mRNA_H-paniculata_contig814.16159.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig814.16159.1 vs. uniprot
Match: A0A6H5JW47_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW47_9PHAE) HSP 1 Score: 171 bits (433), Expect = 4.630e-50 Identity = 93/207 (44.93%), Postives = 129/207 (62.32%), Query Frame = 1
Query: 1 FRATVVCLLWLATMIRPDIANAVRAVARYSHNHSTRHLAGVLKIMSCLNKNRSLGLTFAWESRLELD--LYADADFAEKSLDRHSVTGMAVMLGGLAVSFSSSTQHCVTVSTTEAEYLALWEAAKQGLYVKGVLAFLQTELYGIGIRLFEDNAGAQSLAENSRSSSQTRLIDVGYNFIRDLVRAGQVSVHHVDSKYQHADILINALP 615
FR V CL+W+A RPDI+NAVRAVAR+SH H KI++ L L L F +S +++ +Y ADFA K+ DR SV+G V + G+ V ++S TQ CV ST+EAEYLA+ + K+ L+ G+L FL+ I++ EDN GA +LA+N SS + + IDV ++F+R L G++ + HV SK QHADIL ALP
Sbjct: 11 FREVVGCLMWIACQTRPDISNAVRAVARHSHEPKLSHWKAAQKILNYLLGTAHLSLNFKRDSSVDVGTLVYVAADFASKATDRRSVSGALVFVAGMLVVWTSRTQKCVAQSTSEAEYLAMGDGVKEALFEDGMLQFLRPSEKSREIKVLEDNEGAIALADNPLSSGRRKHIDVRHHFLRSLTEEGRIKISHVSSKEQHADILTKALP 217
BLAST of mRNA_H-paniculata_contig814.16159.1 vs. uniprot
Match: A0A6H5L589_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L589_9PHAE) HSP 1 Score: 173 bits (439), Expect = 2.890e-49 Identity = 88/202 (43.56%), Postives = 135/202 (66.83%), Query Frame = 1
Query: 4 RATVVCLLWLATMIRPDIANAVRAVARYSHNHSTRHLAGVLKIMSCLNKNRSLGLTFAWESRLELDLYADADFAEKSLDRHSVTGMAVMLGGLAVSFSSSTQHCVTVSTTEAEYLALWEAAKQGLYVKGVLAFLQTELYGIGIRLFEDNAGAQSLAENSRSSSQTRLIDVGYNFIRDLVRAGQVSVHHVDSKYQHADILINA 609
R + ++W++T RPDI AVRAVAR++H + RH ++KI++ L + R LG+T+ S L L++Y DA +A+ DR SV+G+A +GG +S S TQ V++S+TEAEY+A E K+ L+V+ VL+F+ E G I++ EDN GA +L +N SS++++ IDV Y+FIR L R+G++S+ V + QHAD+L A
Sbjct: 163 REAIGSMMWVSTFTRPDICFAVRAVARHAHAPAERHWKAIVKILAYLKETRDLGITYKRGSGLGLEVYVDASYADAE-DRRSVSGLATTVGGTVISHGSKTQAIVSLSSTEAEYIAAGEGVKEALFVRAVLSFIAPETSGSSIQVLEDNQGAMALVQNPLSSARSKHIDVRYHFIRGLFRSGEISIKFVSTSEQHADVLTKA 363
BLAST of mRNA_H-paniculata_contig814.16159.1 vs. uniprot
Match: A0A6H5JTP8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTP8_9PHAE) HSP 1 Score: 170 bits (431), Expect = 4.780e-49 Identity = 93/207 (44.93%), Postives = 132/207 (63.77%), Query Frame = 1
Query: 1 FRATVVCLLWLATMIRPDIANAVRAVARYSHNHSTRHLAGVLKIMSCLNKNRSLGLTFAWESRLELD--LYADADFAEKSLDRHSVTGMAVMLGGLAVSFSSSTQHCVTVSTTEAEYLALWEAAKQGLYVKGVLAFLQTELYGIGIRLFEDNAGAQSLAENSRSSSQTRLIDVGYNFIRDLVRAGQVSVHHVDSKYQHADILINALP 615
FR V CL+W+A RP+ +NAVR VAR+SH KI+S L + L L + ++ +++ +Y DADFA K+ DR SV+G V + G VS+ + TQ CV++ST+EAEY+A+ + K+ L+V G+L FL+ I +FEDN GA +LAEN SSS+++ IDV ++F+R+L G + V HV SK QHADIL ALP
Sbjct: 68 FREVVGCLMWIANNTRPETSNAVRTVARHSHEPKKSDWKAAQKILSYLKETAHLTLKYKQDTTVDVGTLVYVDADFASKATDRRSVSGALVRVAGCLVSWFAWTQKCVSLSTSEAEYIAMGDGVKEALFVNGMLQFLRPSAKPRKIDVFEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKVQHADILTKALP 274
BLAST of mRNA_H-paniculata_contig814.16159.1 vs. uniprot
Match: A0A6H5KCG6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCG6_9PHAE) HSP 1 Score: 169 bits (428), Expect = 5.250e-49 Identity = 95/207 (45.89%), Postives = 132/207 (63.77%), Query Frame = 1
Query: 1 FRATVVCLLWLATMIRPDIANAVRAVARYSHNHSTRHLAGVLKIMSCLNKNRSLGLTFAWESRLELD--LYADADFAEKSLDRHSVTGMAVMLGGLAVSFSSSTQHCVTVSTTEAEYLALWEAAKQGLYVKGVLAFLQTELYGIGIRLFEDNAGAQSLAENSRSSSQTRLIDVGYNFIRDLVRAGQVSVHHVDSKYQHADILINALP 615
FR V L+W+A+ R DI+NAVRAVAR+SH H KI++ L + L L F +S +++ +Y DADFA K+ DR SV+G V + + V + S TQ CV+ ST+EAEYLA+ + K+ L+V G+L FL+ + I + EDN GA +LAEN SSS+++ IDV ++F+R+L G + V HV SK QHADIL ALP
Sbjct: 36 FREVVGSLMWIASQTRADISNAVRAVARHSHEPKKSHWKAAQKILNYLLETAHLTLKFKRDSSVDVGTLVYVDADFASKATDRRSVSGAMVFVAAMLVVWISRTQKCVSQSTSEAEYLAMGDGVKEALFVNGMLQFLRPSVKPRKIDVLEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKEQHADILTKALP 242
BLAST of mRNA_H-paniculata_contig814.16159.1 vs. uniprot
Match: A0A6H5JTK6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTK6_9PHAE) HSP 1 Score: 169 bits (427), Expect = 1.660e-48 Identity = 97/206 (47.09%), Postives = 134/206 (65.05%), Query Frame = 1
Query: 1 FRATVVCLLWLATMIRPDIANAVRAVARYSHNHSTRHLAGVLKIMSCLNKNRSLGLTFAWES--RLELDLYADADFAEKSLDRHSVTGMAVMLGGLAVSFSSSTQHCVTVSTTEAEYLALWEAAKQGLYVKGVLAFLQTELYGIGIRLFEDNAGAQSLAENSRSSSQTRLIDVGYNFIRDLVRAGQVSVHHVDSKYQHADILINAL 612
FR + L+WLAT RPDIANAVRAVARY + H L I+ + + LG+TF S L ++++ADAD+A K+ DR SV+G VM GG +S+ S TQ CVT+STTEAEY++L + K+ L+++ V F+ E I + EDN GA LA+N S+S ++ IDV ++FIR+LVR ++S+ HV+S YQHAD L AL
Sbjct: 33 FRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFADADYASKAADRRSVSGGLVMCGGGCMSWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVRRFVLPEAGMPCIPVLEDNQGAIQLAQNPISNSTSKHIDVRHHFIRELVRRKEISIFHVESAYQHADFLTKAL 238
BLAST of mRNA_H-paniculata_contig814.16159.1 vs. uniprot
Match: A0A6H5JRE7_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRE7_9PHAE) HSP 1 Score: 169 bits (429), Expect = 1.020e-47 Identity = 93/207 (44.93%), Postives = 132/207 (63.77%), Query Frame = 1
Query: 1 FRATVVCLLWLATMIRPDIANAVRAVARYSHNHSTRHLAGVLKIMSCLNKNRSLGLTFAWESRLELD--LYADADFAEKSLDRHSVTGMAVMLGGLAVSFSSSTQHCVTVSTTEAEYLALWEAAKQGLYVKGVLAFLQTELYGIGIRLFEDNAGAQSLAENSRSSSQTRLIDVGYNFIRDLVRAGQVSVHHVDSKYQHADILINALP 615
