mRNA_H-paniculata_contig12571.1615.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig12571.1615.1 vs. uniprot
Match: D8LI84_ECTSI (WW domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI84_ECTSI) HSP 1 Score: 186 bits (471), Expect = 1.310e-53 Identity = 85/110 (77.27%), Postives = 100/110 (90.91%), Query Frame = 1 Query: 1 LLQETKGALRPRPSNWKSLLMSVLVLSSKVWDDNSMWNRDFSELCPFFTLARLNELEVAVLEVLRYNVKVLSSEYAKYYFHLRSMCVRGGLSEDHAPMHPFDMENVRVLE 330 L++ETKGA+RP+P NWKSL++S LVLSSKVWDDNSMWNRDFSE+ P F+L RLN+LEVAVL VLR+NVKVLSSEYAKYYFHLR+MCVRGGLS+ HAP+HP DME ++ LE Sbjct: 453 LMKETKGAIRPQPWNWKSLIISALVLSSKVWDDNSMWNRDFSEVFPSFSLGRLNQLEVAVLGVLRFNVKVLSSEYAKYYFHLRAMCVRGGLSDSHAPIHPLDMEGIKELE 562
BLAST of mRNA_H-paniculata_contig12571.1615.1 vs. uniprot
Match: A0A7S2SV86_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SV86_9STRA) HSP 1 Score: 140 bits (354), Expect = 1.320e-37 Identity = 62/106 (58.49%), Postives = 85/106 (80.19%), Query Frame = 1 Query: 13 TKGALRPRPSNWKSLLMSVLVLSSKVWDDNSMWNRDFSELCPFFTLARLNELEVAVLEVLRYNVKVLSSEYAKYYFHLRSMCVRGGLSEDHAPMHPFDMENVRVLE 330 TKG+++ RP+NWKSLL+S ++++SKVWDD SMWN DFS++CP FTL R+NELE+A+L+VL Y VKV +S+YAKYYFH+RS CVR GL+ D + P D+ + L+ Sbjct: 290 TKGSIQVRPNNWKSLLVSTMIMASKVWDDLSMWNADFSQVCPSFTLRRINELELALLDVLGYIVKVAASDYAKYYFHIRSYCVRLGLTHDLDSLAPLDLTGAKKLQ 395
BLAST of mRNA_H-paniculata_contig12571.1615.1 vs. uniprot
Match: A0A7S2I4W4_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I4W4_9STRA) HSP 1 Score: 139 bits (350), Expect = 1.690e-36 Identity = 66/113 (58.41%), Postives = 86/113 (76.11%), Query Frame = 1 Query: 1 LLQETKGALRPRPSNWKSLLMSVLVLSSKVWDDNSMWNRDFSELCP---FFTLARLNELEVAVLEVLRYNVKVLSSEYAKYYFHLRSMCVRGGLSEDHAPMHPFDMENVRVLE 330 L+++T G +RP+PSNW+S+L S +V+SSKVWDD SMWN DFS+ CP F+L R+NELE+AVL L+YNVKV +SEYAKYYF LRSM +R GL+ + P +ME V+ LE Sbjct: 375 LIKDTNGGVRPKPSNWRSILFSCMVMSSKVWDDLSMWNADFSQTCPRDVSFSLQRINELELAVLGCLKYNVKVTASEYAKYYFLLRSMLIRSGLAGEDMTNTPLNMEGVKKLE 487
BLAST of mRNA_H-paniculata_contig12571.1615.1 vs. uniprot
Match: A0A7S3DPP7_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DPP7_9STRA) HSP 1 Score: 132 bits (331), Expect = 5.460e-36 Identity = 66/114 (57.89%), Postives = 85/114 (74.56%), Query Frame = 1 Query: 1 LLQETKGALRPRPSNWKSLLMSVLVLSSKVWDDNSMWNRDFSELCPF---FTLARLNELEVAVLEVLRYNVKVLSSEYAKYYFHLRSMCVRGGLS-EDHAPMHPFDMENVRVLE 330 L++ T+G LRPR +NW+S+L S +VL+SKVWDD SMWN DFS+ CP FTL R+NELE+AVL+ L Y VKV +SEYAKYYF LRSM ++ GL ED M+P D++ R L+ Sbjct: 95 LIKNTRGNLRPRATNWRSVLFSCMVLASKVWDDLSMWNGDFSQTCPAGVTFTLQRINELELAVLDALEYIVKVPASEYAKYYFLLRSMLIKSGLGGEDLNEMNPLDVDGARRLQ 208
BLAST of mRNA_H-paniculata_contig12571.1615.1 vs. uniprot
Match: A0A7S2EB28_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EB28_9STRA) HSP 1 Score: 137 bits (344), Expect = 2.740e-35 Identity = 66/113 (58.41%), Postives = 85/113 (75.22%), Query Frame = 1 Query: 1 LLQETKGALRPRPSNWKSLLMSVLVLSSKVWDDNSMWNRDFSELCP---FFTLARLNELEVAVLEVLRYNVKVLSSEYAKYYFHLRSMCVRGGLSEDHAPMHPFDMENVRVLE 330 L+++T G +RPRPSNW+S+L S +V+SSKVWDD SMWN DFS+ CP F+L R+NELE+AVL LRY+VKV +SEYAKYYF LRSM +R GL+ + P + E V+ LE Sbjct: 543 LIKDTNGGVRPRPSNWRSILFSCMVMSSKVWDDLSMWNADFSQTCPRGVSFSLQRINELELAVLGCLRYSVKVTASEYAKYYFLLRSMLIRSGLAGEDMTNTPLNAEGVQKLE 655
BLAST of mRNA_H-paniculata_contig12571.1615.1 vs. uniprot
Match: A0A7S1BXU3_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BXU3_9STRA) HSP 1 Score: 134 bits (337), Expect = 2.450e-34 Identity = 63/111 (56.76%), Postives = 85/111 (76.58%), Query Frame = 1 Query: 1 LLQETKGALRPRPSNWKSLLMSVLVLSSKVWDDNSMWNRDFSELCPFFTLARLNELEVAVLEVLRYNVKVLSSEYAKYYFHLRSMCVRGGL-SEDHAPMHPFDMENVRVLE 330 L++ET+G +RPR SNWKS++ S ++++SKVWDD SMWN DFS+L P FTL R+N+LE+A+L L+Y VKV +SEYAKYYF LRSM R GL S+D P D+++V+ E Sbjct: 544 LVKETQGVVRPRCSNWKSIIFSSMIMASKVWDDLSMWNADFSQLSPSFTLQRINDLEIAILNALKYCVKVPASEYAKYYFLLRSMLARSGLGSDDLTSASPLDVDSVKKFE 654
BLAST of mRNA_H-paniculata_contig12571.1615.1 vs. uniprot
Match: A0A7S2CSZ7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CSZ7_9STRA) HSP 1 Score: 125 bits (315), Expect = 4.260e-34 Identity = 57/106 (53.77%), Postives = 78/106 (73.58%), Query Frame = 1 Query: 13 TKGALRPRPSNWKSLLMSVLVLSSKVWDDNSMWNRDFSELCPFFTLARLNELEVAVLEVLRYNVKVLSSEYAKYYFHLRSMCVRGGLSEDHAPMHPFDMENVRVLE 330 +KG L RP NWKSLL++ +V++SKVWDD SMWN DFS++C LAR+NELE+A+L+ +Y V V++SEYAKYYFHLRS C R GL + P D+++ + L+ Sbjct: 24 SKGYLVIRPENWKSLLLACMVMASKVWDDLSMWNADFSQVCHKVNLARINELELALLDFFKYEVTVMASEYAKYYFHLRSSCSRLGLQNVKDKLKPLDLQHAKKLQ 129
BLAST of mRNA_H-paniculata_contig12571.1615.1 vs. uniprot
Match: A0A7R9ZM94_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZM94_9STRA) HSP 1 Score: 126 bits (317), Expect = 4.300e-34 Identity = 63/114 (55.26%), Postives = 81/114 (71.05%), Query Frame = 1 Query: 1 LLQETKGALRPRPSNWKSLLMSVLVLSSKVWDDNSMWNRDFSELCP---FFTLARLNELEVAVLEVLRYNVKVLSSEYAKYYFHLRSMCVRGGLSEDH-APMHPFDMENVRVLE 330 L++ T+G LRPR SNW+S+L S +VLSSKVWDD SMWN DFS+ CP F L R+NELE+A+L VL + VKV +SEYAKYYF LRSM ++ GL D ++P D+ L+ Sbjct: 69 LIKTTRGTLRPRASNWRSMLFSCMVLSSKVWDDLSMWNADFSQSCPPGVSFPLQRINELELAILNVLEFQVKVPASEYAKYYFLLRSMLIKSGLGGDQITTLNPLDVVGALRLQ 182
BLAST of mRNA_H-paniculata_contig12571.1615.1 vs. uniprot
Match: A0A1E7FAH8_9STRA (Cyclin N-terminal domain-containing protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FAH8_9STRA) HSP 1 Score: 125 bits (313), Expect = 1.370e-33 Identity = 62/114 (54.39%), Postives = 82/114 (71.93%), Query Frame = 1 Query: 1 LLQETKGALRPRPSNWKSLLMSVLVLSSKVWDDNSMWNRDFSELCPF---FTLARLNELEVAVLEVLRYNVKVLSSEYAKYYFHLRSMCVRGGLS-EDHAPMHPFDMENVRVLE 330 L++ T G LRP+ NW+SLL S ++LSSKVWDD SMWN DFS+ CP F+L R N+LE+AVL L + VKV +SEYAKYYF LRSM ++ GL+ E+ ++P D+E R L+ Sbjct: 112 LIKVTHGCLRPKTCNWRSLLFSTMILSSKVWDDLSMWNGDFSQSCPSGVNFSLQRTNQLELAVLNTLHFKVKVPASEYAKYYFLLRSMLIKSGLAGENLGSLNPLDVEGARRLQ 225
BLAST of mRNA_H-paniculata_contig12571.1615.1 vs. uniprot
Match: A0A7S4AWA7_9STRA (Hypothetical protein n=2 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AWA7_9STRA) HSP 1 Score: 129 bits (323), Expect = 1.560e-33 Identity = 64/115 (55.65%), Postives = 85/115 (73.91%), Query Frame = 1 Query: 1 LLQETKGALRPRPSNWKSLLMSVLVLSSKVWDDNSMWNRDFSELCP----FFTLARLNELEVAVLEVLRYNVKVLSSEYAKYYFHLRSMCVRGGLS-EDHAPMHPFDMENVRVLE 330 L+++T G LRPR SNW+SL+ S ++LSSKVWDD SMWN DFS+ CP F+L R+N+LE+AVL L+++VKV +SEYAKYYF LRSM ++ GL ED + P D+E R L+ Sbjct: 228 LIKQTIGRLRPRASNWRSLIFSCMILSSKVWDDLSMWNGDFSQSCPPGGVNFSLQRINQLELAVLNSLKFSVKVPASEYAKYYFLLRSMLIKSGLGGEDLGSLDPLDVEGARRLQ 342 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig12571.1615.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig12571.1615.1 >prot_H-paniculata_contig12571.1615.1 ID=prot_H-paniculata_contig12571.1615.1|Name=mRNA_H-paniculata_contig12571.1615.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=110bp LLQETKGALRPRPSNWKSLLMSVLVLSSKVWDDNSMWNRDFSELCPFFTLback to top mRNA from alignment at H-paniculata_contig12571:178..2279+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig12571.1615.1 ID=mRNA_H-paniculata_contig12571.1615.1|Name=mRNA_H-paniculata_contig12571.1615.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2102bp|location=Sequence derived from alignment at H-paniculata_contig12571:178..2279+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig12571:178..2279+ >mRNA_H-paniculata_contig12571.1615.1 ID=mRNA_H-paniculata_contig12571.1615.1|Name=mRNA_H-paniculata_contig12571.1615.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=660bp|location=Sequence derived from alignment at H-paniculata_contig12571:178..2279+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |