prot_H-paniculata_contig8040.16057.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig8040.16057.1
Unique Nameprot_H-paniculata_contig8040.16057.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length119
Homology
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BLAST of mRNA_H-paniculata_contig8040.16057.1 vs. uniprot
Match: A0A7S2STH1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2STH1_9STRA)

HSP 1 Score: 51.6 bits (122), Expect = 3.630e-5
Identity = 33/110 (30.00%), Postives = 58/110 (52.73%), Query Frame = 0 
Query:    3 MEKPFNGMFDKAREIAGVDDAGKAMHVGISYEEDIAGACEQGWEAACIKPKQSDWESKDEM---YEYHRLMQFEDLLNGFGLPKLQKTT-MRRRRGQWW----GDPEEDA 104
            +EKP + +FD A    G+ D  +A+H+G ++++D+AGA   GW A  ++      ++ D++    E+ R+     +L+ F L   ++   M   RG +     GD EEDA
Sbjct:  273 VEKPNSPIFDMALSRLGIYDRSRAVHIGDTFDKDVAGAARAGWNAIFVRAPPYRMKNVDDLPCDIEFQRVGDLSHVLDIFNLADFERPVIMTSARGIFEYDAEGDAEEDA 382
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8040.16057.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7S2STH1_9STRA3.630e-530.00Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023214HAD superfamilyGENE3D3.40.50.1000coord: 2..62
e-value: 7.5E-9
score: 37.6
IPR036412HAD-like superfamilySUPERFAMILY56784HAD-likecoord: 2..55

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8040contigH-paniculata_contig8040:5126..6915 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8040.16057.1mRNA_H-paniculata_contig8040.16057.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig8040 3311..10284 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig8040.16057.1 ID=prot_H-paniculata_contig8040.16057.1|Name=mRNA_H-paniculata_contig8040.16057.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=119bp
MGMEKPFNGMFDKAREIAGVDDAGKAMHVGISYEEDIAGACEQGWEAACI
KPKQSDWESKDEMYEYHRLMQFEDLLNGFGLPKLQKTTMRRRRGQWWGDP
EEDAMGWCGEETLGCNQL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023214HAD_sf
IPR036412HAD-like_sf