FR V CL+W+A RP+ +NAVR VAR+SH KI+S L + L L + ++ +++ +Y DADFA K+ DR SV+G V++ G VS+ S TQ CV++ST+EAEY+A+ + K+ +V G+L FL+ I +FEDN GA +LAEN SSS+++ IDV ++F+R+L G + V HV SK QHADIL ALP
Sbjct: 163 FREVVGCLMWIANNTRPETSNAVRTVARHSHEPKKSDWKAAQKILSYLKETAHLTLKYKQDTTVDVGTLVYVDADFASKATDRRSVSGALVLVVGCLVSWFSWTQKCVSLSTSEAEYIAMGDGVKEAFFVNGMLQFLRPSAKPRKIDVFEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKEQHADILTKALP 369
BLAST of mRNA_H-paniculata_contig814.16159.1 vs. uniprot
Match: A0A6H5JKS3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKS3_9PHAE) HSP 1 Score: 177 bits (448), Expect = 1.230e-47 Identity = 90/203 (44.33%), Postives = 137/203 (67.49%), Query Frame = 1
Query: 4 RATVVCLLWLATMIRPDIANAVRAVARYSHNHSTRHLAGVLKIMSCLNKNRSLGLTFAWESRLELDLYADADFAEKSLDRHSVTGMAVMLGGLAVSFSSSTQHCVTVSTTEAEYLALWEAAKQGLYVKGVLAFLQTELYGIGIRLFEDNAGAQSLAENSRSSSQTRLIDVGYNFIRDLVRAGQVSVHHVDSKYQHADILINAL 612
R + CL+W AT RPDIA A+ AV R +H + R +++I+S LN LG+T+ S L+L++Y DA +A++ R SVTG+AV +GG VS +S TQ V++ST+EAEY+A E K+ L+V+ VL+F+ E G I++ EDN GA SL +N SS++++ IDV ++FIR+L ++G++SV ++ + QHAD+L AL
Sbjct: 1027 RQAIGCLMWPATFTRPDIATALNAVQRNAHAPTMRDWKALVQILSYLNATMDLGITYVRGSGLDLEVYVDASYADRDTGRRSVTGIAVTVGGTVVSHASKTQRIVSLSTSEAEYIAAGEGVKEALFVRAVLSFIAPETSGAKIKVLEDNQGAISLVQNPFSSARSKHIDVRFHFIRELFKSGRISVEYIPTDEQHADLLTKAL 1229
BLAST of mRNA_H-paniculata_contig814.16159.1 vs. uniprot
Match: A0A6H5L175_9PHAE (Uncharacterized protein n=9 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L175_9PHAE) HSP 1 Score: 177 bits (448), Expect = 1.280e-47 Identity = 90/203 (44.33%), Postives = 137/203 (67.49%), Query Frame = 1
Query: 4 RATVVCLLWLATMIRPDIANAVRAVARYSHNHSTRHLAGVLKIMSCLNKNRSLGLTFAWESRLELDLYADADFAEKSLDRHSVTGMAVMLGGLAVSFSSSTQHCVTVSTTEAEYLALWEAAKQGLYVKGVLAFLQTELYGIGIRLFEDNAGAQSLAENSRSSSQTRLIDVGYNFIRDLVRAGQVSVHHVDSKYQHADILINAL 612
R + CL+W AT RPDIA A+ AV R +H + R +++I+S LN LG+T+ S L+L++Y DA +A++ R SVTG+AV +GG VS +S TQ V++ST+EAEY+A E K+ L+V+ VL+F+ E G I++ EDN GA SL +N SS++++ IDV ++FIR+L ++G++SV ++ + QHAD+L AL
Sbjct: 1580 RQAIGCLMWPATFTRPDIATALNAVQRNAHAPTMRDWKALVQILSYLNATMDLGITYVRGSGLDLEVYVDASYADRDTGRRSVTGIAVTVGGTVVSHASKTQRIVSLSTSEAEYIAAGEGVKEALFVRAVLSFIAPETSGAKIKVLEDNQGAISLVQNPFSSARSKHIDVRFHFIRELFKSGRISVEYIPTDEQHADLLTKAL 1782
BLAST of mRNA_H-paniculata_contig814.16159.1 vs. uniprot
Match: A0A6H5J8M4_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8M4_9PHAE) HSP 1 Score: 164 bits (416), Expect = 2.010e-47 Identity = 93/208 (44.71%), Postives = 131/208 (62.98%), Query Frame = 1
