mRNA_H-paniculata_contig7961.15988.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig7961.15988.1 vs. uniprot
Match: D7FTH5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTH5_ECTSI) HSP 1 Score: 318 bits (815), Expect = 4.560e-91 Identity = 225/596 (37.75%), Postives = 280/596 (46.98%), Query Frame = 1
Query: 133 KSIEESGLEPIQPKGFIYHETRCGSTLVANMLAALPPSRVFSESKPPVQGIRTCKDDGCDDETINKVLRGTITLMGRRRSEGEHHEHLYFKFQNSKFLPELTRAYPKVPWVFVFRDPVEVMVSNLKNLDAGPCVRIPRQEVIKKNLLQEKIVEMRDGDGDGXXXXXXXXXXXXGAKRGGGANKTRRLPVQTDENRYSR-RLSGSGTWQAWEEEGEEDGLESPGGSGAGGVD-FVVNNGVEMGGWVVDENWWEDNGGDDYDDEAGTGKFLRGEGYARERLEEPRVDGAIGNDGGWLLYDHTGVVKYSDDDYYASVSMMGSXXXXXXXXXXSLAVKGPYGSSGSDSAQPSSLPSPPPPLVRGGGRMQIPPVFEDAVLYRDMDVSYSSDFSSSCSSTEFSPEDITEYHWQERGQLRGGGGAETVATEIRLRAEKEFRHLESGGGALATERRQLLVKRSAFKSRKPESLSLGMCEECADWLKLMCDYAVEAGHLTPENALFVDYSNLPDAVPEHVFPVHFDMAGEIDETVPNWKDLMYEAAGVYSKGGPRRKGEFKDDAEAKHKSASPLIIETADKKGGLYDSYRTLDSLQSWRRPEK*E 1914
KS+ + G P+ PKGFIYHETRCGSTLVANMLA L PSRVFSESKPP Q IR C GCD + K+ R T+ LMGRRR+ GE HEHLYFKFQNSK +++ AYP+VPWVFVFRDPVEVMVSNLK+ PCVRIPRQE ++K ++ + G G+ A+ KTR ++ R R GS W G E G G G +V V +GG E G G V+ D D+YASVS G S + S LP P + A L+ E SP + + ER RR L K++ + L++ M ECA+WL+ MC +A+ A TP ALFVDY+NLPDAVPE+VFP HF M E+ ETVP+WKD M+EAAG YSKG +R EF +D + KHK ASPLI+E ++K GGLY+ YR+L+ +QSWRRP+ E
Sbjct: 186 KSMADEGRAPLPPKGFIYHETRCGSTLVANMLATLAPSRVFSESKPPTQTIRECLTAGCDRHLLVKMFRNTMALMGRRRN-GEQHEHLYFKFQNSK---QISEAYPEVPWVFVFRDPVEVMVSNLKSYAGAPCVRIPRQEKLRKQASRK--FKKLGGGGE------PAMLKSKAARDAAALQKTR--------PKFGRGRGRGSEPW----------GREPEGVRGGGKRSRSLVEAAVVLGGSAPGE---------------GVTATANGVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEDGDSDFYASVSWSGGI---------------------SGGIESSDLPL-------------YPAAYSSAALF------------------EPSPWESAAFGADER-------------------------------------RRSLATKKTG------QMLTMNMTMECANWLQAMCAFALAAEKETPSKALFVDYANLPDAVPEYVFPQHFGMEAEVAETVPDWKDRMFEAAGSYSKGLGKRTKEFTNDVKEKHKDASPLIVEASEKDGGLYEVYRSLEVMQSWRRPDSEE 641
BLAST of mRNA_H-paniculata_contig7961.15988.1 vs. uniprot
Match: A0A7S3ZKE9_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZKE9_9STRA) HSP 1 Score: 137 bits (344), Expect = 2.050e-30 Identity = 73/179 (40.78%), Postives = 110/179 (61.45%), Query Frame = 1
Query: 10 PSNTPMFANLMSVSKCGNEKRKNPERVGVGAASLVRMSSLLKSIEESGLEPIQPKGFIYHETRCGSTLVANMLAALPPSRVFSESKPPVQGIRTCKDDGCDDETINKVLRGTITLMGRRRSEGEHHEHLYFKFQNSKF--LPELTRAYPKVPWVFVFRDPVEVMVSNLKN-LDAGPCVR 537
PS TPMF +L S S+CG R G +++L + + + ++P++P GF++HE+R GSTLVANMLAA+P + V+SES PP + C+ C + +L+ I LMG S +H HL+FKFQ++ + L A+P+ PW+FV+RDPV+ M+S+ KN + GPC+R
Sbjct: 138 PSKTPMFRDLASASRCGRG------RAGT-------LNTLYEDMRKKNIKPVKPSGFVFHESRVGSTLVANMLAAVPTNIVYSESAPPPAVLNHCRS--CSKQRKTDILQKLIALMGA--SPTNYHTHLFFKFQSATVPNIRSLLDAFPETPWLFVYRDPVQTMMSHFKNGVGNGPCLR 299
BLAST of mRNA_H-paniculata_contig7961.15988.1 vs. uniprot
Match: A0A6H5K3E4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3E4_9PHAE) HSP 1 Score: 129 bits (324), Expect = 3.850e-28 Identity = 77/170 (45.29%), Postives = 100/170 (58.82%), Query Frame = 1
Query: 1 QDNPSNTPMFANLMSVSKCGNEKRKNPERVGVGAASLVRMSSLLKSIEESGLEPIQPKGFIYHETRCGSTLVANMLAALPPSRVFSESKPPVQGIRTCKDDGCDDETINKVLRGTITLMGRRRSEGEHHEHLYFKFQNSKFLPELTRAYPKVPWVFVFRDPVEVMVSNLK 510
Q+ P PM L S+C K +N R+S L + E E +QP GF+YHETR GSTLVANMLA +P + V SE+ +R C D C + +LR +TL+G R+ HEHL+FKFQ+S LP + +AYP+V WV++FRDPVEVMVSNLK
Sbjct: 188 QETPWKYPMAVMLQKKSECS--KAENLRSF--------RLSDLRTYMREHPEEFLQPNGFVYHETRTGSTLVANMLAHVPSNLVVSENNMAEDPVRRCSD--CTEMQKVALLREIMTLLGNGRNG---HEHLFFKFQDSTTLPLMMKAYPEVGWVYLFRDPVEVMVSNLK 342
BLAST of mRNA_H-paniculata_contig7961.15988.1 vs. uniprot
Match: A0A835ZD42_9STRA (N-acetyltransferase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD42_9STRA) HSP 1 Score: 130 bits (328), Expect = 6.080e-27 Identity = 72/156 (46.15%), Postives = 95/156 (60.90%), Query Frame = 1
Query: 148 SGLEPIQPKGFIYHETRCGSTLVANMLAALPPSRVFSESKPPVQGIRTCK----------DDGCDDETINKVLRGTITLMGRRRSEGEHHEHLYFKFQNSKFLPELTRAYPKVPWVFVFRDPVEVMVSNLKNLD-AGPCVRIPRQEVIKKNLLQEK 582
S + +Q GF++H+TRCGSTLVAN LA LP +RVFSES+PPVQ +R D D+ NK +G + LM R R + E HE ++FKF P +T +P VPWV++FRDPVEVMVSN+ + A PCVR E ++ LQ+K
Sbjct: 725 SDADALQLGGFVFHDTRCGSTLVANQLAILPENRVFSESRPPVQCLRMYTGYQAVDPERPDLKMDEALFNKCFKGVLALMKRARGDAEPHERIFFKFA-----PVVTSMFPDVPWVYLFRDPVEVMVSNIGRGELAAPCVR----EGVRAARLQQK 871
BLAST of mRNA_H-paniculata_contig7961.15988.1 vs. uniprot
Match: A0A4D9CT70_9STRA (JmjC domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CT70_9STRA) HSP 1 Score: 129 bits (325), Expect = 9.200e-27 Identity = 59/136 (43.38%), Postives = 88/136 (64.71%), Query Frame = 1
Query: 136 SIEESGLEPIQPKGFIYHETRCGSTLVANMLAALPPSRVFSESKPPVQGIRTCKDDGCDDETINKVLRGTITLMGRRRSEGEHHEHLYFKFQNSKFLPE--LTRAYPKVPWVFVFRDPVEVMVSNLKNLDAGPCVR 537
+++E + +QP GFI+HE+R GSTLVANMLA++P + V+SE P I CK GC +ET ++LR I MGR HH+H + KF +S + + +A+P+ PW +++RDPVE++VSN + GPC+R
Sbjct: 202 AVDERAGKQLQPTGFIFHESRVGSTLVANMLASVPTNLVYSEPSVPAHVIHLCKSAGCSEETTVRLLRMAILAMGR----SHHHDHFFIKFSSSTVVDMDLILKAFPETPWAYIYRDPVEIIVSNFQRGRGGPCIR 333
BLAST of mRNA_H-paniculata_contig7961.15988.1 vs. uniprot
Match: D7G7C8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7C8_ECTSI) HSP 1 Score: 123 bits (309), Expect = 1.490e-25 Identity = 80/193 (41.45%), Postives = 104/193 (53.89%), Query Frame = 1
Query: 1 QDNPSNTPMFANLMSVSKCGNEKRKNPERVGVGAASLVRMSSLLKSIEESGLEPIQPKGFIYHETRCGSTLVANMLAALPPSRVFSESKPPVQGIRTCKDDGCDDETINKVLRGTITLMGRRRSEGEHHEHLYFKFQNSKFLPELTRAYPKVPWVFVFRDPVEVMVSNLK--------NLDAGPCVRIPRQEV 555
Q+ P PM L S C K +N +S L + E E +QP GF+YHETR GSTLVANMLA +P + V SES +R C C + +LR +TL+G R+ H+HL+FKFQ+S LP + +AYP+V WV++FRDPVEVMVSNLK G CV R+E+
Sbjct: 64 QETPWKYPMAVMLQKKSGCS--KAENLRSF--------HLSDLRTYMREHPEEFLQPNGFVYHETRTGSTLVANMLAHVPSNLVVSESNMAEDPVRRCSH--CTEMQKVTLLREIMTLLGNGRNG---HKHLFFKFQDSTTLPLMMKAYPEVGWVYLFRDPVEVMVSNLKCFANRPEKQQAMGSCVAELRREL 241
BLAST of mRNA_H-paniculata_contig7961.15988.1 vs. uniprot
Match: A0A6H5KRY1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRY1_9PHAE) HSP 1 Score: 120 bits (301), Expect = 1.890e-24 Identity = 69/162 (42.59%), Postives = 95/162 (58.64%), Query Frame = 1
Query: 22 PMFANLMSVSKCGNEKRKNPERVGVGAASLVRMSSLLKSIEESGLEPIQPKGFIYHETRCGSTLVANMLAALPPSRVFSESKPPVQGIRTCKDDGCDDETINKVLRGTITLMGRRRSEGEHHEHLYFKFQNSKFLPELTRAYPKVPWVFVFRDPVEVMVSNL 507
PM L S C + KR + +V MS+L + +EES + P GFI+HETRCGSTLVANMLA++ + ++SES P + + TC C E I LR + M R H+H YFKFQ+S+ + +T AYP PW+F+FR+P+EVM+S L
Sbjct: 233 PMGGLLSIASGCADLKRDTVQ--------IVHMSTLKRLLEESTVPIPPPTGFIFHETRCGSTLVANMLASVETNVMWSESTGPWKVMHTCPK--CHKEQIVPWLRVIMDAMTR----SARHKHFYFKFQSSEDIDAVTSAYPDTPWIFIFREPIEVMMSRL 380
BLAST of mRNA_H-paniculata_contig7961.15988.1 vs. uniprot
Match: A0A7S2PP86_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PP86_9STRA) HSP 1 Score: 116 bits (291), Expect = 2.420e-24 Identity = 71/201 (35.32%), Postives = 112/201 (55.72%), Query Frame = 1
Query: 10 PSNTPMFANLMSVSK-CGNEKRKNPERVGVGAASLVRMSSLLKSIEESGLEPIQPKGFIYHETRCGSTLVANMLAALPP--SRVFSESKPPVQGIRTCKDDGCDDETINKVLRGTITLMGRRRSEGEHHEHLYFKFQNSKFLP-ELTR-AYPKVPWVFVFRDPVEVMVSNLKNLDAGPCVRIPRQEVIKKNLLQEKIVEMR 597
PS MF L++ S C + + + + AA L +E ++ +QP GF++HE+RCGSTLVAN LAA P SRV++ES PP + C C+ + + LMGR E EHL+FKFQ+ L ++ R A+P VPW++V+RDPV+VM+S+L ++ C++ R+ + L +++V+ +
Sbjct: 142 PSANAMFRELVTESPDCTHNRFMMDIKTVIDAA-------LEHDLESQDVKVLQPTGFVFHESRCGSTLVANSLAAFAPERSRVYTESTPPSSVLVACPSGQCNKGKQADLFSDVLYLMGRTTDLKE--EHLFFKFQSITSLNIDVARLAFPSVPWIYVYRDPVQVMMSHLNPIEHAVCLKHKRKPKQEMQALVQRVVQKK 333
BLAST of mRNA_H-paniculata_contig7961.15988.1 vs. uniprot
Match: A0A7S2PC56_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PC56_9STRA) HSP 1 Score: 112 bits (279), Expect = 4.620e-24 Identity = 56/121 (46.28%), Postives = 81/121 (66.94%), Query Frame = 1
Query: 163 IQPKGFIYHETRCGSTLVANMLAALPP--SRVFSESKPPVQGIRTCKDDGCDDETINKVLRGTITLMGRRRSEGEHHEHLYFKFQN--SKFLPELTRAYPKVPWVFVFRDPVEVMVSNLKN 513
++P GF++HE+RCGSTLVAN+LAA P SRV++ES PP + C+ C+ + + R + LMGR E +HL+FKFQ+ S + + A+P VPW+FV+RDPV+VM+S+L N
Sbjct: 29 LEPTGFVFHESRCGSTLVANILAAFAPERSRVYTESPPPASVLTACRTSRCNPKKQAALFRDVLYLMGRTNDLME--KHLFFKFQSISSLHVDIVQLAFPDVPWIFVYRDPVQVMMSHLAN 147
BLAST of mRNA_H-paniculata_contig7961.15988.1 vs. uniprot
Match: K0RW46_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RW46_THAOC) HSP 1 Score: 117 bits (293), Expect = 1.200e-23 Identity = 81/212 (38.21%), Postives = 113/212 (53.30%), Query Frame = 1
Query: 10 PSNTPMFANLMSVSKCGNEKRKNPERVG-VGAASLVR-MSSLLKSIEESGLEPIQPKGFIYHETRCGSTLVANMLAALPP--SRVFSESKPPVQGI-RTCKDD--GCDDETINKVLRGTITLMGRRRSEGEHHEHLYFKFQN--SKFLPELTRAYPKVPWVFVFRDPVEVMVSNLK--NLDAGPCVRIPRQEVIKKNLLQEKIVEMRDGDGD 612
P PMF +++ S C N RV V A LVR + + S + SG + KG ++HE+RCGSTL AN + AL P +RVFSES+PPV+ + TC +D C VLR I LMGR S+ E L+FKFQ+ S+ L A+P P++F++RDPVEVM+S L CV R + ++E +M + D +
Sbjct: 164 PPEQPMFKDVVRFSNCEGGAASNMIRVDLVEAVQLVREFDADVASQDASGPTVLDLKGVVFHESRCGSTLAANTMMALNPETNRVFSESRPPVEALMHTCGEDYSECSARAAANVLRDVIYLMGR--SDDTKEESLFFKFQSVTSRTLAVFRLAFPTTPFIFLYRDPVEVMMSQLDMPRPSKANCVASKRSSPLVHKFVKETPYQMDELDNE 373 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7961.15988.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig7961.15988.1 >prot_H-paniculata_contig7961.15988.1 ID=prot_H-paniculata_contig7961.15988.1|Name=mRNA_H-paniculata_contig7961.15988.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=629bp MFANLMSVSKCGNEKRKNPERVGVGAASLVRMSSLLKSIEESGLEPIQPKback to top mRNA from alignment at H-paniculata_contig7961:551..9636+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig7961.15988.1 ID=mRNA_H-paniculata_contig7961.15988.1|Name=mRNA_H-paniculata_contig7961.15988.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=9086bp|location=Sequence derived from alignment at H-paniculata_contig7961:551..9636+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig7961:551..9636+ >mRNA_H-paniculata_contig7961.15988.1 ID=mRNA_H-paniculata_contig7961.15988.1|Name=mRNA_H-paniculata_contig7961.15988.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3774bp|location=Sequence derived from alignment at H-paniculata_contig7961:551..9636+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |