA
ATTAGAGTGAGAATTTGCGTAGAATTCTATGTTGCTTACCTTACTGGGCT
CAGCCTGGAGGGTCATGCTCCGGCTTGATAGTTTTCATCTTCCAAGCAGG
ATCCCATGCGTATTGTAGCGCCCCTTCACCCCACTTCGGCCTGTCCATCC
CTGGACCTGCGTTGAATCGCACAGTTCAAAAATCACATTGAACGGATCAG
TCCGTAAGTAGCCATTACCCCGGGAACAAAGAGCGACCAAGAAGAAACGC
CTGTCCTAAGATGGCAAAAGTGAAGAGCGATGAACACCAAAAGAACAAGT
CCTTCCATCTCCCACCAAACCCTAACCGCGCGGATTATTTATCACAGAAG
GAGAATGACGAGAAGTGTAGCCGATGGGGTTGGCGGCGTGGTCCCCAAAG
GTGTATTGGATGTCAAGATGAACCCGAGGTCTCCTCTTGAGAATGAGAGG
TCGAGCACTAGTGCGGATGATGATGAAGTTGATGTGAAGGAGGAGGAGGA
GCCGTATAAGATGCTCCTCTTGGCGATTTACATCGTCGTCGGGTGTGGGG
TGGGCACACTTGTTATGCTCTGCGTTATCCGAAAG back to topCoding sequence (CDS) from alignment at H-paniculata_contig1258:894..8878- >mRNA_H-paniculata_contig1258.1617.1 ID=mRNA_H-paniculata_contig1258.1617.1|Name=mRNA_H-paniculata_contig1258.1617.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1638bp|location=Sequence derived from alignment at H-paniculata_contig1258:894..8878- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCCTCCAGAGCTTCCGTGGCACAATCAGCGGTTCACGAGTGCGGGATG
GATGGAGAATGCTGGGCTGACACTTGGTCGACCCAAGACTAAACGTGGTG
GTGGCGTAAGACGAGCGACAGCAGGAGCAGCAGCGATGACAGCCGAAGTA
AAACAACGTCCCAATAGAAGAGCTCGTCTTTTGCGAAGGACACCGCCCGT
GATTCGAGCCTGCTGCGGAGGCGTATTTAGAGTGGTAGCGGTAGCCGCAC
TGAGCTTGAGTTGTCTGGAAACTGCTCATGCGTCGGATGCGATTGATGGC
GGGTTCGGGTTTCATTCTGGGCCGATGCCAAAACCAGCGGGAGGTGCACA
ACAACGACAAGAAAAGTCGGATCAACTTGCACGTGACCGAGATCGCCATG
AGAGGACTCCTCCAGCCGAACAAGGGTTGCTAAGAGGAAAATTTATCGAC
GCCGGCTTAACACGAGAAGAAAAAGCTGTGGACTATTATCTTCAGGGGGA
TGGGCCAGTGATGGGAGTGAGTGAGGTGGTTATGGCTCGACAGGAGGCAA
TAGGGCGGTACTCATCTGGAGAAAAGCACAGATGCCTCCAGAGCTTCCGT
GGCACAATCAGCGGTTCACGAGTGCGGGATGGATGGAGAATGCTGGGCTG
ACACTTGGTCGACCCAAGACTAAACGTGGTGGTGGCGTAAGACGAGCGAC
AGCAGGAGCAGCAGCGATGACAGCCGAAGTAAAACAACGTCCCAATAGAA
GAGCTCGTCTTTTGCGAAGGACACCGCCCGTGATTCGAGCCTGCTGCGGA
GGCGTATTTAGAGTGGTAGCGGTAGCCGCACTGAGCTTGAGTTGTCTGGA
AACTGCTCATGCGTCGGATGCGATTGATGGCGGGTTCGGGTTTCATTCTG
GGCCGATGCCAAAACCAGCGGGAGGTGCACAACAACGACAAGAAAAGTCG
GATCAACTTGCACGTGACCGAGATCGCCATGAGAGGACTCCTCCAGCCGA
ACAAGGGTTGCTAAGAGGAAAATTTATCGACGCCGGCTTAACACGAGAAG
AAAAAGCTGTGGACTATTATCTTCAGGGGGATGGGCCAGTGATGGGAGTG
AGTGAGGTGGTTATGGCTCGACAGGAGGCAATAGGGCGGTACTCATCTGG
AGAAAAGCACAGAAGGAGAATGACGAGAAGTGTAGCCGATGGGGTTGGCG
GCGTGGTCCCCAAAGGTGTATTGGATGTCAAGATGAACCCGAGGTCTCCT
CTTGAGAATGAGAGGTCGAGCACTAGTGCGGATGATGATGAAGTTGATGT
GAAGGAGGAGGAGGAGCCGTATAAGATGCTCCTCTTGGCGATTTACATCG
TCGTCGGGTGTGGGGTGGGCACACTTGTTATGCTCTGCGTTATCCGAAAG
AAGGAGAATGACGAGAAGTGTAGCCGATGGGGTTGGCGGCGTGGTCCCCA
AAGGTGTATTGGATGTCAAGATGAACCCGAGGTCTCCTCTTGAGAATGAG
AGGTCGAGCACTAGTGCGGATGATGATGAAGTTGATGTGAAGGAGGAGGA
GGAGCCGTATAAGATGCTCCTCTTGGCGATTTACATCGTCGTCGGGTGTG
GGGTGGGCACACTTGTTATGCTCTGCGTTATCCGAAAG back to top
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