Query: 1 FRATVVCLLWLATMIRPDIANAVRAVARYSHNHSTRHLAGVLKIMSCLNKNRSLGLTFAWESRLE---LDLYADADFAEKSLDRHSVTGMAVMLGGLAVSFSSSTQHCVTVSTTEAEYLALWEAAKQGLYVKGVLAFLQTELYGIGIRLFEDNAGAQSLAENSRSSSQTRLIDVGYNFIRDLVRAGQVSVHHVDSKYQHADILINALP 615
FR V CL+W+A RPDI+NAVRAVAR+SH R KI++ L L L + +S ++ +Y DADFA K+ DR SV+G V++ V++ S TQ CV+ ST+EAEYLA+ + K+ L+V G+L FL+ + I + EDN GA +LAEN SS +++ IDV ++F+R+L G + + HV S+ QHADIL ALP
Sbjct: 17 FREVVGCLMWVANGTRPDISNAVRAVARHSHEPKKRDWKAAQKILNYLLATAHLTLKYKRDSTVDDVGTLVYVDADFASKATDRRSVSGALVIVAACLVAWLSWTQKCVSQSTSEAEYLAMGDGVKESLFVNGMLQFLRPSVEPRKIDVLEDNEGAIALAENPLSSCRSKHIDVRHHFLRNLTEEGVIEITHVPSEKQHADILTKALP 224
BLAST of mRNA_H-paniculata_contig814.16159.1 vs. uniprot
Match: A0A6H5KGI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGI0_9PHAE) HSP 1 Score: 168 bits (426), Expect = 2.780e-47 Identity = 91/203 (44.83%), Postives = 130/203 (64.04%), Query Frame = 1
Query: 4 RATVVCLLWLATMIRPDIANAVRAVARYSHNHSTRHLAGVLKIMSCLNKNRSLGLTFAWESRLELDLYADADFAEKSLDRHSVTGMAVMLGGLAVSFSSSTQHCVTVSTTEAEYLALWEAAKQGLYVKGVLAFLQTELYGIGIRLFEDNAGAQSLAENSRSSSQTRLIDVGYNFIRDLVRAGQVSVHHVDSKYQHADILINAL 612
R + +LW++T RPD++ AVRAVAR++H + RH + KI+ L R LG+T+ S L L +Y DA +A+ D+ SVTGMA +GG VS S TQ +++S+TEAEY+A E K+ L+V+ VL+F+ E G I++ EDN GA +L +N SS +T+ IDV Y+FI L R+G +SV V + QHAD+L AL
Sbjct: 168 REAIGSMLWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADTE-DKRSVTGMATTVGGTVVSHGSKTQSILSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIHGLFRSGDISVKFVPTTEQHADLLTKAL 369 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig814.16159.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig814.16159.1 >prot_H-paniculata_contig814.16159.1 ID=prot_H-paniculata_contig814.16159.1|Name=mRNA_H-paniculata_contig814.16159.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=205bp FRATVVCLLWLATMIRPDIANAVRAVARYSHNHSTRHLAGVLKIMSCLNKback to top mRNA from alignment at H-paniculata_contig814:7744..8358+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig814.16159.1 ID=mRNA_H-paniculata_contig814.16159.1|Name=mRNA_H-paniculata_contig814.16159.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=615bp|location=Sequence derived from alignment at H-paniculata_contig814:7744..8358+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig814:7744..8358+ >mRNA_H-paniculata_contig814.16159.1 ID=mRNA_H-paniculata_contig814.16159.1|Name=mRNA_H-paniculata_contig814.16159.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1230bp|location=Sequence derived from alignment at H-paniculata_contig814:7744..8358+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |