mRNA_H-paniculata_contig7895.15918.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig7895.15918.1 vs. uniprot
Match: D7FT36_ECTSI (Aspartyl protease family A01A, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT36_ECTSI) HSP 1 Score: 360 bits (925), Expect = 9.860e-121 Identity = 213/368 (57.88%), Postives = 244/368 (66.30%), Query Frame = 1
Query: 1 RRLGKVDVEDLLNFIFPLNLQHPLSTGRLYAFGMYGPLDEDGNLRAGHNGQRVVSGWELDTMCLQFEREDILQVYIPAERPLFVLSEAQKEEVVAQADSHLKTAKGRGYRRQVTRGEVVQLLSGLPRDKGSGLISFHDAQALITRYRDKQIARFKVIFPDLTSGGXXXXXXXXCGCECE-------------------------ALAKIQREGSARSPEMPGLVSKKTEQQQA-CPANKAGALKGXXXXXXXXXXXERRRAKFSPDVAPAEMFVKDAGLTPAGVAKYTNKLLSTRAYKVSNIEDGNNLGLTQNVIMIREDDDNRKRRLSLAGGLARGASWDSYACLRGNNIGAHVRSARSSTTAKRKA 1026
+R GKV+V++LL FIFP +LQHPLSTGRLYAF +YGPLD + LR+G+NGQRVVS WE+DTMCLQFEREDILQVYI RPLFVL++AQKEEV+AQADSHLKTAKGRGYRRQVTRGEVV LLS LPR SGL+SFHDAQ LI YR+KQIARFKVIFP++ +GG C ALA+ G A++ G V TE C KG RAKFS +VAPAEMFVKD G TPAG+A +T+KLLSTRAYKVSNI DGN+ GLTQNV +IR+D + + +WD YACLRG NIG HVRSARSSTTAKRKA
Sbjct: 12 KRDGKVNVQELLEFIFPKSLQHPLSTGRLYAFALYGPLDSNSELRSGYNGQRVVSTWEIDTMCLQFEREDILQVYISGGRPLFVLNDAQKEEVIAQADSHLKTAKGRGYRRQVTRGEVVDLLSTLPR-YASGLVSFHDAQKLIMGYREKQIARFKVIFPEI-AGGAASKQAGRASKSCAHGNIGGGGKTLDGDVGRGGGGDRSCALAETTVVGRAQA----GKVLASTENMSTGCSGGGGAKRKGG-------------RAKFSAEVAPAEMFVKDMGHTPAGIANHTSKLLSTRAYKVSNIADGNDPGLTQNVKLIRDDRQPEQGQ----------GTWDPYACLRGYNIGGHVRSARSSTTAKRKA 350
BLAST of mRNA_H-paniculata_contig7895.15918.1 vs. uniprot
Match: A0A7S3Y154_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y154_HETAK) HSP 1 Score: 219 bits (559), Expect = 1.970e-65 Identity = 148/340 (43.53%), Postives = 192/340 (56.47%), Query Frame = 1
Query: 13 KVDVEDLLNFIFPLNLQHPLSTGRLYAFGMYGPLDEDGNLRAGHNGQRVVSGWELDTMCLQFEREDILQVYIPAERPLFVLSEAQKEEVVAQADSHLKTAKGRGYRRQVTRGEVVQLLSGLPRDKGSGLISFHDAQALITRYRDKQIARFKVIFPDLTSGGXXXXXXXXCGCECEALAKIQREGSARSPEMPGLVSKKTEQQQACPANKAGALKGXXXXXXXXXXXERRRAKFSPDVAPAEMFVKDAGLTPAGVAKYTNKLLSTRAYKVSNIEDGNNLGLTQNVIM---IREDDDNRKRRLSLAGGLARGASWDSYACLRGNNIGAHVRSARSSTTAKRK 1023
+V +E L+ F+FP LQHPLSTGRL+AFG+YGPLDE+ LR+GH GQ +V +ELD MC +FERE ILQVY+ ++ +LSE++ E V+AQAD K AKG+ QV+R E L + LPRD G +SFHD Q I YR+++IA KVIFP+L XXXXXXXX VS E P + K ++ S VAP EMF K G T ++ N+LLS A+++++IE GN LTQNV + IRE DD RK WDS +CLRG+NIG HV++A+S+TT KRK
Sbjct: 41 QVSLESLMVFLFPPGLQHPLSTGRLFAFGLYGPLDENSQLRSGHKGQHIVQRFELDAMCQRFEREIILQVYLGSDS-FELLSESEVEAVIAQADRRTKVAKGKAGMPQVSREEAAALFADLPRD-ADGRLSFHDMQRKIVEYREQKIAELKVIFPELMGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPQQAAVSDAGE-----PGSXXXXFK--LMDAGRQAPVSAKKKGLSRRVAPPEMFQKGTGFTEMEMSSQVNQLLSKHAFRITDIEHGNASELTQNVQLLREIREPDDGRK--------------WDSNSCLRGSNIGGHVKTAKSATTVKRK 357
BLAST of mRNA_H-paniculata_contig7895.15918.1 vs. uniprot
Match: A0A7S2B712_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B712_9STRA) HSP 1 Score: 217 bits (553), Expect = 2.640e-65 Identity = 139/335 (41.49%), Postives = 179/335 (53.43%), Query Frame = 1
Query: 22 VEDLLNFIFPLNLQHPLSTGRLYAFGMYGPLDEDGNLRAGHNGQRVVSGWELDTMCLQFEREDILQVYIPAERPLFVLSEAQKEEVVAQADSHLKTAKGRGYRRQVTRGEVVQLLSGLPRDKGSGLISFHDAQALITRYRDKQIARFKVIFPDLTSGGXXXXXXXXCGCECEALAKIQREGSARS-PEMPGLVSKKTEQQQACPANKAGALKGXXXXXXXXXXXERRRAKFSPDVAPAEMFVKDAGLTPAGVAKYTNKLLSTRAYKVSNIEDGNNLGLTQNVIMIREDDDNRKRRLSLAGGLARGASWDSYACLRGNNIGAHVRSARSSTTAKRK 1023
+E + F+FP NLQHP+STGRL+AFG YGPLD D LR+GH GQ VV WELDTMC QFEREDILQ+Y+ + L+E Q EE++AQADS LK AKG+ +QVT EV + S L D +GL+ FHD Q I YR I K +FP++TS K +R GS +S PE + + P G R + VAPA MF++D GL VA TNKLL +A+ + NI DGN+ LT NV ++R + K G + +WD RG +GA V++ +SSTT KRK
Sbjct: 1 LEAVKRFVFPQNLQHPMSTGRLFAFGFYGPLDADARLRSGHKGQHVVGNWELDTMCRQFEREDILQIYMLPGQTHSNLTEDQAEEILAQADSRLKVAKGKAMMKQVTPEEVDMIFSDLEPDPATGLLQFHDCQQRIIEYRQYCIKLNKEVFPEVTS-------------------KAKRIGSLKSGPEFTPIGPLGATYNEFGPGRSTGR--------------RTRGVRVGASVAPATMFLRDKGLNSMEVASSTNKLLCHKAFSLCNIADGNSSELTANVRLVRSEP---KDSAYTPEGRS---TWDRNHATRGQLMGAFVKAPKSSTTVKRK 296
BLAST of mRNA_H-paniculata_contig7895.15918.1 vs. uniprot
Match: A0A835ZGK5_9STRA (Putative aspartyl protease family A01A n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGK5_9STRA) HSP 1 Score: 187 bits (474), Expect = 2.470e-53 Identity = 122/338 (36.09%), Postives = 171/338 (50.59%), Query Frame = 1
Query: 4 RLGKVDVEDLLNFIFPLNLQHPLSTGRLYAFGMYGPLDEDGNLRAGHNGQRVVSGWELDTMCLQFEREDILQVYIPAERPLFVLSEAQKEEVVAQADSHLKTAKGRGYRRQVTRGEVVQLLSGLPRDKGSGLISFHDAQALITRYRDKQIARFKVIFPDLTSGGXXXXXXXXCGCECEALAKIQREGSARSPEMPGLVSKKTEQQQACPANKAGALKGXXXXXXXXXXXERRRAKFSPDVAPAEMFVKDAGLTPAGVAKYT--------------------NKLLSTRAYKVSNIEDGNNLGLTQNVIMIREDDDNRKRRLSLAGGLARGASWDSYAC 957
+ +V ++DLL FIFP++LQHPLS+GRL FG YGP +G L +G G+ VV WELD+MC +RED+LQVY+ +RPL L AQ+EE++AQ+ Q+TR +V+ L G+PR + SFHD Q ++ YRD+++A K+++P L +A S P ++ TE+ A A + + + KFSPDVAPA MF+KD GL +A NKLLST+A+K+S+IEDGNN LT NV +IRED ++ + GA WD C
Sbjct: 24 KAARVFLDDLLKFIFPVHLQHPLSSGRLIVFGYYGP-PVNGQLHSGQRGEHVVGDWELDSMCTTIDREDVLQVYVSDDRPLCELLAAQQEEIIAQSTVTFP---------QITREQVIALFEGVPRGTDNAF-SFHDVQKVVVAYRDRRVADGKIMYPSL---------------------------AAHSKSPPRKRAQSTEKGTATAAQRQSPIS------------RGHKFKFSPDVAPATMFLKDKGLGDMEMATQRPLHSIQTINEVLLLTCMVQINKLLSTKAFKISSIEDGNNPSLTGNVRLIREDTTHQPQG---------GAQWDETCC 302
BLAST of mRNA_H-paniculata_contig7895.15918.1 vs. uniprot
Match: A0A7S4A522_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A522_9STRA) HSP 1 Score: 152 bits (385), Expect = 1.490e-39 Identity = 71/154 (46.10%), Postives = 104/154 (67.53%), Query Frame = 1
Query: 16 VDVEDLLNFIFPLNLQHPLSTGRLYAFGMYGPLDEDGNLRAGHNGQRVVSGWELDTMCLQFEREDILQVYIPAERPLFVLSEAQKEEVVAQADSHLKTAKGRGYRRQVTRGEVVQLLSGLPRDKGSGLISFHDAQALITRYRDKQIARFKVIFP 477
V ++DL++F+FP +L HPLSTGRLYAFG YGPLD LR+G GQ V+ WELD MC QFERED LQVY+ R L LSE Q+ E+++QAD+ +K+ +G+G Q+++ EV + G+ G + FH+ Q + +R+ +I + +V++P
Sbjct: 78 VSIDDLISFVFPADLYHPLSTGRLYAFGFYGPLDRQQQLRSGPKGQHVLGRWELDAMCHQFEREDCLQVYVSEGRALCTLSEEQQNELISQADARMKSKRGKGLMPQLSKDEVRDIFEGVETSP-DGTMRFHEMQQRVLAFREDRIKKMRVMYP 230
BLAST of mRNA_H-paniculata_contig7895.15918.1 vs. uniprot
Match: A0A7S2RFT5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RFT5_9STRA) HSP 1 Score: 142 bits (357), Expect = 1.780e-37 Identity = 75/141 (53.19%), Postives = 97/141 (68.79%), Query Frame = 1
Query: 70 LSTGRLYAFGMYGPLDEDGNLRAGHNGQRVVSGWELDTMCLQFEREDILQVYIPAERPLFVLSEAQKEEVVAQADSHLKTAKGRGYRRQVTRGEVVQLLSGLPRDKGSGLISFHDAQALITRYRDKQIARFKVIFPDLTSG 492
+STGRL AFG +GPLD LR+G+ GQ VVS WELDTMC QFEREDILQVY+ + L+E + E++AQAD+ +K AKG+ +QVT EV +L + L RD+ GL++FHD Q I ++R+ I KVIFP LT G
Sbjct: 1 MSTGRLLAFGFHGPLDHAARLRSGYLGQHVVSRWELDTMCRQFEREDILQVYMQKGQSPSALAEEEALELLAQADTRMKVAKGKALMKQVTEEEVRELFADLHRDE-DGLLTFHDMQQRIMQFRENAIKSNKVIFPHLTPG 140
BLAST of mRNA_H-paniculata_contig7895.15918.1 vs. uniprot
Match: A0A3R7K4N4_9STRA (NDK domain-containing protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7K4N4_9STRA) HSP 1 Score: 129 bits (324), Expect = 3.610e-30 Identity = 99/292 (33.90%), Postives = 137/292 (46.92%), Query Frame = 1
Query: 10 GKVDVEDLLNFIFPLNLQHPLSTGRLYAFGMYGPLDEDGNLRAGHNGQRVVSGWELDTMCLQFEREDILQVYIPAERPLFVLSEAQKEEVVAQADSHLKTAKGRGYRRQVTRGEVVQLLSGLPRDKGSGLISFHDAQALITRYRDKQIARFKV-IFPDLTSGGXXXXXXXXCGCECEALAKIQREGSARSPEMPGLVSKKTEQQQACPANKAGALKGXXXXXXXXXXXERRRAKFSPDVAPAEMFVKDAGLTPAGVAKYTNKLLSTRAYKVSNIEDGNNLGLTQNVIMIRED 882
G +D++ LLNF+FP +LQHP S GRL+ FG+YGPLD LR+G G VV+ EL TM + EREDIL VY + LS+ ++EEVV Q D LK Q T ++ L S L RD G ++FHD Q + + R +++ K + P AL + R AR+ + A KG AP+ F+KD G T A ++LLSTRA+++ +EDGN+ LTQNV ++R D
Sbjct: 209 GAMDLDQLLNFLFPKHLQHPNSAGRLFVFGLYGPLDSHSRLRSGERGLHVVTDRELTTMSTRIEREDILAVY-----SMCSLSQEEEEEVVRQVDRLLKCYP------QYTPRDIETLFSPLLRD-ADGNMNFHDMQRAVMKERLRRVVCMKERLHP--------------------ALGVLVRNQFART------------------LTRLTATKGDSLVNG----------------APSSFFLKDVGATDVENAALVSRLLSTRAFQICQMEDGNSPELTQNVRLVRPD 434
BLAST of mRNA_H-paniculata_contig7895.15918.1 vs. uniprot
Match: V9ENW6_PHYPR (NDK domain-containing protein n=8 Tax=Phytophthora TaxID=4783 RepID=V9ENW6_PHYPR) HSP 1 Score: 129 bits (324), Expect = 4.890e-30 Identity = 98/288 (34.03%), Postives = 142/288 (49.31%), Query Frame = 1
Query: 22 VEDLLNFIFPLNLQHPLSTGRLYAFGMYGPLDEDGNLRAGHNGQRVVSGWELDTMCLQFEREDILQVYIPAERPLFVLSEAQKEEVVAQADSHLKTAKGRGYRRQVTRGEVVQLLSGLPRDKGSGLISFHDAQALITRYRDKQIARFKV-IFPDLTSGGXXXXXXXXCGCECEALAKIQREGSARSPEMPGLVSKKTEQQQACPANKAGALKGXXXXXXXXXXXERRRAKFSPDVAPAEMFVKDAGLTPAGVAKYTNKLLSTRAYKVSNIEDGNNLGLTQNVIMIRED 882
++ LLNF+FP +LQHP S GRL+ FG+YGPLDE LR+G G +V+ EL TM + EREDIL VY + LS+ ++EEVV Q D LK Q T ++ L + LPRD G +SFHD Q + + R +++ K + P ALA+ R +R+ + + + K+ +G + G AP+ F+KD G T A ++LLSTRA+++ +EDGN+ LTQNV ++R D
Sbjct: 241 LDQLLNFLFPEHLQHPTSAGRLFVFGLYGPLDEYSRLRSGEKGLHIVTDRELTTMSARMEREDILAVY-----GMCSLSQEEEEEVVCQVDHLLKRFP------QYTPRDIETLFAPLPRDS-DGNMSFHDMQQAVLKERLRRVVCMKERLHP--------------------ALAEPVRNRFSRT--LTRVTATKS----------SGLVNG----------------------APSSFFLKDVGATNVENAALVSRLLSTRAFQICQMEDGNSPALTQNVRLVRFD 462
BLAST of mRNA_H-paniculata_contig7895.15918.1 vs. uniprot
Match: A0A6A3FAD1_9STRA (NDK domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3FAD1_9STRA) HSP 1 Score: 127 bits (319), Expect = 2.790e-29 Identity = 100/288 (34.72%), Postives = 140/288 (48.61%), Query Frame = 1
Query: 22 VEDLLNFIFPLNLQHPLSTGRLYAFGMYGPLDEDGNLRAGHNGQRVVSGWELDTMCLQFEREDILQVYIPAERPLFVLSEAQKEEVVAQADSHLKTAKGRGYRRQVTRGEVVQLLSGLPRDKGSGLISFHDAQALITRYRDKQIARFKV-IFPDLTSGGXXXXXXXXCGCECEALAKIQREGSARSPEMPGLVSKKTEQQQACPANKAGALKGXXXXXXXXXXXERRRAKFSPDVAPAEMFVKDAGLTPAGVAKYTNKLLSTRAYKVSNIEDGNNLGLTQNVIMIRED 882
++ LLNF+FP +LQHP S GRL+ FG+YGPLD LR+G G VV+ EL TM + EREDIL VY + LS+ ++EEVV Q D LK + Q T ++ L + L RD G +SFHD Q + + R +++ K + P ALA+ R AR+ + L +KK G + G AP+ F+KD G T A ++LLSTRA+++ +EDGN+ LTQNV ++R D
Sbjct: 254 LDQLLNFLFPEHLQHPNSAGRLFVFGLYGPLDAHSRLRSGEKGLHVVTDRELTTMSARMEREDILAVY-----GMCSLSQEEEEEVVRQVDYLLK------WFPQYTPRDIEALFAPLSRDS-DGSMSFHDMQRAVLKERLRRVVCMKERLHP--------------------ALAEPVRNQFARA--LTRLAAKKD----------GGLVNG----------------------APSSFFLKDVGATNVEDAALVSRLLSTRAFQICQMEDGNSPELTQNVRLLRPD 475
BLAST of mRNA_H-paniculata_contig7895.15918.1 vs. uniprot
Match: G5A5E0_PHYSP (Peptidase A1 domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5A5E0_PHYSP) HSP 1 Score: 128 bits (322), Expect = 4.290e-29 Identity = 101/285 (35.44%), Postives = 139/285 (48.77%), Query Frame = 1
Query: 31 LLNFIFPLNLQHPLSTGRLYAFGMYGPLDEDGNLRAGHNGQRVVSGWELDTMCLQFEREDILQVYIPAERPLFVLSEAQKEEVVAQADSHLKTAKGRGYRRQVTRGEVVQLLSGLPRDKGSGLISFHDAQALITRYRDKQIARFKV-IFPDLTSGGXXXXXXXXCGCECEALAKIQREGSARSPEMPGLVSKKTEQQQACPANKAGALKGXXXXXXXXXXXERRRAKFSPDVAPAEMFVKDAGLTPAGVAKYTNKLLSTRAYKVSNIEDGNNLGLTQNVIMIRED 882
LLNF+FP +LQHP S GRL+ FG+YGPLD LR+G G VV+ EL TM + EREDIL VY + LS+ ++EEVV Q D LK Q T ++ +L + LPRD G +SFHD Q + + R +++ K + P ALA+ R AR+ + L +KK G + G AP+ F+KD G T A ++LLSTRA+++ +EDGN+ LTQNV ++R D
Sbjct: 581 LLNFMFPEHLQHPNSAGRLFVFGLYGPLDAHSRLRSGEKGLHVVTDRELTTMSARMEREDILAVY-----GMCSLSQEEEEEVVRQVDHLLKKFP------QYTPRDIEKLFAPLPRDS-DGNMSFHDMQRAVLKERLRRVVCMKERLHP--------------------ALAEPVRNQFART--LTRLSAKKD----------GGLVNG----------------------APSSFFLKDVGATNVENAALVSRLLSTRAFQICQMEDGNSPELTQNVRLLRPD 799 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7895.15918.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig7895.15918.1 >prot_H-paniculata_contig7895.15918.1 ID=prot_H-paniculata_contig7895.15918.1|Name=mRNA_H-paniculata_contig7895.15918.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=343bp RRLGKVDVEDLLNFIFPLNLQHPLSTGRLYAFGMYGPLDEDGNLRAGHNGback to top mRNA from alignment at H-paniculata_contig7895:6095..9417+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig7895.15918.1 ID=mRNA_H-paniculata_contig7895.15918.1|Name=mRNA_H-paniculata_contig7895.15918.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3323bp|location=Sequence derived from alignment at H-paniculata_contig7895:6095..9417+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig7895:6095..9417+ >mRNA_H-paniculata_contig7895.15918.1 ID=mRNA_H-paniculata_contig7895.15918.1|Name=mRNA_H-paniculata_contig7895.15918.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2058bp|location=Sequence derived from alignment at H-paniculata_contig7895:6095..9417+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |