mRNA_H-paniculata_contig7938.15966.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig7938.15966.1 vs. uniprot
Match: D7FX27_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FX27_ECTSI) HSP 1 Score: 690 bits (1780), Expect = 2.210e-223 Identity = 515/1205 (42.74%), Postives = 628/1205 (52.12%), Query Frame = 1
Query: 58 AFPALPGSSCCLENGDWPLDPHEILLNPRDLDKLRVPAYGYVLISSSADASATSDSSGEGDVSRKSSVRNSEDGLH---------------------TFCRVVPEDSLSPGEARAPGWTLRALG--DAEHLVVKKAVTDRGNGDAVSEVELVV----HDASSQRHLSAAGSTIYGRACGLGKTSNEPDKFVGD---------VSRHLDLG--------RAIARRCCGCMVRPGSLLGAEILGETLILRVESIAVNDKSNALFNSGGASAASAVVAGCGAAAGDGG-VVPLSIPASGCSTVEHHHNGSMLRDNATGTATGANDEDRQYRCTRFHGMTDGKKFALFLIDPKTEVTLLKARVASVA-DGVLVKRGGGRKQQFSAR-------CGGRKDLWTQRAPSLEPVLDELHSLVLLAVGRLNGADLTVTRPRGGTEVSYQNHSSSGGKTLRALDILPNNIIICGPSGVGKTLALDVLAEDVRERHGVHVIRVLGPEVLAGLSHGGGRAID-------SAAGLMAGSFLAQSLATARNRAPSILILDELDAVFDSMGEGVDAGSAA-LTEGARAGAALLAILDSASSTAGAGVAVVGATRYSFAEAGGAGWADQKESEGGEGIGWAGTAIPAAFRKPGRFDRCVEIGPPTQAGRERILRVLLDVPGW----QLKPSRSGWRSSSAKTSERWAQTDAEGLLPLESQDVTT----RFPR-----------GTADEEGGGIPDDRETL-----------------REWARRLSSLTPGMLGGDLDRLVRTARAGAASRSRINSTSREPGAIDTRGENKNISSPLQSRSPACAAIASVRASCAAASKTNLSLTNGSLLLTWQDVMRAVAVTVPRSLKGMDIASSSHDASSGDSGG-----GPTWASVGGFSKSRRRLQRLVQWPWQHPEAFAKMGISAPAGALLYGPSGCGKSLVAQVLANECLANFVWVRSSELLSRYLGETEAKLRALFARARAAAPCILFLDELDSITAKRGDGGXXXXXXXXXXX--VYARVLSTLLNEMDGVAGGGALQPKRLASVPVSDTNAVGSCAGSSSSSVGATCAEEGEAGADRAAGGVLVLAATSRRDMLDSALLRPGRLHESVEFGMPEKEDREEVLRVHTRRLPL-AGGVDLERLSRDDVSGGLNCADLEASCRDAAMMAMREDLHGAPEVRAEHLRSALEERAVG 3357
AFP+ GSSCCL +GDWPLDPHEIL++P+DL+ LRVP +GYV ++ ++ SG+ D SR +CR VP+DSL+PGE RAP W L A G +HL + + V E E + D Q HL + L E D G+ +S+++ G RAIARR GCMVR GSLL AE+LGET+++RV I+ + DGG P+ P + G K AL + P+ + ++R + V+ DG V GG + ++ R G + W ++AP LE L EL +LVLL+VG SSGG +LP + +CGPSGVGKTL+LD+LAED+ E HGVHVIR+LGP++LAG GG SAA L +L+ AR RAPS+L+ DELDA+FD+ G G + G A L EGARA AALL LD AS+ G VAV+GATR S GGAGW +E EGG G G A+PAAFRKPGRFDRCV IGPPTQA RE IL ++L +L+P + ++ S + + ++ + S+D R PR G + G +R+T EWA+RLSSLTPGM+GGDL+RLVRTARA + R R D G+ SP + L W+DVM AVA+TVPRSL+G+D+AS+ GPTW SVGGFSK++RRLQRLVQWPW HPEAFA+MG+SAPAGALLYGPSGCGKSLVAQVLA ECLANF+WVRSSELLSRYLGETEAKLRALF+RARAAAPCILFLDELD+ITAKRGDGGXXXXXXXXXXX V+ARVLSTLLNEMDGVA G AAT+RR LD+ALLRPGRLHESVE G P +EDRE VLRVH RLP A G+DL RLS+DDVSGGL CADLEA+CR+AAMMAMREDLHGA E+ A + E G
Sbjct: 5 AFPSSEGSSCCLGSGDWPLDPHEILVHPQDLEHLRVPGFGYVAVN-------RNNGSGDADSSRSKGXXXXXXXXXXXXXXXXXXXXXXXXXRQKPLAYCRAVPDDSLAPGETRAPAWLLSAAGVQPRQHLSISRP-------SEVQEAENLAVPLGGDDQQQHHLPRVRVGL-----ALEHRQGEEDASAGNRPSPAGNGIISQNVRSGGYVSKCDSRAIARRVSGCMVRDGSLLAAEVLGETVLMRVMGISCGND-------------------------DGGDASPVKRPLI---------------------------------------INSGTKVAL--VGPQEQE---RSRSSPVSWDGQPVSPGGEQSRRRRPRRRPQQQATKGCTETWARQAPGLEAALSELRALVLLSVG-----------------------GSSGGAWS---GVLPAGVALCGPSGVGKTLSLDLLAEDLSENHGVHVIRLLGPQILAGSGQGGXXXXXXXXXXXASAASSPLQGPLGLALSEARARAPSVLVFDELDALFDACGGGDEGGDTAPLGEGARANAALLEALDRASAIKG--VAVLGATRRSPGGKGGAGWVGLEEGEGG---GGDGAALPAAFRKPGRFDRCVAIGPPTQAQREGILSMVLSTVAGAAELELEPLSTALQARPIAGSPPDEMSSGKPVV-IASRDAPDLEPEREPRTIFADKDDARGGRGEGRGSSGRAERKTXXXXXXXXXXXXXXXAIAEEWAKRLSSLTPGMVGGDLERLVRTARARSLQRGR-----------DLAGQQTTQPSPPR-------------------------------FLMWEDVMAAVAITVPRSLQGLDVASAGSXXXXXXXXXXXXXRGPTWRSVGGFSKAKRRLQRLVQWPWLHPEAFARMGVSAPAGALLYGPSGCGKSLVAQVLATECLANFLWVRSSELLSRYLGETEAKLRALFSRARAAAPCILFLDELDAITAKRGDGGXXXXXXXXXXXGSVHARVLSTLLNEMDGVASGXXXXXXXXXXXXXXXXXXXX----------------------------XXXXAATNRRGALDAALLRPGRLHESVELGFPGREDREGVLRVHAGRLPRGAAGIDLARLSQDDVSGGLTCADLEAACREAAMMAMREDLHGAREMSATEPKPGAESPGSG 1019
BLAST of mRNA_H-paniculata_contig7938.15966.1 vs. uniprot
Match: A0A0F7IC44_9EURY (AAA family ATPase, CDC48 subfamily n=1 Tax=Geoglobus ahangari TaxID=113653 RepID=A0A0F7IC44_9EURY) HSP 1 Score: 231 bits (588), Expect = 1.840e-59 Identity = 209/694 (30.12%), Postives = 308/694 (44.38%), Query Frame = 1
Query: 1270 PNNIIICGPSGVGKTLALDVLAEDVRERHGVHVIRVLGPEVLA---GLSHGGGRAIDSAAGLMAGSFLAQSLATARNRAPSILILDELDAVFDSMGEGVDAGSAALTEGARAGAALLAILDSASSTAGAGVAVVGATRYSFAEAGGAGWADQKESEGGEGIGWAGTAIPAAFRKPGRFDRCVEIGPPTQAGRERILRVLLDVPGWQLKPSRSGWRSS------SAKTSERWAQTDAEGLLPLESQDVTTRFPRGTADEEGGGIPDDRETLREWARRL--------SSLTPGMLGGDLDRLVRTARAGAASRSRINSTSREPGAIDTRGENKNISSPLQSRSPACAAIASVRASCAAASKTNLSLTNGSLLLTWQDV----MRAVAVTVPRSLKGMDIASSSHDASSGDSGGGPTWASVGGFSKSRRRLQRLVQWPWQHPEAFAKMGISAPAGALLYGPSGCGKSLVAQVLANECLANFVWVRSSELLSRYLGETEAKLRALFARARAAAPCILFLDELDSITAKRGDGGXXXXXXXXXXXVYARVLSTLLNEMDGVAGGGALQPKRLASVPVSDTNAVGSCAGSSSSSVGATCAEEGEAGADRAAGGVLVLAATSRRDMLDSALLRPGRLHESVEFGMPEKEDREEVLRVHTRRLPLAGGVDLERLSRDDVSGGLNCADLEASCRDAAMMAMRE 3288
P +++ GP G GKTL +A +V H I + GPE+++ G S L + A+ APSI+ +DE+D++ E R A LL ++D A V V+GAT A+ A R+PGRFDR +EIG P + GR+ IL++ G ++P S RS K+SER+ + E ++ + G+ DE + +D E E RL + LT G +G DL L + A A A R R+ E G ID E + + L+S L +T L +++ MR V V VP W +GG K+++ L+ V+WP ++PE F ++GI P G LLYGP G GK+L+A+ +ANE ANF+ V+ ELLS+++GE+E +R +F +AR APCI+F DE+DS+ +RG G V RV+S LL E+DG+ + D V+V+AAT+R DM+D ALLRPGR+ + P+KE R+E+ R+HTR +PLA V+LE L+ + + G + AD+EA CR+A + A+RE
Sbjct: 212 PKGVLLHGPPGTGKTLIAKAVANEVD----AHFISISGPEIMSKYYGESE---------------QRLREIFEEAKENAPSIIFIDEIDSIAPKREEVTGEVER------RVVAQLLTLMDGLE--ARGQVIVIGATNRP-------------------------DAVDPALRRPGRFDREIEIGVPDKEGRKEILQI--HTRGMPIEPDYS--RSEVLRILEEFKSSERFDREKVERIIEKVEK-------AGSEDEVISALKEDEEIFSEVKARLIDEMFDYIAELTNGFVGADLAALAKEA-AMHALRKRM-----EKGEIDIEAE-EIPAEVLES----------------------LKVTMDDFLEALKNIEPSAMREVLVEVPN----------------------VKWDDIGGLEKAKQELREAVEWPMKYPELFREVGIKPPKGILLYGPPGTGKTLLAKAVANESNANFISVKGPELLSKWVGESEKHVREMFRKARQVAPCIIFFDEIDSLAPRRGGIGDSH--------VTERVVSQLLTELDGLE-------------ELKD---------------------------------VVVIAATNRPDMVDPALLRPGRIERHIYIPPPDKEARKEIFRIHTRNMPLAEDVNLEELA--EKTEGYSGADIEAVCREAGLTAIRE 735
