prot_H-paniculata_contig810.16121.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig810.16121.1
Unique Nameprot_H-paniculata_contig810.16121.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length238
Homology
BLAST of mRNA_H-paniculata_contig810.16121.1 vs. uniprot
Match: A0A4Y1QWW3_PRUDU (Transposable element protein n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1QWW3_PRUDU)

HSP 1 Score: 214 bits (546), Expect = 7.850e-61
Identity = 106/231 (45.89%), Postives = 145/231 (62.77%), Query Frame = 0
Query:    9 RTAEPLELVHTDIAGPM-DKSFRGSRFAIIFVDDYSRMRKIYTLRQKSEALWALKQFEKHAVSARGLRIKNLGSDQGGEYTGKPFRLFCAANGIKQEFSATYTPQQTGVVESSWRSIFEMASTKMITAKMGRRYWAEVARSAVYCLNRAPTRPHNGGTPYEKWHGEEPQLDHVRVFGCTAYVTFQLQQRRKLDDKARAGVFLGYDNDSPSYRINDPRTSNLQLSRNVRFDE 238
            R   PLELVH DI GP    SF   R+ I+FVDD+SRM  +Y L QKSEA    KQF+    +  G  +K L +D+GGE+T   F  +C +NGIK+E +A YTPQQ GV E   R+I EMA + +    +   +WAE   +AV+ LNR+PT+     TP+E WH  +P++D  ++FGCTAY     Q+R K D+K    +F+GY + S +YR+ DPRT +L +SR+V FDE
Sbjct:  178 RAKAPLELVHADICGPTRTPSFNNKRYFILFVDDFSRMMWVYFLEQKSEAFSVFKQFKAFGENQSGHNLKVLRTDRGGEFTSNEFSEYCKSNGIKRELTARYTPQQNGVAERRNRTIVEMARSMLKAKSLPNTFWAEAIHTAVFILNRSPTKAVKDKTPFEAWHRFKPKVDFFKIFGCTAYAHIPSQKREKFDEKGEKYIFVGYSDQSKAYRLIDPRTKSLVISRDVIFDE 408          
BLAST of mRNA_H-paniculata_contig810.16121.1 vs. uniprot
Match: A0A4Y1R9H3_PRUDU (Transposable element protein (Fragment) n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1R9H3_PRUDU)

HSP 1 Score: 214 bits (546), Expect = 2.690e-60
Identity = 106/231 (45.89%), Postives = 145/231 (62.77%), Query Frame = 0
Query:    9 RTAEPLELVHTDIAGPM-DKSFRGSRFAIIFVDDYSRMRKIYTLRQKSEALWALKQFEKHAVSARGLRIKNLGSDQGGEYTGKPFRLFCAANGIKQEFSATYTPQQTGVVESSWRSIFEMASTKMITAKMGRRYWAEVARSAVYCLNRAPTRPHNGGTPYEKWHGEEPQLDHVRVFGCTAYVTFQLQQRRKLDDKARAGVFLGYDNDSPSYRINDPRTSNLQLSRNVRFDE 238
            R   PLELVH DI GP    SF   R+ I+FVDD+SRM  +Y L QKSEA    KQF+    +  G  +K L +D+GGE+T   F  +C +NGIK+E +A YTPQQ GV E   R+I EMA + +    +   +WAE   +AV+ LNR+PT+     TP+E WH  +P++D  ++FGCTAY     Q+R K D+K    +F+GY + S +YR+ DPRT +L +SR+V FDE
Sbjct:  415 RAKAPLELVHADICGPTRTPSFNNKRYFILFVDDFSRMMWVYFLEQKSEAFSVFKQFKAFGENQSGHNLKVLRTDRGGEFTSNEFSEYCKSNGIKRELTARYTPQQNGVAERRNRTIVEMARSMLKAKSLPNTFWAEAIHTAVFILNRSPTKAVKDKTPFEAWHRFKPKVDFFKIFGCTAYAHIPSQKREKFDEKGEKYIFVGYSDQSKAYRLIDPRTKSLVISRDVIFDE 645          
BLAST of mRNA_H-paniculata_contig810.16121.1 vs. uniprot
Match: A0A8J5GP83_ZINOF (Integrase catalytic domain-containing protein n=1 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5GP83_ZINOF)

HSP 1 Score: 212 bits (540), Expect = 5.200e-60
Identity = 105/227 (46.26%), Postives = 141/227 (62.11%), Query Frame = 0
Query:   13 PLELVHTDIAGPMDKSFRG-SRFAIIFVDDYSRMRKIYTLRQKSEALWALKQFEKHAVSARGLRIKNLGSDQGGEYTGKPFRLFCAANGIKQEFSATYTPQQTGVVESSWRSIFEMASTKMITAKMGRRYWAEVARSAVYCLNRAPTRPHNGGTPYEKWHGEEPQLDHVRVFGCTAYVTFQLQQRRKLDDKARAGVFLGYDNDSPSYRINDPRTSNLQLSRNVRFDE 238
            PLELVH+DI GPM     G  R+ I+F+DDY+RM  IY L QKSEA     QF+  A    G  IK+L +D+GGEY   PF  +C ANGIK++ + +YTPQQ GV E   R+I EMA   +    +   YWAE   +A Y +NR+PT+  +  TPYE WH ++P +DH ++FG  AY     Q+R K D K +  +F+GY N+S  YR+ DP T  + +SR+V FDE
Sbjct:  507 PLELVHSDICGPMQTPTPGRKRYFILFIDDYTRMMWIYFLNQKSEAFSTFMQFKAQAERESGFLIKSLRTDRGGEYLSNPFSEYCKANGIKRQLTTSYTPQQNGVAERKNRTIVEMARNMLKYKGIPNLYWAEAVHTAAYIMNRSPTKAVHNMTPYEAWHKKKPVVDHFKIFGSLAYALLPSQRREKFDSKGQKLIFIGYSNESKGYRLLDPSTLKIIVSRDVIFDE 733          
BLAST of mRNA_H-paniculata_contig810.16121.1 vs. uniprot
Match: A0A8J5F3N7_ZINOF (Integrase catalytic domain-containing protein n=1 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5F3N7_ZINOF)

HSP 1 Score: 213 bits (541), Expect = 1.340e-59
Identity = 105/227 (46.26%), Postives = 142/227 (62.56%), Query Frame = 0
Query:   13 PLELVHTDIAGPMDKSFRG-SRFAIIFVDDYSRMRKIYTLRQKSEALWALKQFEKHAVSARGLRIKNLGSDQGGEYTGKPFRLFCAANGIKQEFSATYTPQQTGVVESSWRSIFEMASTKMITAKMGRRYWAEVARSAVYCLNRAPTRPHNGGTPYEKWHGEEPQLDHVRVFGCTAYVTFQLQQRRKLDDKARAGVFLGYDNDSPSYRINDPRTSNLQLSRNVRFDE 238
            PLELVH+DI GPM     G  R+ I+F+DDY+RM  IY L QKSEA     QF+  A    G  IK+L +D+GGEY   PF  +C ANGIK++ + +YTPQQ GV E   R+I EMA + +    +   YWAE   +A Y +NR+PT+  +  TPYE WH ++P +DH ++FG  AY     Q+R K D K +  +F+GY N+S  YR+ DP T  + +SR+V FDE
Sbjct:  477 PLELVHSDICGPMQTPTPGRKRYFILFIDDYTRMMWIYFLNQKSEAFSTFMQFKAQAERESGFLIKSLRTDRGGEYLSNPFSEYCKANGIKRQLTTSYTPQQNGVAERKNRTIVEMARSMLKYKGIPNLYWAEAVHTAAYIMNRSPTKAVHNMTPYEAWHKKKPVVDHFKIFGSLAYALLPSQRREKFDSKGQKLIFIGYSNESKGYRLLDPSTFKIIVSRDVIFDE 703          
BLAST of mRNA_H-paniculata_contig810.16121.1 vs. uniprot
Match: A0A6A2WXP0_HIBSY (Phospholipase D n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2WXP0_HIBSY)

HSP 1 Score: 210 bits (534), Expect = 1.220e-58
Identity = 105/231 (45.45%), Postives = 146/231 (63.20%), Query Frame = 0
Query:    9 RTAEPLELVHTDIAGPMD-KSFRGSRFAIIFVDDYSRMRKIYTLRQKSEALWALKQFEKHAVSARGLRIKNLGSDQGGEYTGKPFRLFCAANGIKQEFSATYTPQQTGVVESSWRSIFEMASTKMITAKMGRRYWAEVARSAVYCLNRAPTRPHNGGTPYEKWHGEEPQLDHVRVFGCTAYVTFQLQQRRKLDDKARAGVFLGYDNDSPSYRINDPRTSNLQLSRNVRFDE 238
            R   PLE+VHTDIAGP D  S  G+R+ + F+DD+SR   IY L++KSEAL  L++F+  +    G  +K L SD+GGEYT K F  FC  +GI  + +  YTPQQ GV E   R+I +MA + +   ++ R +WAE  R AVY LNR PT+     TP E W G++P + H+++FGC AY     Q R+KLDD+    +F+GYD  S +YR+ +P T  + +SR+V FDE
Sbjct: 1306 RARRPLEIVHTDIAGPFDIPSLGGNRYYLTFIDDFSRKCWIYILKEKSEALEKLREFKAMSEKQSGQYLKILRSDRGGEYTSKLFEEFCKEHGIIHQLTGRYTPQQNGVAERKNRTILDMARSMIKGKQLPRNFWAEAVRCAVYLLNRCPTKSVKYMTPNEAWSGQKPGVGHLKIFGCIAYAHVPEQTRKKLDDRGEKCIFIGYDERSKAYRLYNPLTKKIIISRDVEFDE 1536          
BLAST of mRNA_H-paniculata_contig810.16121.1 vs. uniprot
Match: UPI001F004464 (DDE-type integrase/transposase/recombinase n=1 Tax=Corynebacterium parakroppenstedtii TaxID=2828363 RepID=UPI001F004464)

HSP 1 Score: 209 bits (531), Expect = 1.700e-58
Identity = 102/231 (44.16%), Postives = 149/231 (64.50%), Query Frame = 0
Query:    9 RTAEPLELVHTDIAGPMDKSFRG-SRFAIIFVDDYSRMRKIYTLRQKSEALWALKQFEKHAVSARGLRIKNLGSDQGGEYTGKPFRLFCAANGIKQEFSATYTPQQTGVVESSWRSIFEMASTKMITAKMGRRYWAEVARSAVYCLNRAPTRPHNGGTPYEKWHGEEPQLDHVRVFGCTAYVTFQLQQRRKLDDKARAGVFLGYDNDSPSYRINDPRTSNLQLSRNVRFDE 238
            R  +PLEL+HTDI GP+  S  G S + ++F+DD+SR   +Y L+QKSEA    K+F+       GL IK + SD+GGE+T + F+ FC  +GI++  +   +PQQ GV E   R+I +MA + + +  + + +WAE    AVY LNR+PTR   G TP E W G +P + H+RVFG  AY     + R KLDDK++A +F+GYD++S  Y++ +P T+NL +SR+V FDE
Sbjct:  170 RAQKPLELIHTDICGPIKPSSLGKSNYFLLFIDDFSRKTWVYFLKQKSEAFEVFKKFKAAVEKESGLHIKAMRSDRGGEFTSREFQNFCEKHGIRRPLTVPRSPQQNGVAERKNRTILDMARSMLKSKNLPKEFWAEAVACAVYLLNRSPTRSVWGKTPQESWSGRKPGISHLRVFGSKAYAHVPDETRSKLDDKSKAFIFIGYDSNSKGYKLYNPDTNNLVISRDVEFDE 400          
BLAST of mRNA_H-paniculata_contig810.16121.1 vs. uniprot
Match: A0A6A2WSU7_HIBSY (Integrase catalytic domain-containing protein n=2 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2WSU7_HIBSY)

HSP 1 Score: 207 bits (527), Expect = 9.700e-58
Identity = 106/231 (45.89%), Postives = 144/231 (62.34%), Query Frame = 0
Query:    9 RTAEPLELVHTDIAGPMD-KSFRGSRFAIIFVDDYSRMRKIYTLRQKSEALWALKQFEKHAVSARGLRIKNLGSDQGGEYTGKPFRLFCAANGIKQEFSATYTPQQTGVVESSWRSIFEMASTKMITAKMGRRYWAEVARSAVYCLNRAPTRPHNGGTPYEKWHGEEPQLDHVRVFGCTAYVTFQLQQRRKLDDKARAGVFLGYDNDSPSYRINDPRTSNLQLSRNVRFDE 238
            R    LE+VHTDIAGP D  S  G+R+ + F+DD+SR   IY L++KSEAL  LK+F+  A    G  +K L SD+GGEYT K F  FC  +GI  + +A YTPQQ GV E   R+I +MA + +   ++ R +WAE  R AVY LNR PT+     TP E W G++P + H ++FGC AY       R+KLDD+    +F+GYD  S +YR+ +P T  + +SR+V FDE
Sbjct:  385 RAQRLLEIVHTDIAGPFDIPSLGGNRYYLTFIDDFSRKCWIYILKEKSEALEKLKEFKAMAEKQSGQYLKILRSDRGGEYTSKLFEEFCKEHGIIHQLTARYTPQQNGVAERKNRTILDMARSMIKGKQLPRNFWAEAVRCAVYLLNRCPTKSVKYMTPNEAWSGQKPGVGHFKIFGCIAYAHVPEHTRKKLDDRGEKCIFIGYDERSKAYRLYNPLTKKIIISRDVEFDE 615          
BLAST of mRNA_H-paniculata_contig810.16121.1 vs. uniprot
Match: UPI000A29CC5E (uncharacterized protein LOC110224828 n=1 Tax=Arabidopsis lyrata subsp. lyrata TaxID=81972 RepID=UPI000A29CC5E)

HSP 1 Score: 205 bits (522), Expect = 2.530e-57
Identity = 99/231 (42.86%), Postives = 147/231 (63.64%), Query Frame = 0
Query:    9 RTAEPLELVHTDIAGPMD-KSFRGSRFAIIFVDDYSRMRKIYTLRQKSEALWALKQFEKHAVSARGLRIKNLGSDQGGEYTGKPFRLFCAANGIKQEFSATYTPQQTGVVESSWRSIFEMASTKMITAKMGRRYWAEVARSAVYCLNRAPTRPHNGGTPYEKWHGEEPQLDHVRVFGCTAYVTFQLQQRRKLDDKARAGVFLGYDNDSPSYRINDPRTSNLQLSRNVRFDE 238
            R  +PLEL+HTD+ GP+  KS   S + ++F+DD+SR   +Y L++KSE     K+F+ H     GL IK++ SD+GGE+T K F  +C  NGI+++ +   +PQQ GV E   R+I EMA + + + ++ +  WAE    AVY LNR+PT+  +G TP E W G +P + H+RVFG  A+     ++R KLDDK+   +F+GYDN+S  Y++ +P T    +SRNV FDE
Sbjct:  521 RAQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFENFKRFKAHVEKESGLTIKSMRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKELWAEAVAYAVYLLNRSPTKSISGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNVVFDE 751          
BLAST of mRNA_H-paniculata_contig810.16121.1 vs. uniprot
Match: A0A151T355_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Cajanus cajan TaxID=3821 RepID=A0A151T355_CAJCA)

HSP 1 Score: 205 bits (522), Expect = 4.650e-57
Identity = 97/231 (41.99%), Postives = 141/231 (61.04%), Query Frame = 0
Query:    9 RTAEPLELVHTDIAGPMDK-SFRGSRFAIIFVDDYSRMRKIYTLRQKSEALWALKQFEKHAVSARGLRIKNLGSDQGGEYTGKPFRLFCAANGIKQEFSATYTPQQTGVVESSWRSIFEMASTKMITAKMGRRYWAEVARSAVYCLNRAPTRPHNGGTPYEKWHGEEPQLDHVRVFGCTAYVTFQLQQRRKLDDKARAGVFLGYDNDSPSYRINDPRTSNLQLSRNVRFDE 238
            R  E L+LVHTD+ GPM   S  GS++ ++F+DDY+RM  ++ L++KS+      +F+    +  GL++K L SD G EYT   F+ FC   GI+ + +  YTPQQ GV E   R++ EMA   +    + + +WAE   ++VY LN  PT+   G TP+E WHG  P ++H++VFGC  Y      +R KLD K+  G+FLGY + S  YRI +P T  + +SRNV+FDE
Sbjct:  450 RATEKLQLVHTDVCGPMSTTSLNGSKYFLLFIDDYTRMSWVFFLKKKSDVFANFLKFKFMVENETGLQVKRLRSDNGTEYTAGEFKKFCEQVGIQHQLTVPYTPQQNGVSERKNRTVMEMARCLLFEKGLPKTFWAEAVNTSVYLLNLLPTKALKGNTPFEAWHGRTPSVEHLKVFGCVCYALVPEVKRDKLDQKSEVGIFLGYSSYSKGYRIYNPATKKILVSRNVKFDE 680          
BLAST of mRNA_H-paniculata_contig810.16121.1 vs. uniprot
Match: A0A068B703_GOSBA (Polyprotein n=5 Tax=Gossypium TaxID=3633 RepID=A0A068B703_GOSBA)

HSP 1 Score: 204 bits (520), Expect = 8.860e-57
Identity = 103/231 (44.59%), Postives = 143/231 (61.90%), Query Frame = 0
Query:    9 RTAEPLELVHTDIAGPMD-KSFRGSRFAIIFVDDYSRMRKIYTLRQKSEALWALKQFEKHAVSARGLRIKNLGSDQGGEYTGKPFRLFCAANGIKQEFSATYTPQQTGVVESSWRSIFEMASTKMITAKMGRRYWAEVARSAVYCLNRAPTRPHNGGTPYEKWHGEEPQLDHVRVFGCTAYVTFQLQQRRKLDDKARAGVFLGYDNDSPSYRINDPRTSNLQLSRNVRFDE 238
            R   PLE+VHTDI+GP D +S  G+R+ + F+DDYSR   +Y L+ KSEAL   K+F+       G  +K L SD+GGEYT K +  FC  +GI  + +A  TPQQ GV E   R+I +MA + +    + R +WAE    AVY LN+ PT+     TP E W G +P++ H+++FGC AY     QQR+KLDD+    +F+GYD  S +YR+ +P T  L +SR+V FDE
Sbjct:  539 RARRPLEIVHTDISGPYDIESLGGNRYYLTFIDDYSRKCWVYFLKAKSEALEKFKEFKAMVEKQSGRYLKILRSDRGGEYTAKLYESFCKDHGIIHQLTARRTPQQNGVAERKNRTILDMARSMIKGKHLPRTFWAEAVECAVYLLNQCPTKSVRHKTPEEAWSGHKPRVGHLKIFGCIAYAHVPEQQRKKLDDRGEKCIFIGYDKRSKAYRLYNPLTKKLIISRDVEFDE 769          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig810.16121.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A4Y1QWW3_PRUDU7.850e-6145.89Transposable element protein n=1 Tax=Prunus dulcis... [more]
A0A4Y1R9H3_PRUDU2.690e-6045.89Transposable element protein (Fragment) n=1 Tax=Pr... [more]
A0A8J5GP83_ZINOF5.200e-6046.26Integrase catalytic domain-containing protein n=1 ... [more]
A0A8J5F3N7_ZINOF1.340e-5946.26Integrase catalytic domain-containing protein n=1 ... [more]
A0A6A2WXP0_HIBSY1.220e-5845.45Phospholipase D n=1 Tax=Hibiscus syriacus TaxID=10... [more]
UPI001F0044641.700e-5844.16DDE-type integrase/transposase/recombinase n=1 Tax... [more]
A0A6A2WSU7_HIBSY9.700e-5845.89Integrase catalytic domain-containing protein n=2 ... [more]
UPI000A29CC5E2.530e-5742.86uncharacterized protein LOC110224828 n=1 Tax=Arabi... [more]
A0A151T355_CAJCA4.650e-5741.99Retrovirus-related Pol polyprotein from transposon... [more]
A0A068B703_GOSBA8.860e-5744.59Polyprotein n=5 Tax=Gossypium TaxID=3633 RepID=A0A... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001584Integrase, catalytic corePFAMPF00665rvecoord: 11..124
e-value: 4.3E-20
score: 72.1
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 9..174
score: 21.823
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 5..203
e-value: 5.5E-32
score: 112.6
NoneNo IPR availablePANTHERPTHR11439:SF250coord: 9..237
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 9..237
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 10..170

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig810contigH-paniculata_contig810:26121..26834 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig810.16121.1mRNA_H-paniculata_contig810.16121.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig810 26121..26834 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig810.16121.1 ID=prot_H-paniculata_contig810.16121.1|Name=mRNA_H-paniculata_contig810.16121.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=238bp
PVKNYGEERTAEPLELVHTDIAGPMDKSFRGSRFAIIFVDDYSRMRKIYT
LRQKSEALWALKQFEKHAVSARGLRIKNLGSDQGGEYTGKPFRLFCAANG
IKQEFSATYTPQQTGVVESSWRSIFEMASTKMITAKMGRRYWAEVARSAV
YCLNRAPTRPHNGGTPYEKWHGEEPQLDHVRVFGCTAYVTFQLQQRRKLD
DKARAGVFLGYDNDSPSYRINDPRTSNLQLSRNVRFDE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001584Integrase_cat-core
IPR036397RNaseH_sf
IPR039537Retrotran_Ty1/copia-like
IPR012337RNaseH-like_sf