prot_H-paniculata_contig12571.1615.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig12571.1615.1
Unique Name	prot_H-paniculata_contig12571.1615.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	110

Homology

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BLAST of mRNA_H-paniculata_contig12571.1615.1 vs. uniprot
Match: D8LI84_ECTSI (WW domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI84_ECTSI)

HSP 1 Score: 186 bits (471), Expect = 1.310e-53
Identity = 85/110 (77.27%), Postives = 100/110 (90.91%), Query Frame = 0

Query:    1 LLQETKGALRPRPSNWKSLLMSVLVLSSKVWDDNSMWNRDFSELCPFFTLARLNELEVAVLEVLRYNVKVLSSEYAKYYFHLRSMCVRGGLSEDHAPMHPFDMENVRVLE 110
            L++ETKGA+RP+P NWKSL++S LVLSSKVWDDNSMWNRDFSE+ P F+L RLN+LEVAVL VLR+NVKVLSSEYAKYYFHLR+MCVRGGLS+ HAP+HP DME ++ LE
Sbjct:  453 LMKETKGAIRPQPWNWKSLIISALVLSSKVWDDNSMWNRDFSEVFPSFSLGRLNQLEVAVLGVLRFNVKVLSSEYAKYYFHLRAMCVRGGLSDSHAPIHPLDMEGIKELE 562

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BLAST of mRNA_H-paniculata_contig12571.1615.1 vs. uniprot
Match: A0A7S2SV86_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SV86_9STRA)

HSP 1 Score: 140 bits (354), Expect = 1.320e-37
Identity = 62/106 (58.49%), Postives = 85/106 (80.19%), Query Frame = 0

Query:    5 TKGALRPRPSNWKSLLMSVLVLSSKVWDDNSMWNRDFSELCPFFTLARLNELEVAVLEVLRYNVKVLSSEYAKYYFHLRSMCVRGGLSEDHAPMHPFDMENVRVLE 110
            TKG+++ RP+NWKSLL+S ++++SKVWDD SMWN DFS++CP FTL R+NELE+A+L+VL Y VKV +S+YAKYYFH+RS CVR GL+ D   + P D+   + L+
Sbjct:  290 TKGSIQVRPNNWKSLLVSTMIMASKVWDDLSMWNADFSQVCPSFTLRRINELELALLDVLGYIVKVAASDYAKYYFHIRSYCVRLGLTHDLDSLAPLDLTGAKKLQ 395

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BLAST of mRNA_H-paniculata_contig12571.1615.1 vs. uniprot
Match: A0A7S2I4W4_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I4W4_9STRA)

HSP 1 Score: 139 bits (350), Expect = 1.690e-36
Identity = 66/113 (58.41%), Postives = 86/113 (76.11%), Query Frame = 0

Query:    1 LLQETKGALRPRPSNWKSLLMSVLVLSSKVWDDNSMWNRDFSELCP---FFTLARLNELEVAVLEVLRYNVKVLSSEYAKYYFHLRSMCVRGGLSEDHAPMHPFDMENVRVLE 110
            L+++T G +RP+PSNW+S+L S +V+SSKVWDD SMWN DFS+ CP    F+L R+NELE+AVL  L+YNVKV +SEYAKYYF LRSM +R GL+ +     P +ME V+ LE
Sbjct:  375 LIKDTNGGVRPKPSNWRSILFSCMVMSSKVWDDLSMWNADFSQTCPRDVSFSLQRINELELAVLGCLKYNVKVTASEYAKYYFLLRSMLIRSGLAGEDMTNTPLNMEGVKKLE 487

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BLAST of mRNA_H-paniculata_contig12571.1615.1 vs. uniprot
Match: A0A7S3DPP7_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DPP7_9STRA)

HSP 1 Score: 132 bits (331), Expect = 5.460e-36
Identity = 66/114 (57.89%), Postives = 85/114 (74.56%), Query Frame = 0

Query:    1 LLQETKGALRPRPSNWKSLLMSVLVLSSKVWDDNSMWNRDFSELCPF---FTLARLNELEVAVLEVLRYNVKVLSSEYAKYYFHLRSMCVRGGLS-EDHAPMHPFDMENVRVLE 110
            L++ T+G LRPR +NW+S+L S +VL+SKVWDD SMWN DFS+ CP    FTL R+NELE+AVL+ L Y VKV +SEYAKYYF LRSM ++ GL  ED   M+P D++  R L+
Sbjct:   95 LIKNTRGNLRPRATNWRSVLFSCMVLASKVWDDLSMWNGDFSQTCPAGVTFTLQRINELELAVLDALEYIVKVPASEYAKYYFLLRSMLIKSGLGGEDLNEMNPLDVDGARRLQ 208