BLAST of mRNA_H-paniculata_contig7938.15966.1 vs. uniprot
Match: A0A842LZY8_9EURY (CDC48 family AAA ATPase n=2 Tax=Archaeoglobi archaeon TaxID=2250530 RepID=A0A842LZY8_9EURY) HSP 1 Score: 228 bits (582), Expect = 9.490e-59 Identity = 204/696 (29.31%), Postives = 302/696 (43.39%), Query Frame = 1
Query: 1270 PNNIIICGPSGVGKTLALDVLAEDVRERHGVHVIRVLGPEVLAGLSHGGGRAIDSAAGLMAGSFLAQSLATARNRAPSILILDELDAVFDSMGEGVDAGSAALTEGARAGAALLAILDSASSTAGAGVAVVGATRYSFAEAGGAGWADQKESEGGEGIGWAGTAIPAAFRKPGRFDRCVEIGPPTQAGRERILRV-LLDVPGWQLKPSRSGWRSSSAKTSERWAQTDAEGLLPLESQDVTTRFPRGTADEEGGGIPDDRETLREWARRLSSL---TPGMLGGDLDRLVRTARAGAASRSRINSTSREPGAIDTRGENKNISSPLQSRSPACAAIASVRASCAAASKTNLSLTNGSLLLTWQDVMRAVAVTVPRSLKGMDIASSSHDASSGDSGGGPTWASVGGFSKSRRRLQRLVQWPWQHPEAFAKMGISAPAGALLYGPSGCGKSLVAQVLANECLANFVWVRSSELLSRYLGETEAKLRALFARARAAAPCILFLDELDSITAKRGDGGXXXXXXXXXXXVYARVLSTLLNEMDGVAGGGALQPKRLASVPVSDTNAVGSCAGSSSSSVGATCAEEGEAGADRAAGGVLVLAATSRRDMLDSALLRPGRLHESVEFGMPEKEDREEVLRVHTRRLPLAGGVDLERLSRDDVSGGLNCADLEASCRDAAMMAMREDLHGAPEVRAEHLRSALEE 3345
P +I+ GP G GKTL LA+ V G + GPE+++ R L + ARN APSI+ +DELD++ D S + R A LLA++D V V+GAT AI A R+PGRFDR +EIG P + GR I R+ + ++P L R + R ++ + G L E + + + R + + ET RE R L L T G +G D+ L R A R + K ++ L R + +T +D A+ P +++ + + W +GG ++ L+ V+WP +HPE F KMGI P G LLYGP G GK+L+A+ +ANE ANF++V+ E+LS+++GE+E +R +F RAR +PCI+F DE+D+I RG G V R+ LL EMDG+ EEG+ ++VLAAT+R D+LD ALLRPGR V P +E+R+++ +HTR++PLA V LE L+ +++ G +D+EA C++A M+A+RED + A V H R AL++
Sbjct: 221 PKGVILYGPPGTGKTL----LAKAVANEAGASFFSIAGPEIMSKYYGESERQ------------LREIFERARNEAPSIIFIDELDSIAPKR----DEVSGEVEH--RVVAQLLALMDGLEERGQ--VIVIGATNRI-------------------------NAIDPALRRPGRFDREIEIGVPDKNGRREIFRIHMRNIPIEVLSEEE---RLRLRELERRASEMRSRGELSGELERIESEIRR---------LKEIEETRRE--RMLDELVEETHGFVGADIAALCREAVMRVLRRY-----------LPEMDLEKELNQELLER----------------------------MHVTIEDFREALKEVEPSAMREIFVEVPE-----------VRWDDIGGLEDVKQELKEAVEWPLKHPEKFEKMGIKPPKGVLLYGPPGTGKTLLAKAVANESNANFIYVKGPEILSKWVGESEKAIREIFRRARQVSPCIIFFDEIDAIAPFRGFGDSSG--------VSERITDQLLTEMDGL--------------------------------------EEGKQ--------IIVLAATNRPDILDPALLRPGRFDRLVLLRAPNREERKKIFEIHTRKMPLAEDVSLEELA--EITEGYVGSDIEAVCKEAGMLALREDFN-AERVHMRHFREALKK 746
BLAST of mRNA_H-paniculata_contig7938.15966.1 vs. uniprot
Match: D3S1U4_FERPA (AAA family ATPase, CDC48 subfamily n=2 Tax=Ferroglobus placidus TaxID=54261 RepID=D3S1U4_FERPA) HSP 1 Score: 228 bits (580), Expect = 1.970e-58 Identity = 203/688 (29.51%), Postives = 302/688 (43.90%), Query Frame = 1
Query: 1270 PNNIIICGPSGVGKTLALDVLAEDVRERHGVHVIRVLGPEVLA---GLSHGGGRAIDSAAGLMAGSFLAQSLATARNRAPSILILDELDAVFDSMGEGVDAGSAALTEGARAGAALLAILDSASSTAGAGVAVVGATRYSFAEAGGAGWADQKESEGGEGIGWAGTAIPAAFRKPGRFDRCVEIGPPTQAGRERILRVLLDVPGWQLKPSRSGWRSSSAKTSERWAQTDAEGLLPLESQDVTTRFPRGTADEEGGGIPDDRETLREWARRL--------SSLTPGMLGGDLDRLVRTARAGAASRSRINSTSREPGAIDTRGENKNISSPLQSRSPACAAIASVRASCAAASKTNLSLTNGSLLLTWQDV----MRAVAVTVPRSLKGMDIASSSHDASSGDSGGGPTWASVGGFSKSRRRLQRLVQWPWQHPEAFAKMGISAPAGALLYGPSGCGKSLVAQVLANECLANFVWVRSSELLSRYLGETEAKLRALFARARAAAPCILFLDELDSITAKRGDGGXXXXXXXXXXXVYARVLSTLLNEMDGVAGGGALQPKRLASVPVSDTNAVGSCAGSSSSSVGATCAEEGEAGADRAAGGVLVLAATSRRDMLDSALLRPGRLHESVEFGMPEKEDREEVLRVHTRRLPLAGGVDLERLSRDDVSGGLNCADLEASCRDAAMMAMRE 3288
P +++ GP G GKTL +A +V H I + GPE+++ G S L + AR APSI+ +DE+D++ E R A LL ++D A V V+GAT AI A R+PGRFDR +EIG P + GR+ IL++ G ++P + R K ++ + + E +++ + + DE + + E RL + LT G +G DL L + A A A R RI E G ID E I + NL +T L +++ MR V V VP+ TW +GG +++ L+ V+WP+++PE F +GI P G LLYGP G GK+L+A+ +ANE ANF+ V+ ELLS+++GE+E +R +F +AR APC+LF DE+DS+ +RG GG V RV+S LL E+DG+ + D V+V+AAT+R DM+D ALLRPGRL + P+++ R E+ ++HTR +PL V+LE L++ + G + AD+EA CR+A M+A+RE
Sbjct: 213 PKGVLLYGPPGTGKTLIAKAVANEVN----AHFIPISGPEIMSKYYGESE---------------QRLREIFEEARENAPSIIFIDEIDSIAPKREEVTGEVER------RVVAQLLTLMDGLE--ARGQVIVIGATNRP-------------------------DAIDPALRRPGRFDREIEIGVPDREGRKEILQI--HTRGMPIEPDYN--RDDVIKVLKQLKEE--KRFEEKELEELIAKIEKAKEDEIKKILEEKESIFNEVRNRLIDLMLEELADLTVGFVGADLAALAKEA-AMHALRKRI-----ESGEIDVEAE--EIPEEVLE---------------------NLKVTKEDFLEALKNIEPSAMREVLVEVPK----------------------VTWNDIGGLEHAKQELREAVEWPFKYPELFKAVGIKPPKGILLYGPPGTGKTLLAKAVANESNANFISVKGPELLSKWVGESEKHVREMFRKARQVAPCVLFFDEIDSLAPRRGTGGDTH--------VTERVVSQLLTELDGLE-------------ELKD---------------------------------VVVIAATNRPDMIDPALLRPGRLERHIYIPPPDEKARLEIFKIHTRGMPLDEDVNLEELAKK--TEGYSGADIEAVCREAGMLAIRE 735
BLAST of mRNA_H-paniculata_contig7938.15966.1 vs. uniprot
Match: D2RDH5_ARCPA (AAA family ATPase, CDC48 subfamily n=2 Tax=Archaeoglobales TaxID=2231 RepID=D2RDH5_ARCPA) HSP 1 Score: 221 bits (564), Expect = 2.470e-56 Identity = 208/704 (29.55%), Postives = 304/704 (43.18%), Query Frame = 1
Query: 1270 PNNIIICGPSGVGKTLALDVLAEDVRERHGVHVIRVLGPEVLA---GLSHGGGRAIDSAAGLMAGSFLAQSLATARNRAPSILILDELDAVFDSMGEGVDAGSAALTEGARAGAALLAILDSASSTAGAGVAVVGATRYSFAEAGGAGWADQKESEGGEGIGWAGTAIPAAFRKPGRFDRCVEIGPPTQAGRERILRV-LLDVP-------GWQLKPSRSGWRSSSAKTSERWAQTDAEGLLPLESQDVTTRFPRGTADEEGGGIPD-DRETLREWARRLSSLTPGMLGGDLDRLVRTARAGAASRSRINSTSREPGAIDTRGENKNISSPLQSRSPACAAIASVRASCAAASKTNLSLTNGSLLLTWQDVMRAVAVTVPRSLKGMDIASSSHDASSGDSGGGPTWASVGGFSKSRRRLQRLVQWPWQHPEAFAKMGISAPAGALLYGPSGCGKSLVAQVLANECLANFVWVRSSELLSRYLGETEAKLRALFARARAAAPCILFLDELDSITAKRGDGGXXXXXXXXXXXVYARVLSTLLNEMDGVAGGGALQPKRLASVPVSDTNAVGSCAGSSSSSVGATCAEEGEAGADRAAGGVLVLAATSRRDMLDSALLRPGRLHESVEFGMPEKEDREEVLRVHTRRLPLAGGVDLERLSRDDVSGGLNCADLEASCRDAAMMAMREDLHGAPEVRAEHLRSALEE 3345
P +++ GP G GKTL +A ++ G + GPE+++ G S L + A+ APSI+ +DE+DA+ E R A LLA++D V V+GAT AI A R+PGRFDR +EIG P + GR IL++ ++P + L+ R+ +R + K Q + + LE ++ + EE I D +RE ++ + L+ T G +G D++ L + A A R ID E PL+ + S+ K +L MR V V VP+ TW VGG +R + V+WP ++PE F K GI P G LLYGP G GK+L+A+ +ANE ANF+ V+ ELLS++LGE+E +R +F +AR APCI+F DE+D+I RG RV++ LL E+DG+ EE E GV+V+ AT+R D++D ALLRPGR V P+K+ R + ++HTR +PLA VDLE L+ D++ G AD+EA CR+A M+A+RED++ A +V H AL +
Sbjct: 225 PKGVLLYGPPGTGKTLIAKAVANEI----GASFFTINGPEIMSKYYGESE---------------QRLREIFEEAKENAPSIIFIDEIDAIAPRRDEVTGEVER------RVVAQLLALMDGLEERGQ--VIVIGATNRI-------------------------DAIDPALRRPGRFDREIEIGVPDREGRFEILQIHTRNMPIEPEYRIDFVLEALRNIYRQYTDKEVLEAIQRTYDEVKILEDKEKIKEVVKKNLPEEI--IQDLEREIIKAMLKELADQTHGFVGADIEALCKEAAMKALRRYIPQ--------IDMNSEEI----PLE-------LLESM--------KVTYDDFKSALKEIEPSAMREVLVEVPK----------------------VTWNDVGGLEDVKREIIEAVEWPLKYPEKFKKFGIRPPKGVLLYGPPGTGKTLIAKAVANEANANFISVKGPELLSKWLGESEKAVRKIFKKARQVAPCIIFFDEIDAIAGMRG---------IEENRAVERVVNQLLTELDGL--------------------------------------EELE--------GVVVIGATNRPDIIDPALLRPGRFDRLVYVRPPDKKSRLAIFKIHTRNMPLAEDVDLEELA--DMTEGYVGADIEAVCREAVMLALREDIN-AEKVHMRHFLEALRK 767
BLAST of mRNA_H-paniculata_contig7938.15966.1 vs. uniprot
Match: A0A0F7IHB9_9EURY (AAA family ATPase, CDC48 subfamily n=1 Tax=Geoglobus ahangari TaxID=113653 RepID=A0A0F7IHB9_9EURY) HSP 1 Score: 219 bits (558), Expect = 1.470e-55 Identity = 209/708 (29.52%), Postives = 303/708 (42.80%), Query Frame = 1
Query: 1270 PNNIIICGPSGVGKTLALDVLAEDVRERHGVHVIRVLGPEVLAGLSHGGGRAIDSAAGLMAGSFLAQSLATARNRAPSILILDELDAVFDSMGEGVDAGSAALTEGARAGAALLAILDSASSTAGAGVAVVGATRYSFAEAGGAGWADQKESEGGEGIGWAGTAIPAAFRKPGRFDRCVEIGPPTQAGRERILRV----LLDVPGWQLK---PSRSGWRSSSAKTSE-RWAQTD--AEGLLPLESQD-----VTTRFPRGTADEEGGGIPDDRETLREWARRLSSLTPGMLGGDLDRLVRTARAGAASRSRINSTSREPGAIDTRGENKNISSPLQSRSPACAAIASVRASCAAASKTNLSLTNGSLLLTWQDVMRAVAVTVPRSLKGMDIASSSHDASSGDSGGGPTWASVGGFSKSRRRLQRLVQWPWQHPEAFAKMGISAPAGALLYGPSGCGKSLVAQVLANECLANFVWVRSSELLSRYLGETEAKLRALFARARAAAPCILFLDELDSITAKRG-DGGXXXXXXXXXXXVYARVLSTLLNEMDGVAGGGALQPKRLASVPVSDTNAVGSCAGSSSSSVGATCAEEGEAGADRAAGGVLVLAATSRRDMLDSALLRPGRLHESVEFGMPEKEDREEVLRVHTRRLPLAGGVDLERLSRDDVSGGLNCADLEASCRDAAMMAMREDLHGAPEVRAEHLRSALEE 3345
P +++ GP G GKTL +A ++ G + GPE+++ +G L + A+ +PSI+ +DE+DA+ E R A LL ++D V V+GAT A+ A R+PGRFDR +EIG P + GR IL++ + P + L+ P+ R S + + RW D E + +E D V P +E RE +R R L+ T G +G D++ L + A A R + N++ P + SVR +S SL MR V V VP+ TW VGG +R + V+WP ++PE F K GI P G LLYGP G GK+L+A+ +ANE ANF+ V+ SELLS++LGE+E +R +F +AR APCI+F DE+D+I RG D G RV++ LL EMDG+ EE + GV+V+ AT+R D+LD ALLRPGR V P+K R + R+HT+ +PLA VDLE L+ ++ G AD+EA CR+A M+A+RE+L+ A ++ H A+ +
Sbjct: 224 PKGVLLHGPPGTGKTLIAKAVANEI----GASFFTINGPEIMSKF-YGESE-----------QRLREIFEEAKENSPSIIFIDEIDAIAPRRDEVTGEVER------RVVAQLLTLMDGLEERGQ--VIVIGATNRI-------------------------EAVDPALRRPGRFDREIEIGVPDREGRFEILQIHTRNMPLEPDYSLEFVIPALESLRESLRENGDVRWRDIDFFMEEVRDMEKADEIRKAVENMLPSDLREELS------REIIRAMLRYLADQTHGFVGADIEALCKEAAMKALRRI-----------LPKIDLNEDTIPPE--------VLESVR--------VTMSDFKESLKEIEPSAMREVFVEVPKI----------------------TWDDVGGLEDVKREIVEAVEWPLRYPEKFKKFGIRPPKGILLYGPPGTGKTLIAKAVANESEANFISVKGSELLSKWLGESEKAVRKIFRKARQVAPCIVFFDEIDAIAQMRGIDEGSR---------AVERVVNQLLTEMDGL--------------------------------------EELD--------GVVVIGATNRPDILDPALLRPGRFDRLVYVRPPDKASRYAIFRIHTKDMPLADDVDLEELAT--ITEGYVGADIEAVCREAVMLALRENLN-AEKIEMRHFLEAIRK 769
