Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 815 |
| Cds size | 741 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig12551.1605.1 >prot_H-paniculata_contig12551.1605.1 ID=prot_H-paniculata_contig12551.1605.1|Name=mRNA_H-paniculata_contig12551.1605.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=247bp
MGRDLEEIYQVYMLNREEVIETGAALKRSLERTSGLHGDRFRLIVKLARA
FKYISQLEESPTATTRVKEVEAEVVDLKRHIVDLQVVTRVINEESMLEAR
CKQIHDQLGETDKGMINLQREIESFKRSIDKKEHLQGTKAEQKEHIYMRN
HSGRSYASFSCEGLWWSRMQLSNGEATLKRMSASREKLAAEYEETVEVFQ
SVKQRRARYEEIEVARKKNVEETTDGPEPEPGGSSKSGMNDTDTTY* back to topmRNA from alignment at H-paniculata_contig12551:3478..5388+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig12551.1605.1 ID=mRNA_H-paniculata_contig12551.1605.1|Name=mRNA_H-paniculata_contig12551.1605.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1911bp|location=Sequence derived from alignment at H-paniculata_contig12551:3478..5388+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ACGAAATGGGAAGGGATCTAGAAGAGATATATCAGGTGTACATGCTAAAC
CGGGAAGAGGTCATTGAGACGGGTGCTGCTCTGAAACGGAGCCTGGAGCG
CACAAGTGGTCTTCACGGAGATCGATTTCGGTGTGACACAGAACAATAGA
CAAGTTGGATTTTGGCCTTCAGCCTATATGTAATGTCGTATTGTTCCATT
TGTCATCTAATTCGCCCTCTCGTTCATACATATAACGTGTTTTTACTTTC
ATATTTTCACATAAACATGTTATATTTGCCAAACGTTCATATCCACTTTC
AATAAAAAAAATCCGCCCTTGGATATTGATAAAACGTAAAAATAAACTTG
GATAATGACAAAAATGCGGCTATTTTGCGGGAACAGAGAGCAGATCAATG
GGTCTCCCTCATAGAGCAATAATGAACGAAACATTTTTTTTAAGACAGTC
AATTGAAGTGATATCGCGATAAAATAAAGAGAGAAGATGTGGACATGTGC
AATACTGTGAGTTTTTGGTTCGTGACTTCGGTCGCCCATCAACCGCACCA
AATACATGTATCCACCAGCATGGGGAACAAAACGTTCTCCATAGTCCGCG
AGCAAGAAAAAGCGACCAAATAAAGCTATATTCAGAGAGAAACCGCCACA
TAGTCATCCAGTCACACGAAAAAAGTGCTCGTAAAGCTCCAATCCCGCAG
AGTTGGCCTTGTGTGGTGCACAATTGCCTTTAAAATGCTATAGGAGATAT
ATCATATACGCTCGTTCATACGGAAATACAAGATTGCGGTCGTACAATCC
AGACAATAAGTACCTTGCGGGGCGAAGGTCTATGTGGATTGCACTTTACT
GGCTAGATATCAAACAGGCCTTTCGGGTTTGAGGAGTCAGTGGCAGCAGT
CAATATCGCTGTTTATACGCACGGCAGGGCATCGACCAGGGTATCGATGA
TGCGATGCAGTACGTGTAAGGTTTGCTGTGAGATTCCATTGCGGACTCTG
ATGGCCAGGTGATCTAGATTCGGGCTGAGAAAAAGGAAGTTTCGGCATCA
CTGGCCTGCGAAGGGAATGGGTGATGTTTTTTCGCCTCTGCTTGTCTATA
TGTCTGTATCATACACAATCTGTCAAACATCCTAGTACATTTGTTTATTG
CCCAATCTCCTTAGCACCTGCTCACTTATCCACCCACCTACATACCCACG
AATCCGACGTTTGACCACACCCTCAGCCTAATCGTCAAATTGGCACGGGC
CTTCAAATACATCAGCCAACTTGAGGAGAGCCCGACGGCCACTACGAGGG
TGAAGGAGGTGGAGGCAGAGGTCGTCGACCTCAAGCGCCACATAGTTGAT
CTGCAGGTCGTGACTAGGGTAATCAATGAAGAGTCGATGCTGGAGGCGAG
ATGCAAGCAGATCCACGACCAATTAGGGGAGACCGATAAAGGGATGATCA
ACTTGCAGCGAGAAATCGAGAGCTTCAAGAGAAGCATAGACAAGAAGGAA
CATCTCCAGGGTACCAAGGCGGAGCAGAAGGAACACATCTACATGAGGAA
CCACTCCGGCAGATCATACGCGTCATTTTCTTGCGAGGGTCTATGGTGGA
GTCGAATGCAGCTGTCCAACGGCGAAGCGACTTTGAAGAGGATGAGTGCG
TCACGTGAGAAACTCGCCGCAGAGTACGAGGAAACAGTGGAAGTCTTCCA
GTCCGTGAAGCAGAGGAGGGCGCGGTACGAGGAGATCGAGGTGGCGCGGA
AGAAAAATGTCGAGGAGACTACAGATGGCCCCGAGCCGGAACCGGGAGGG
TCTAGCAAGAGCGGGATGAATGATACAGACACCACATATTAGTGTGGCCA
TGTACTTAACACAGCAGACAGTGCCCAGAACAAGCAAGAGAGAGAGCGAG
AAAGGAAGACA back to topCoding sequence (CDS) from alignment at H-paniculata_contig12551:3478..5388+ >mRNA_H-paniculata_contig12551.1605.1 ID=mRNA_H-paniculata_contig12551.1605.1|Name=mRNA_H-paniculata_contig12551.1605.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1482bp|location=Sequence derived from alignment at H-paniculata_contig12551:3478..5388+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGGAAGGGATCTAGAAGAGATATATCAGGTGTACATGCTAAACCGGGA
AGAGGTCATTGAGACGGGTGCTGCTCTGAAACGGAGCCTGGAGCGCACAA
GTGGTCTTCACGGAGATCGATTTCGATGGGAAGGGATCTAGAAGAGATAT
ATCAGGTGTACATGCTAAACCGGGAAGAGGTCATTGAGACGGGTGCTGCT
CTGAAACGGAGCCTGGAGCGCACAAGTGGTCTTCACGGAGATCGATTTCG
CCTAATCGTCAAATTGGCACGGGCCTTCAAATACATCAGCCAACTTGAGG
AGAGCCCGACGGCCACTACGAGGGTGAAGGAGGTGGAGGCAGAGGTCGTC
GACCTCAAGCGCCACATAGTTGATCTGCAGGTCGTGACTAGGGTAATCAA
TGAAGAGTCGATGCTGGAGGCGAGATGCAAGCAGATCCACGACCAATTAG
GGGAGACCGATAAAGGGATGATCAACTTGCAGCGAGAAATCGAGAGCTTC
AAGAGAAGCATAGACAAGAAGGAACATCTCCAGGGTACCAAGGCGGAGCA
GAAGGAACACATCTACATGAGGAACCACTCCGGCAGATCATACGCGTCAT
TTTCTTGCGAGGGTCTATGGTGGAGTCGAATGCAGCTGTCCAACGGCGAA
GCGACTTTGAAGAGGATGAGTGCGTCACGTGAGAAACTCGCCGCAGAGTA
CGAGGAAACAGTGGAAGTCTTCCAGTCCGTGAAGCAGAGGAGGGCGCGGT
ACGAGGAGATCGAGGTGGCGCGGAAGAAAAATGTCGAGGAGACTACAGAT
GGCCCCGAGCCGGAACCGGGAGGGTCTAGCAAGAGCGGGATGAATGATAC
AGACACCACATATTAGCCTAATCGTCAAATTGGCACGGGCCTTCAAATAC
ATCAGCCAACTTGAGGAGAGCCCGACGGCCACTACGAGGGTGAAGGAGGT
GGAGGCAGAGGTCGTCGACCTCAAGCGCCACATAGTTGATCTGCAGGTCG
TGACTAGGGTAATCAATGAAGAGTCGATGCTGGAGGCGAGATGCAAGCAG
ATCCACGACCAATTAGGGGAGACCGATAAAGGGATGATCAACTTGCAGCG
AGAAATCGAGAGCTTCAAGAGAAGCATAGACAAGAAGGAACATCTCCAGG
GTACCAAGGCGGAGCAGAAGGAACACATCTACATGAGGAACCACTCCGGC
AGATCATACGCGTCATTTTCTTGCGAGGGTCTATGGTGGAGTCGAATGCA
GCTGTCCAACGGCGAAGCGACTTTGAAGAGGATGAGTGCGTCACGTGAGA
AACTCGCCGCAGAGTACGAGGAAACAGTGGAAGTCTTCCAGTCCGTGAAG
CAGAGGAGGGCGCGGTACGAGGAGATCGAGGTGGCGCGGAAGAAAAATGT
CGAGGAGACTACAGATGGCCCCGAGCCGGAACCGGGAGGGTCTAGCAAGA
GCGGGATGAATGATACAGACACCACATATTAG back to top
|