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BLAST of mRNA_H-paniculata_contig12571.1615.1 vs. uniprot
Match: A0A7S2EB28_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EB28_9STRA)

HSP 1 Score: 137 bits (344), Expect = 2.740e-35
Identity = 66/113 (58.41%), Postives = 85/113 (75.22%), Query Frame = 0

Query:    1 LLQETKGALRPRPSNWKSLLMSVLVLSSKVWDDNSMWNRDFSELCP---FFTLARLNELEVAVLEVLRYNVKVLSSEYAKYYFHLRSMCVRGGLSEDHAPMHPFDMENVRVLE 110
            L+++T G +RPRPSNW+S+L S +V+SSKVWDD SMWN DFS+ CP    F+L R+NELE+AVL  LRY+VKV +SEYAKYYF LRSM +R GL+ +     P + E V+ LE
Sbjct:  543 LIKDTNGGVRPRPSNWRSILFSCMVMSSKVWDDLSMWNADFSQTCPRGVSFSLQRINELELAVLGCLRYSVKVTASEYAKYYFLLRSMLIRSGLAGEDMTNTPLNAEGVQKLE 655

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BLAST of mRNA_H-paniculata_contig12571.1615.1 vs. uniprot
Match: A0A7S1BXU3_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BXU3_9STRA)

HSP 1 Score: 134 bits (337), Expect = 2.450e-34
Identity = 63/111 (56.76%), Postives = 85/111 (76.58%), Query Frame = 0

Query:    1 LLQETKGALRPRPSNWKSLLMSVLVLSSKVWDDNSMWNRDFSELCPFFTLARLNELEVAVLEVLRYNVKVLSSEYAKYYFHLRSMCVRGGL-SEDHAPMHPFDMENVRVLE 110
            L++ET+G +RPR SNWKS++ S ++++SKVWDD SMWN DFS+L P FTL R+N+LE+A+L  L+Y VKV +SEYAKYYF LRSM  R GL S+D     P D+++V+  E
Sbjct:  544 LVKETQGVVRPRCSNWKSIIFSSMIMASKVWDDLSMWNADFSQLSPSFTLQRINDLEIAILNALKYCVKVPASEYAKYYFLLRSMLARSGLGSDDLTSASPLDVDSVKKFE 654

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BLAST of mRNA_H-paniculata_contig12571.1615.1 vs. uniprot
Match: A0A7S2CSZ7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CSZ7_9STRA)

HSP 1 Score: 125 bits (315), Expect = 4.260e-34
Identity = 57/106 (53.77%), Postives = 78/106 (73.58%), Query Frame = 0

Query:    5 TKGALRPRPSNWKSLLMSVLVLSSKVWDDNSMWNRDFSELCPFFTLARLNELEVAVLEVLRYNVKVLSSEYAKYYFHLRSMCVRGGLSEDHAPMHPFDMENVRVLE 110
            +KG L  RP NWKSLL++ +V++SKVWDD SMWN DFS++C    LAR+NELE+A+L+  +Y V V++SEYAKYYFHLRS C R GL      + P D+++ + L+
Sbjct:   24 SKGYLVIRPENWKSLLLACMVMASKVWDDLSMWNADFSQVCHKVNLARINELELALLDFFKYEVTVMASEYAKYYFHLRSSCSRLGLQNVKDKLKPLDLQHAKKLQ 129

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BLAST of mRNA_H-paniculata_contig12571.1615.1 vs. uniprot
Match: A0A7R9ZM94_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZM94_9STRA)

HSP 1 Score: 126 bits (317), Expect = 4.300e-34
Identity = 63/114 (55.26%), Postives = 81/114 (71.05%), Query Frame = 0

Query:    1 LLQETKGALRPRPSNWKSLLMSVLVLSSKVWDDNSMWNRDFSELCP---FFTLARLNELEVAVLEVLRYNVKVLSSEYAKYYFHLRSMCVRGGLSEDH-APMHPFDMENVRVLE 110
            L++ T+G LRPR SNW+S+L S +VLSSKVWDD SMWN DFS+ CP    F L R+NELE+A+L VL + VKV +SEYAKYYF LRSM ++ GL  D    ++P D+     L+
Sbjct:   69 LIKTTRGTLRPRASNWRSMLFSCMVLSSKVWDDLSMWNADFSQSCPPGVSFPLQRINELELAILNVLEFQVKVPASEYAKYYFLLRSMLIKSGLGGDQITTLNPLDVVGALRLQ 182

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BLAST of mRNA_H-paniculata_contig12571.1615.1 vs. uniprot
Match: A0A1E7FAH8_9STRA (Cyclin N-terminal domain-containing protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FAH8_9STRA)

HSP 1 Score: 125 bits (313), Expect = 1.370e-33
Identity = 62/114 (54.39%), Postives = 82/114 (71.93%), Query Frame = 0

Query:    1 LLQETKGALRPRPSNWKSLLMSVLVLSSKVWDDNSMWNRDFSELCPF---FTLARLNELEVAVLEVLRYNVKVLSSEYAKYYFHLRSMCVRGGLS-EDHAPMHPFDMENVRVLE 110
            L++ T G LRP+  NW+SLL S ++LSSKVWDD SMWN DFS+ CP    F+L R N+LE+AVL  L + VKV +SEYAKYYF LRSM ++ GL+ E+   ++P D+E  R L+
Sbjct:  112 LIKVTHGCLRPKTCNWRSLLFSTMILSSKVWDDLSMWNGDFSQSCPSGVNFSLQRTNQLELAVLNTLHFKVKVPASEYAKYYFLLRSMLIKSGLAGENLGSLNPLDVEGARRLQ 225

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BLAST of mRNA_H-paniculata_contig12571.1615.1 vs. uniprot
Match: A0A7S4AWA7_9STRA (Hypothetical protein n=2 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AWA7_9STRA)

HSP 1 Score: 129 bits (323), Expect = 1.560e-33
Identity = 64/115 (55.65%), Postives = 85/115 (73.91%), Query Frame = 0

Query:    1 LLQETKGALRPRPSNWKSLLMSVLVLSSKVWDDNSMWNRDFSELCP----FFTLARLNELEVAVLEVLRYNVKVLSSEYAKYYFHLRSMCVRGGLS-EDHAPMHPFDMENVRVLE 110
            L+++T G LRPR SNW+SL+ S ++LSSKVWDD SMWN DFS+ CP     F+L R+N+LE+AVL  L+++VKV +SEYAKYYF LRSM ++ GL  ED   + P D+E  R L+
Sbjct:  228 LIKQTIGRLRPRASNWRSLIFSCMILSSKVWDDLSMWNGDFSQSCPPGGVNFSLQRINQLELAVLNSLKFSVKVPASEYAKYYFLLRSMLIKSGLGGEDLGSLDPLDVEGARRLQ 342

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig12571.1615.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig12571.1615.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LI84_ECTSI	1.310e-53	77.27	WW domain-containing protein n=2 Tax=Ectocarpus Ta...	[more]
A0A7S2SV86_9STRA	1.320e-37	58.49	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]
A0A7S2I4W4_9STRA	1.690e-36	58.41	Hypothetical protein n=1 Tax=Helicotheca tamesis T...	[more]
A0A7S3DPP7_9STRA	5.460e-36	57.89	Hypothetical protein n=1 Tax=Amphiprora paludosa T...	[more]
A0A7S2EB28_9STRA	2.740e-35	58.41	Hypothetical protein n=1 Tax=Ditylum brightwellii ...	[more]
A0A7S1BXU3_9STRA	2.450e-34	56.76	Hypothetical protein n=1 Tax=Corethron hystrix Tax...	[more]
A0A7S2CSZ7_9STRA	4.260e-34	53.77	Hypothetical protein n=1 Tax=Dictyocha speculum Ta...	[more]
A0A7R9ZM94_9STRA	4.300e-34	55.26	Hypothetical protein n=1 Tax=Craspedostauros austr...	[more]
A0A1E7FAH8_9STRA	1.370e-33	54.39	Cyclin N-terminal domain-containing protein (Fragm...	[more]
A0A7S4AWA7_9STRA	1.560e-33	55.65	Hypothetical protein n=2 Tax=Pseudo-nitzschia aust...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR14248	FAMILY NOT NAMED	coord: 5..92
IPR036915	Cyclin-like superfamily	SUPERFAMILY	47954	Cyclin-like	coord: 13..68

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig12571	contig	H-paniculata_contig12571:178..2279 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig12571.1615.1	mRNA_H-paniculata_contig12571.1615.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig12571 178..2279 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig12571.1615.1 ID=prot_H-paniculata_contig12571.1615.1|Name=mRNA_H-paniculata_contig12571.1615.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=110bp
LLQETKGALRPRPSNWKSLLMSVLVLSSKVWDDNSMWNRDFSELCPFFTL
ARLNELEVAVLEVLRYNVKVLSSEYAKYYFHLRSMCVRGGLSEDHAPMHP
FDMENVRVLE

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036915	Cyclin-like_sf