BLAST of mRNA_H-paniculata_contig7938.15966.1 vs. uniprot
Match: A0A0W8C9D5_PHYNI (Cell division cycle protein 48 n=13 Tax=Phytophthora TaxID=4783 RepID=A0A0W8C9D5_PHYNI) HSP 1 Score: 217 bits (552), Expect = 1.110e-54 Identity = 141/346 (40.75%), Postives = 205/346 (59.25%), Query Frame = 1
Query: 2335 WQDVMRAVAVTVPRSLKGMDIASSSHDASSGDSGGGPTWASVG--GFSKSRRRLQRLVQWPWQHPEAFAKMGISAPAGALLYGPSGCGKSLVAQVLANECLANFVWVRSSELLSRYLGETEAKLRALFARARAAAPCILFLDELDSITAKR----GDGGXXXXXXXXXXXVYARVLSTLLNEMDGVAGGGALQPKRLASVPVSDTNAVGSCAGSSSSSVGATCAEEGEAGADRAAGGVLVLAATSRRDMLDSALLRPGRLHESVEFGMPEKEDREEVLRVHTRRLPLAGGVDLERLS-RDDVSGGLNCADLEASCRDAAMMAMREDLHGAPEVRAEHLRSALEERA 3351
W ++++A P L+ +++AS G P + G++ +++L V W + A ++GIS +G LL GPSGCGK+L+ Q LA + NFV V+SSELLS+YLG++E +R LFARARAA+PC+LF DE DSI KR GDGG VYARVLST LNEMDGV +R+ + VS T +G + AD +GG+LV+AAT+R+D LD+AL+RPGR+ ++VE G P +ED E++L ++TR++PLA V+++ L+ R S AD+ A C++AA A+RED+ A VR++H +A ++RA
Sbjct: 506 WTELLQAQQQVKPSQLRELNVASP----------GAPVDGKLAFAGYTAVQKQLFDFVSWKFHPTNAMNRLGISNASGILLSGPSGCGKTLLVQTLAAKAKVNFVSVKSSELLSKYLGDSEKAVRLLFARARAASPCLLFFDEFDSIAHKRSFGEGDGGSSGGG------VYARVLSTFLNEMDGVGS------QRVTASSVSRT--------------------KGLSTAD--SGGILVVAATNRKDALDAALVRPGRIDKTVEIGFPTQEDIEDILALYTRKMPLADDVNIQELAARSRGSRTFTGADIAAICKEAAFRALREDIE-AKTVRSQHFEAAWDQRA 806
BLAST of mRNA_H-paniculata_contig7938.15966.1 vs. uniprot
Match: A0A7C3UE99_9EURY (AAA family ATPase n=4 Tax=Geoglobus ahangari TaxID=113653 RepID=A0A7C3UE99_9EURY) HSP 1 Score: 216 bits (551), Expect = 1.150e-54 Identity = 206/710 (29.01%), Postives = 303/710 (42.68%), Query Frame = 1
Query: 1270 PNNIIICGPSGVGKTLALDVLAEDVRERHGVHVIRVLGPEVLAGLSHGGGRAIDSAAGLMAGSFLAQSLATARNRAPSILILDELDAVFDSMGEGVDAGSAALTEGARAGAALLAILDSASSTAGAGVAVVGATRYSFAEAGGAGWADQKESEGGEGIGWAGTAIPAAFRKPGRFDRCVEIGPPTQAGRERILRV----LLDVPGWQLK---PSRSGWRSSSAKTSE-RWAQTD--AEGLLPLESQD-----VTTRFPRGTADEEGGGIPDDRETLREWARRLSSLTPGMLGGDLDRLVRTARAGAASRSRINSTSREPGAIDTRGEN--KNISSPLQSRSPACAAIASVRASCAAASKTNLSLTNGSLLLTWQDVMRAVAVTVPRSLKGMDIASSSHDASSGDSGGGPTWASVGGFSKSRRRLQRLVQWPWQHPEAFAKMGISAPAGALLYGPSGCGKSLVAQVLANECLANFVWVRSSELLSRYLGETEAKLRALFARARAAAPCILFLDELDSITAKRG-DGGXXXXXXXXXXXVYARVLSTLLNEMDGVAGGGALQPKRLASVPVSDTNAVGSCAGSSSSSVGATCAEEGEAGADRAAGGVLVLAATSRRDMLDSALLRPGRLHESVEFGMPEKEDREEVLRVHTRRLPLAGGVDLERLSRDDVSGGLNCADLEASCRDAAMMAMREDLHGAPEVRAEHLRSALEE 3345
P +++ GP G GKTL +A ++ G + GPE+++ +G L + A+ APSI+ +DE+D++ E R A LL ++D V V+GAT AI A R+PGRFDR +EIG P + GR IL++ + P + L+ P+ + + + + R+ D E + LE ++ + + P +E DRE ++ R ++ T G +G D++ L + A A R ID E + I L K + SL MR V V VP W VGG +R + V+WP ++PE F K GI P G LLYGP G GK+L+A+ +ANE ANF+ V+ SELLS++LGE+E +R +F +AR APCI+F DE+D+I RG D G RV++ LL EMDG+ EE + GV+V+ AT+R D+LD ALLRPGR V P+KE R + ++HTR +PLA VDLE L+ ++GG AD+EA CR+A M+A+RE+++ A +V H A+ +
Sbjct: 225 PKGVLLYGPPGTGKTLIAKAVANEI----GASFFTINGPEIMSKF-YGESE-----------QRLREIFEEAKENAPSIIFIDEIDSIAPKREEVTGEVER------RVVAQLLTLMDGLEERGQ--VIVIGATNRI-------------------------EAIDPALRRPGRFDREIEIGVPDRDGRYEILQIHTRNMPLEPDYSLEFILPALERLKKTLKENGDNRYRDIDFIIEEVRDLEKKEEIKKAIESWMPEDLKEEL------DREVIKAMLRYIADQTHGFVGADIEALCKEAAMKALRRILPE--------IDFNEEELPQEILENL---------------------KVTMDDFKESLKEIEPSAMREVLVEVPN----------------------VRWEDVGGLEDVKREIIEAVEWPLKYPEKFRKFGIKPPKGVLLYGPPGTGKTLIAKAVANESEANFISVKGSELLSKWLGESEKAVRKIFRKARQVAPCIIFFDEIDAIAPMRGLDEGSR---------AVERVVNQLLTEMDGL--------------------------------------EELD--------GVIVIGATNRPDILDPALLRPGRFDRLVYVRPPDKESRYAIFKIHTREMPLADDVDLEELAA--ITGGYVGADIEAICREAVMLALRENMN-AEKVEMRHFLEAIRK 770
BLAST of mRNA_H-paniculata_contig7938.15966.1 vs. uniprot
Match: A0A0A7GG99_GEOAI (Cell division protein FtsH n=1 Tax=Geoglobus acetivorans TaxID=565033 RepID=A0A0A7GG99_GEOAI) HSP 1 Score: 216 bits (549), Expect = 1.750e-54 Identity = 208/720 (28.89%), Postives = 310/720 (43.06%), Query Frame = 1
Query: 1270 PNNIIICGPSGVGKTLALDVLAEDVRERHGVHVIRVLGPEVLA---GLSHGGGRAIDSAAGLMAGSFLAQSLATARNRAPSILILDELDAVFDSMGEGVDAGSAALTEGARAGAALLAILDSASSTAGAGVAVVGATRYSFAEAGGAGWADQKESEGGEGIGWAGTAIPAAFRKPGRFDRCVEIGPPTQAGRERILRVLLDVPGWQLKPSRSGWRSSSA----KTSERWAQTDAEGLLPLESQDVTTRFPRGTADEEG--GGIPDDRETLREWARRLSSL--------TPGMLGGDLDRLVRTARAGAASRSRINSTSREPGAIDTRGENKNISSPLQSRSPACAAIASVRASCAAASKTNLSLTNGSLLLTWQDVMRAVAVTVPRSLKGMDIASSSHDASSGDSGGGPTWASVGGFSKSRRRLQRLVQWPWQHPEAFAKMGISAPAGALLYGPSGCGKSLVAQVLANECLANFVWVRSSELLSRYLGETEAKLRALFARARAAAPCILFLDELDSITAKRGDGGXXXXXXXXXXXVYARVLSTLLNEMDGVAGGGALQPKRLASVPVSDTNAVGSCAGSSSSSVGATCAEEGEAGADRAAGGVLVLAATSRRDMLDSALLRPGRLHESVEFGMPEKEDREEVLRVHTRRLPLAGGVDLERLSRDDVSGGLNCADLEASCRDAAMMAMREDLHGAPE-----------VRAEHLRSALEE 3345
P +++ GP G GKTL +A +V H I + GPE+++ G S L + A+ APSI+ +DE+D++ E R A LL ++D T G V V+GAT A+ A R+PGRFDR +EIG P + GR+ IL++ G ++P + A KT R+ + ++ R + +EE + +D E L E +L+ + T G +G DL L + A A A R RI E G ID E + A + + L +L MR V V VP +K W +GG K+++ L+ V+WP ++PE F GI P G LLYGP G GK+L+A+ +ANE ANF+ V+ ELLS+++GE+E +R +F +AR APC++F DE+DS+ +RG G V RV+S LL E+DG+ + D V+V+AAT+R DM+D ALLRPGR+ + P+ E R+E+ RVHTR +PL+ V +RL+ +++ G + AD+EA CR+A + A+RE + E V +H R A+E+
Sbjct: 212 PKGVLLYGPPGTGKTLMAKAVANEVD----AHFISLSGPEIMSKYYGESE---------------QRLREIFEEAKENAPSIIFIDEIDSIAPKREEVTGEVER------RVVAQLLTLMDGLE-TRGQ-VIVIGATNRP-------------------------DAVDPALRRPGRFDREIEIGVPDKEGRKEILQI--HTRGMPIEPRYTRRDVIGAFNELKTLGRFDSARIDSMIE--------RVEKTPENEEDILKVLREDEELLNEVKSKLTDVMFDYLAEKTNGFVGADLAALAKEA-AMHALRKRI-----ETGEIDVEAEE-------------------IPAEVLESLRVTLEDFEEALKNIEPSAMREVLVEVPN-IK---------------------WDDIGGLEKAKQELKEAVEWPMKYPELFITAGIKPPRGILLYGPPGTGKTLLAKAVANESNANFISVKGPELLSKWVGESEKHVREMFRKARQVAPCVIFFDEIDSLAPRRGGTGDSH--------VTERVVSQLLTELDGLE-------------ELKD---------------------------------VVVIAATNRPDMIDPALLRPGRIERHIYIPPPDIEARKEIFRVHTRDMPLSDDVSFDRLA--EMTDGYSGADIEAVCREAGLTAIREVVQKYSEEEIKEAVKQLKVTMDHFRKAIEK 766
BLAST of mRNA_H-paniculata_contig7938.15966.1 vs. uniprot
Match: A0A836CCE4_9STRA (Armadillo-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCE4_9STRA) HSP 1 Score: 221 bits (562), Expect = 2.090e-54 Identity = 187/500 (37.40%), Postives = 234/500 (46.80%), Query Frame = 1
Query: 2005 TADEEGGGIPDDRETLRE--WARRLSSLTPGMLGGDLDRLVRTARAGAASRSRINSTSREPGAIDTRGENKNISSPLQSRSPACAAIASVRASCAAASKTNLSLTNGSLLLTWQDVMRAVAVTVPRSLKGMDIASSSHDASSGDSGGGPTWASVGGFSKSRRRLQRLVQWPWQHPEAFAKMGISAPAGALLYGPSGCGKSLVAQVLANECLANFVWVRSSELLSRYLGETEAKLRALFARARAAAPCILFLDELDSITAKRGDGGXXXXXXXXXXXVYARVLSTLLNEMDGVAGGGALQPKRLASVPVSDTNAVGSCAGSSSSSVGATCAEEGEAGADRAAGGVLVLAATSRRDMLDSALLRPGRLHESVEFGMPEKEDREEVLRVHTRRLPL-------------------------------------------------AGGVDLERLSRDDVSGGLNCADLEASCRDAAMMAMREDLHGAPEVRAEHLRSALEERA 3351
TA GG D E E WA RL+ TPG GGD RL+R ARA A +R R + D + S +G L W D+ A+A P L+G++ S G W +VGG+ + RL RL +M +++ +GALL GPSGCGK+LVA LA EC ANF+ VRSS LLS Y GE+E +R LF RARAAAP ILFLDE+D++TA RG XXXXXXXX V R+LSTLLNEMDGV G AG D G VLVL AT+R + +DSALLRPGRLHE+V GMP+ +DR ++LR++T R+PL A L+ L+ D VSGG+ CA LEA+CR+AAMMA+RED+ V HL+ AL +A
Sbjct: 1359 TAYVNSGGDGGDSEEGAEARWAGRLADATPGFTGGDARRLLRAARAEAQARRHA----RGGASCDXXXXXXXXXXXXXXXXXXXSRRTS----------------DGDAELCWSDLEHALARVAPSELQGVE---GGVLPSGGRGXXXXXWGTVGGYQGVKERLARL------------RMSLTSVSGALLEGPSGCGKTLVAHALAGECRANFIAVRSSGLLSPYFGESEENVRRLFRRARAAAPSILFLDEIDALTAARG--ASXXXXXXXXDEVQLRLLSTLLNEMDGV----------------------------------------GHAGGD---GRVLVLGATNRPEAIDSALLRPGRLHEAVHIGMPDAQDRLDILRLYTSRMPLRSEGGDIFKVEVAXXXXXXXXXXXXXSPDHQAQIVAGXXXXXGKQPHAEAANAVLQELASDGVSGGMTCAGLEAACREAAMMALREDME-CTSVSIAHLKQALLAQA 1777 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7938.15966.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig7938.15966.1 >prot_H-paniculata_contig7938.15966.1 ID=prot_H-paniculata_contig7938.15966.1|Name=mRNA_H-paniculata_contig7938.15966.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1122bp MSREIRVRAFPALPGSSCCLENGDWPLDPHEILLNPRDLDKLRVPAYGYVback to top mRNA from alignment at H-paniculata_contig7938:2247..9156+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig7938.15966.1 ID=mRNA_H-paniculata_contig7938.15966.1|Name=mRNA_H-paniculata_contig7938.15966.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6910bp|location=Sequence derived from alignment at H-paniculata_contig7938:2247..9156+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig7938:2247..9156+ >mRNA_H-paniculata_contig7938.15966.1 ID=mRNA_H-paniculata_contig7938.15966.1|Name=mRNA_H-paniculata_contig7938.15966.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=6732bp|location=Sequence derived from alignment at H-paniculata_contig7938:2247..9156+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |