mRNA_H-paniculata_contig7895.15918.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig7895.15918.1
Unique NamemRNA_H-paniculata_contig7895.15918.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig7895.15918.1 vs. uniprot
Match: D7FT36_ECTSI (Aspartyl protease family A01A, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT36_ECTSI)

HSP 1 Score: 360 bits (925), Expect = 9.860e-121
Identity = 213/368 (57.88%), Postives = 244/368 (66.30%), Query Frame = 1
Query:    1 RRLGKVDVEDLLNFIFPLNLQHPLSTGRLYAFGMYGPLDEDGNLRAGHNGQRVVSGWELDTMCLQFEREDILQVYIPAERPLFVLSEAQKEEVVAQADSHLKTAKGRGYRRQVTRGEVVQLLSGLPRDKGSGLISFHDAQALITRYRDKQIARFKVIFPDLTSGGXXXXXXXXCGCECE-------------------------ALAKIQREGSARSPEMPGLVSKKTEQQQA-CPANKAGALKGXXXXXXXXXXXERRRAKFSPDVAPAEMFVKDAGLTPAGVAKYTNKLLSTRAYKVSNIEDGNNLGLTQNVIMIREDDDNRKRRLSLAGGLARGASWDSYACLRGNNIGAHVRSARSSTTAKRKA 1026
            +R GKV+V++LL FIFP +LQHPLSTGRLYAF +YGPLD +  LR+G+NGQRVVS WE+DTMCLQFEREDILQVYI   RPLFVL++AQKEEV+AQADSHLKTAKGRGYRRQVTRGEVV LLS LPR   SGL+SFHDAQ LI  YR+KQIARFKVIFP++ +GG            C                          ALA+    G A++    G V   TE     C        KG              RAKFS +VAPAEMFVKD G TPAG+A +T+KLLSTRAYKVSNI DGN+ GLTQNV +IR+D    + +           +WD YACLRG NIG HVRSARSSTTAKRKA
Sbjct:   12 KRDGKVNVQELLEFIFPKSLQHPLSTGRLYAFALYGPLDSNSELRSGYNGQRVVSTWEIDTMCLQFEREDILQVYISGGRPLFVLNDAQKEEVIAQADSHLKTAKGRGYRRQVTRGEVVDLLSTLPR-YASGLVSFHDAQKLIMGYREKQIARFKVIFPEI-AGGAASKQAGRASKSCAHGNIGGGGKTLDGDVGRGGGGDRSCALAETTVVGRAQA----GKVLASTENMSTGCSGGGGAKRKGG-------------RAKFSAEVAPAEMFVKDMGHTPAGIANHTSKLLSTRAYKVSNIADGNDPGLTQNVKLIRDDRQPEQGQ----------GTWDPYACLRGYNIGGHVRSARSSTTAKRKA 350          
BLAST of mRNA_H-paniculata_contig7895.15918.1 vs. uniprot
Match: A0A7S3Y154_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y154_HETAK)

HSP 1 Score: 219 bits (559), Expect = 1.970e-65
Identity = 148/340 (43.53%), Postives = 192/340 (56.47%), Query Frame = 1
Query:   13 KVDVEDLLNFIFPLNLQHPLSTGRLYAFGMYGPLDEDGNLRAGHNGQRVVSGWELDTMCLQFEREDILQVYIPAERPLFVLSEAQKEEVVAQADSHLKTAKGRGYRRQVTRGEVVQLLSGLPRDKGSGLISFHDAQALITRYRDKQIARFKVIFPDLTSGGXXXXXXXXCGCECEALAKIQREGSARSPEMPGLVSKKTEQQQACPANKAGALKGXXXXXXXXXXXERRRAKFSPDVAPAEMFVKDAGLTPAGVAKYTNKLLSTRAYKVSNIEDGNNLGLTQNVIM---IREDDDNRKRRLSLAGGLARGASWDSYACLRGNNIGAHVRSARSSTTAKRK 1023
            +V +E L+ F+FP  LQHPLSTGRL+AFG+YGPLDE+  LR+GH GQ +V  +ELD MC +FERE ILQVY+ ++    +LSE++ E V+AQAD   K AKG+    QV+R E   L + LPRD   G +SFHD Q  I  YR+++IA  KVIFP+L    XXXXXXXX                         VS   E     P +     K              ++   S  VAP EMF K  G T   ++   N+LLS  A+++++IE GN   LTQNV +   IRE DD RK              WDS +CLRG+NIG HV++A+S+TT KRK
Sbjct:   41 QVSLESLMVFLFPPGLQHPLSTGRLFAFGLYGPLDENSQLRSGHKGQHIVQRFELDAMCQRFEREIILQVYLGSDS-FELLSESEVEAVIAQADRRTKVAKGKAGMPQVSREEAAALFADLPRD-ADGRLSFHDMQRKIVEYREQKIAELKVIFPELMGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPQQAAVSDAGE-----PGSXXXXFK--LMDAGRQAPVSAKKKGLSRRVAPPEMFQKGTGFTEMEMSSQVNQLLSKHAFRITDIEHGNASELTQNVQLLREIREPDDGRK--------------WDSNSCLRGSNIGGHVKTAKSATTVKRK 357          
BLAST of mRNA_H-paniculata_contig7895.15918.1 vs. uniprot
Match: A0A7S2B712_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B712_9STRA)

HSP 1 Score: 217 bits (553), Expect = 2.640e-65
Identity = 139/335 (41.49%), Postives = 179/335 (53.43%), Query Frame = 1
Query:   22 VEDLLNFIFPLNLQHPLSTGRLYAFGMYGPLDEDGNLRAGHNGQRVVSGWELDTMCLQFEREDILQVYIPAERPLFVLSEAQKEEVVAQADSHLKTAKGRGYRRQVTRGEVVQLLSGLPRDKGSGLISFHDAQALITRYRDKQIARFKVIFPDLTSGGXXXXXXXXCGCECEALAKIQREGSARS-PEMPGLVSKKTEQQQACPANKAGALKGXXXXXXXXXXXERRRAKFSPDVAPAEMFVKDAGLTPAGVAKYTNKLLSTRAYKVSNIEDGNNLGLTQNVIMIREDDDNRKRRLSLAGGLARGASWDSYACLRGNNIGAHVRSARSSTTAKRK 1023
            +E +  F+FP NLQHP+STGRL+AFG YGPLD D  LR+GH GQ VV  WELDTMC QFEREDILQ+Y+   +    L+E Q EE++AQADS LK AKG+   +QVT  EV  + S L  D  +GL+ FHD Q  I  YR   I   K +FP++TS                   K +R GS +S PE   +        +  P    G                 R  +    VAPA MF++D GL    VA  TNKLL  +A+ + NI DGN+  LT NV ++R +    K       G +   +WD     RG  +GA V++ +SSTT KRK
Sbjct:    1 LEAVKRFVFPQNLQHPMSTGRLFAFGFYGPLDADARLRSGHKGQHVVGNWELDTMCRQFEREDILQIYMLPGQTHSNLTEDQAEEILAQADSRLKVAKGKAMMKQVTPEEVDMIFSDLEPDPATGLLQFHDCQQRIIEYRQYCIKLNKEVFPEVTS-------------------KAKRIGSLKSGPEFTPIGPLGATYNEFGPGRSTGR--------------RTRGVRVGASVAPATMFLRDKGLNSMEVASSTNKLLCHKAFSLCNIADGNSSELTANVRLVRSEP---KDSAYTPEGRS---TWDRNHATRGQLMGAFVKAPKSSTTVKRK 296          
BLAST of mRNA_H-paniculata_contig7895.15918.1 vs. uniprot
Match: A0A835ZGK5_9STRA (Putative aspartyl protease family A01A n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGK5_9STRA)

HSP 1 Score: 187 bits (474), Expect = 2.470e-53
Identity = 122/338 (36.09%), Postives = 171/338 (50.59%), Query Frame = 1
Query:    4 RLGKVDVEDLLNFIFPLNLQHPLSTGRLYAFGMYGPLDEDGNLRAGHNGQRVVSGWELDTMCLQFEREDILQVYIPAERPLFVLSEAQKEEVVAQADSHLKTAKGRGYRRQVTRGEVVQLLSGLPRDKGSGLISFHDAQALITRYRDKQIARFKVIFPDLTSGGXXXXXXXXCGCECEALAKIQREGSARSPEMPGLVSKKTEQQQACPANKAGALKGXXXXXXXXXXXERRRAKFSPDVAPAEMFVKDAGLTPAGVAKYT--------------------NKLLSTRAYKVSNIEDGNNLGLTQNVIMIREDDDNRKRRLSLAGGLARGASWDSYAC 957
            +  +V ++DLL FIFP++LQHPLS+GRL  FG YGP   +G L +G  G+ VV  WELD+MC   +RED+LQVY+  +RPL  L  AQ+EE++AQ+              Q+TR +V+ L  G+PR   +   SFHD Q ++  YRD+++A  K+++P L                           +A S   P   ++ TE+  A  A +   +                + KFSPDVAPA MF+KD GL    +A                       NKLLST+A+K+S+IEDGNN  LT NV +IRED  ++ +          GA WD   C
Sbjct:   24 KAARVFLDDLLKFIFPVHLQHPLSSGRLIVFGYYGP-PVNGQLHSGQRGEHVVGDWELDSMCTTIDREDVLQVYVSDDRPLCELLAAQQEEIIAQSTVTFP---------QITREQVIALFEGVPRGTDNAF-SFHDVQKVVVAYRDRRVADGKIMYPSL---------------------------AAHSKSPPRKRAQSTEKGTATAAQRQSPIS------------RGHKFKFSPDVAPATMFLKDKGLGDMEMATQRPLHSIQTINEVLLLTCMVQINKLLSTKAFKISSIEDGNNPSLTGNVRLIREDTTHQPQG---------GAQWDETCC 302          
BLAST of mRNA_H-paniculata_contig7895.15918.1 vs. uniprot
Match: A0A7S4A522_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A522_9STRA)

HSP 1 Score: 152 bits (385), Expect = 1.490e-39
Identity = 71/154 (46.10%), Postives = 104/154 (67.53%), Query Frame = 1
Query:   16 VDVEDLLNFIFPLNLQHPLSTGRLYAFGMYGPLDEDGNLRAGHNGQRVVSGWELDTMCLQFEREDILQVYIPAERPLFVLSEAQKEEVVAQADSHLKTAKGRGYRRQVTRGEVVQLLSGLPRDKGSGLISFHDAQALITRYRDKQIARFKVIFP 477
            V ++DL++F+FP +L HPLSTGRLYAFG YGPLD    LR+G  GQ V+  WELD MC QFERED LQVY+   R L  LSE Q+ E+++QAD+ +K+ +G+G   Q+++ EV  +  G+      G + FH+ Q  +  +R+ +I + +V++P
Sbjct:   78 VSIDDLISFVFPADLYHPLSTGRLYAFGFYGPLDRQQQLRSGPKGQHVLGRWELDAMCHQFEREDCLQVYVSEGRALCTLSEEQQNELISQADARMKSKRGKGLMPQLSKDEVRDIFEGVETSP-DGTMRFHEMQQRVLAFREDRIKKMRVMYP 230          
BLAST of mRNA_H-paniculata_contig7895.15918.1 vs. uniprot
Match: A0A7S2RFT5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RFT5_9STRA)

HSP 1 Score: 142 bits (357), Expect = 1.780e-37
Identity = 75/141 (53.19%), Postives = 97/141 (68.79%), Query Frame = 1
Query:   70 LSTGRLYAFGMYGPLDEDGNLRAGHNGQRVVSGWELDTMCLQFEREDILQVYIPAERPLFVLSEAQKEEVVAQADSHLKTAKGRGYRRQVTRGEVVQLLSGLPRDKGSGLISFHDAQALITRYRDKQIARFKVIFPDLTSG 492
            +STGRL AFG +GPLD    LR+G+ GQ VVS WELDTMC QFEREDILQVY+   +    L+E +  E++AQAD+ +K AKG+   +QVT  EV +L + L RD+  GL++FHD Q  I ++R+  I   KVIFP LT G
Sbjct:    1 MSTGRLLAFGFHGPLDHAARLRSGYLGQHVVSRWELDTMCRQFEREDILQVYMQKGQSPSALAEEEALELLAQADTRMKVAKGKALMKQVTEEEVRELFADLHRDE-DGLLTFHDMQQRIMQFRENAIKSNKVIFPHLTPG 140          
BLAST of mRNA_H-paniculata_contig7895.15918.1 vs. uniprot
Match: A0A3R7K4N4_9STRA (NDK domain-containing protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7K4N4_9STRA)

HSP 1 Score: 129 bits (324), Expect = 3.610e-30
Identity = 99/292 (33.90%), Postives = 137/292 (46.92%), Query Frame = 1
Query:   10 GKVDVEDLLNFIFPLNLQHPLSTGRLYAFGMYGPLDEDGNLRAGHNGQRVVSGWELDTMCLQFEREDILQVYIPAERPLFVLSEAQKEEVVAQADSHLKTAKGRGYRRQVTRGEVVQLLSGLPRDKGSGLISFHDAQALITRYRDKQIARFKV-IFPDLTSGGXXXXXXXXCGCECEALAKIQREGSARSPEMPGLVSKKTEQQQACPANKAGALKGXXXXXXXXXXXERRRAKFSPDVAPAEMFVKDAGLTPAGVAKYTNKLLSTRAYKVSNIEDGNNLGLTQNVIMIRED 882
            G +D++ LLNF+FP +LQHP S GRL+ FG+YGPLD    LR+G  G  VV+  EL TM  + EREDIL VY      +  LS+ ++EEVV Q D  LK         Q T  ++  L S L RD   G ++FHD Q  + + R +++   K  + P                    AL  + R   AR+                    +  A KG                      AP+  F+KD G T    A   ++LLSTRA+++  +EDGN+  LTQNV ++R D
Sbjct:  209 GAMDLDQLLNFLFPKHLQHPNSAGRLFVFGLYGPLDSHSRLRSGERGLHVVTDRELTTMSTRIEREDILAVY-----SMCSLSQEEEEEVVRQVDRLLKCYP------QYTPRDIETLFSPLLRD-ADGNMNFHDMQRAVMKERLRRVVCMKERLHP--------------------ALGVLVRNQFART------------------LTRLTATKGDSLVNG----------------APSSFFLKDVGATDVENAALVSRLLSTRAFQICQMEDGNSPELTQNVRLVRPD 434          
BLAST of mRNA_H-paniculata_contig7895.15918.1 vs. uniprot
Match: V9ENW6_PHYPR (NDK domain-containing protein n=8 Tax=Phytophthora TaxID=4783 RepID=V9ENW6_PHYPR)

HSP 1 Score: 129 bits (324), Expect = 4.890e-30
Identity = 98/288 (34.03%), Postives = 142/288 (49.31%), Query Frame = 1
Query:   22 VEDLLNFIFPLNLQHPLSTGRLYAFGMYGPLDEDGNLRAGHNGQRVVSGWELDTMCLQFEREDILQVYIPAERPLFVLSEAQKEEVVAQADSHLKTAKGRGYRRQVTRGEVVQLLSGLPRDKGSGLISFHDAQALITRYRDKQIARFKV-IFPDLTSGGXXXXXXXXCGCECEALAKIQREGSARSPEMPGLVSKKTEQQQACPANKAGALKGXXXXXXXXXXXERRRAKFSPDVAPAEMFVKDAGLTPAGVAKYTNKLLSTRAYKVSNIEDGNNLGLTQNVIMIRED 882
            ++ LLNF+FP +LQHP S GRL+ FG+YGPLDE   LR+G  G  +V+  EL TM  + EREDIL VY      +  LS+ ++EEVV Q D  LK         Q T  ++  L + LPRD   G +SFHD Q  + + R +++   K  + P                    ALA+  R   +R+  +  + + K+          +G + G                      AP+  F+KD G T    A   ++LLSTRA+++  +EDGN+  LTQNV ++R D
Sbjct:  241 LDQLLNFLFPEHLQHPTSAGRLFVFGLYGPLDEYSRLRSGEKGLHIVTDRELTTMSARMEREDILAVY-----GMCSLSQEEEEEVVCQVDHLLKRFP------QYTPRDIETLFAPLPRDS-DGNMSFHDMQQAVLKERLRRVVCMKERLHP--------------------ALAEPVRNRFSRT--LTRVTATKS----------SGLVNG----------------------APSSFFLKDVGATNVENAALVSRLLSTRAFQICQMEDGNSPALTQNVRLVRFD 462          
BLAST of mRNA_H-paniculata_contig7895.15918.1 vs. uniprot
Match: A0A6A3FAD1_9STRA (NDK domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3FAD1_9STRA)

HSP 1 Score: 127 bits (319), Expect = 2.790e-29
Identity = 100/288 (34.72%), Postives = 140/288 (48.61%), Query Frame = 1
Query:   22 VEDLLNFIFPLNLQHPLSTGRLYAFGMYGPLDEDGNLRAGHNGQRVVSGWELDTMCLQFEREDILQVYIPAERPLFVLSEAQKEEVVAQADSHLKTAKGRGYRRQVTRGEVVQLLSGLPRDKGSGLISFHDAQALITRYRDKQIARFKV-IFPDLTSGGXXXXXXXXCGCECEALAKIQREGSARSPEMPGLVSKKTEQQQACPANKAGALKGXXXXXXXXXXXERRRAKFSPDVAPAEMFVKDAGLTPAGVAKYTNKLLSTRAYKVSNIEDGNNLGLTQNVIMIRED 882
            ++ LLNF+FP +LQHP S GRL+ FG+YGPLD    LR+G  G  VV+  EL TM  + EREDIL VY      +  LS+ ++EEVV Q D  LK      +  Q T  ++  L + L RD   G +SFHD Q  + + R +++   K  + P                    ALA+  R   AR+  +  L +KK            G + G                      AP+  F+KD G T    A   ++LLSTRA+++  +EDGN+  LTQNV ++R D
Sbjct:  254 LDQLLNFLFPEHLQHPNSAGRLFVFGLYGPLDAHSRLRSGEKGLHVVTDRELTTMSARMEREDILAVY-----GMCSLSQEEEEEVVRQVDYLLK------WFPQYTPRDIEALFAPLSRDS-DGSMSFHDMQRAVLKERLRRVVCMKERLHP--------------------ALAEPVRNQFARA--LTRLAAKKD----------GGLVNG----------------------APSSFFLKDVGATNVEDAALVSRLLSTRAFQICQMEDGNSPELTQNVRLLRPD 475          
BLAST of mRNA_H-paniculata_contig7895.15918.1 vs. uniprot
Match: G5A5E0_PHYSP (Peptidase A1 domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5A5E0_PHYSP)

HSP 1 Score: 128 bits (322), Expect = 4.290e-29
Identity = 101/285 (35.44%), Postives = 139/285 (48.77%), Query Frame = 1
Query:   31 LLNFIFPLNLQHPLSTGRLYAFGMYGPLDEDGNLRAGHNGQRVVSGWELDTMCLQFEREDILQVYIPAERPLFVLSEAQKEEVVAQADSHLKTAKGRGYRRQVTRGEVVQLLSGLPRDKGSGLISFHDAQALITRYRDKQIARFKV-IFPDLTSGGXXXXXXXXCGCECEALAKIQREGSARSPEMPGLVSKKTEQQQACPANKAGALKGXXXXXXXXXXXERRRAKFSPDVAPAEMFVKDAGLTPAGVAKYTNKLLSTRAYKVSNIEDGNNLGLTQNVIMIRED 882
            LLNF+FP +LQHP S GRL+ FG+YGPLD    LR+G  G  VV+  EL TM  + EREDIL VY      +  LS+ ++EEVV Q D  LK         Q T  ++ +L + LPRD   G +SFHD Q  + + R +++   K  + P                    ALA+  R   AR+  +  L +KK            G + G                      AP+  F+KD G T    A   ++LLSTRA+++  +EDGN+  LTQNV ++R D
Sbjct:  581 LLNFMFPEHLQHPNSAGRLFVFGLYGPLDAHSRLRSGEKGLHVVTDRELTTMSARMEREDILAVY-----GMCSLSQEEEEEVVRQVDHLLKKFP------QYTPRDIEKLFAPLPRDS-DGNMSFHDMQRAVLKERLRRVVCMKERLHP--------------------ALAEPVRNQFART--LTRLSAKKD----------GGLVNG----------------------APSSFFLKDVGATNVENAALVSRLLSTRAFQICQMEDGNSPELTQNVRLLRPD 799          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7895.15918.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FT36_ECTSI9.860e-12157.88Aspartyl protease family A01A, putative n=1 Tax=Ec... [more]
A0A7S3Y154_HETAK1.970e-6543.53Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2B712_9STRA2.640e-6541.49Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A835ZGK5_9STRA2.470e-5336.09Putative aspartyl protease family A01A n=1 Tax=Tri... [more]
A0A7S4A522_9STRA1.490e-3946.10Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2RFT5_9STRA1.780e-3753.19Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A3R7K4N4_9STRA3.610e-3033.90NDK domain-containing protein n=1 Tax=Phytophthora... [more]
V9ENW6_PHYPR4.890e-3034.03NDK domain-containing protein n=8 Tax=Phytophthora... [more]
A0A6A3FAD1_9STRA2.790e-2934.72NDK domain-containing protein n=5 Tax=Phytophthora... [more]
G5A5E0_PHYSP4.290e-2935.44Peptidase A1 domain-containing protein n=1 Tax=Phy... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7895contigH-paniculata_contig7895:6095..9417 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score367.5
Seed ortholog evalue6.9e-99
Seed eggNOG ortholog2880.D7FT36
Hectar predicted targeting categoryother localisation
EggNOG OGs2CN2N@1,2QTJA@2759
Ec32 ortholog descriptionaspartyl protease family A01A, putative
Ec32 orthologEc-04_002690.1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons3
Model size1029
Cds size1029
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7895.15918.1prot_H-paniculata_contig7895.15918.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig7895 6095..9417 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930982.1955714-CDS-H-paniculata_contig7895:6094..63131622930982.1955714-CDS-H-paniculata_contig7895:6094..6313Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7895 6095..6313 +
1691481537.6267169-CDS-H-paniculata_contig7895:6094..63131691481537.6267169-CDS-H-paniculata_contig7895:6094..6313Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7895 6095..6313 +
1622930982.2229204-CDS-H-paniculata_contig7895:7233..77971622930982.2229204-CDS-H-paniculata_contig7895:7233..7797Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7895 7234..7797 +
1691481537.638879-CDS-H-paniculata_contig7895:7233..77971691481537.638879-CDS-H-paniculata_contig7895:7233..7797Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7895 7234..7797 +
1622930982.236843-CDS-H-paniculata_contig7895:9171..94171622930982.236843-CDS-H-paniculata_contig7895:9171..9417Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7895 9172..9417 +
1691481537.648232-CDS-H-paniculata_contig7895:9171..94171691481537.648232-CDS-H-paniculata_contig7895:9171..9417Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7895 9172..9417 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig7895.15918.1

>prot_H-paniculata_contig7895.15918.1 ID=prot_H-paniculata_contig7895.15918.1|Name=mRNA_H-paniculata_contig7895.15918.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=343bp
RRLGKVDVEDLLNFIFPLNLQHPLSTGRLYAFGMYGPLDEDGNLRAGHNG
QRVVSGWELDTMCLQFEREDILQVYIPAERPLFVLSEAQKEEVVAQADSH
LKTAKGRGYRRQVTRGEVVQLLSGLPRDKGSGLISFHDAQALITRYRDKQ
IARFKVIFPDLTSGGGGGGGDDECGCECEALAKIQREGSARSPEMPGLVS
KKTEQQQACPANKAGALKGGSGGGGGRRRGERRRAKFSPDVAPAEMFVKD
AGLTPAGVAKYTNKLLSTRAYKVSNIEDGNNLGLTQNVIMIREDDDNRKR
RLSLAGGLARGASWDSYACLRGNNIGAHVRSARSSTTAKRKA*
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mRNA from alignment at H-paniculata_contig7895:6095..9417+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig7895.15918.1 ID=mRNA_H-paniculata_contig7895.15918.1|Name=mRNA_H-paniculata_contig7895.15918.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3323bp|location=Sequence derived from alignment at H-paniculata_contig7895:6095..9417+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGACGCTTGGGGAAGGTGGATGTCGAAGACCTGCTGAACTTTATTTTCCC GCTGAATCTTCAACACCCTCTCTCCACTGGAAGGCTGTACGCTTTCGGCA TGTACGGTCCACTAGACGAGGACGGAAATCTCCGGGCTGGACATAACGGC CAAAGAGTAGTGAGCGGATGGGAACTTGACACAATGTGTCTTCAATTCGA GCGCGAGGATATTTTGCAGGTTGGCGGATATGTGGATGGAATACACCTGC GTTTAGTATGTTCTTTCGGTTCCATGAACAATGAAATAATCGAGAGTTTG TCGTGGGGTTTTATTATTTGTGATATACAAATCCATTTTAGCTTCCCCTA GAAAGGCCCCATGAGATCCAAACCATCTACTGATTTAGGTCCTGCGTCTA TCTCCGACACTCAGAGCAGTGGAGACACAGCTGGCTGCACCACCCCAGTG GCCTAAAACAATATTTTGGGTGGCTTGGAGAGCCCCTGAATTGAAAAATA TGACAATAGATGCTTGTGTACAGCAGCTTTAAGGCTCAGCGCTGAGAAAT AAAACGTTCGCTCGACCAAACGTTTCCTATGCTATTTTGACGTTTTGTCG CATCTCATACCCCTGAGAGTTGATGGCGGCAGATAATTCGAGTACAAAAA GTGCTTTTGGGGAACATCTCTCTGGCCTGAGAACGACCTAGCCCGCACAA AACAAACCAAATCCTCTGTTCTAATGGCCAAAAAACACCAAAGGAGTATA TTTTAGTGGTAAAAAAAGACAAAGCCATCTATTTTAGCTTATGAAAAGAG TAGAATCCTCTATTTTGTGCCCACAATGTCCAAAATCTTCAGTTTTGTGG GACAATTAAATTCCCCCCCCCCCTAGTTTCAGAGGTCTAAAACATTCACT TTCGTTTCTCATAGTCCGGACCCCTGTCAATTGAAATGGCTCTATAGGCA ATACGAAGTAATAAACAACACAGCGAAATTAGCTTGCAACACTGCACGAA CCAAACGGTCACCTTTGCACGTTTTTGCGTTTTACGTGATACGATCCATG AAGTAGTATCAGGTGCTAGATGATCGTAAACAACCGCTATTCACGAACAG ACACGCCGCCGTCACATTGACTGCCTAACGATTAGTCAGGTGTACATCCC GGCGGAGAGACCACTGTTCGTGTTAAGCGAAGCACAGAAAGAAGAGGTTG TGGCCCAGGCTGACAGCCACCTCAAGACGGCCAAAGGCCGGGGCTACCGA CGACAGGTCACCCGGGGCGAAGTCGTCCAGCTCCTCTCGGGCTTGCCTCG CGACAAAGGTTCAGGTCTCATCAGCTTTCACGATGCGCAGGCACTCATCA CCAGGTACCGAGATAAACAAATCGCTCGGTTCAAGGTTATCTTCCCTGAT CTTACTAGCGGCGGCGGCGGCGGCGGCGGCGATGATGAGTGCGGGTGTGA GTGTGAAGCGCTGGCCAAGATACAGCGGGAGGGGTCTGCTAGGTCCCCGG AAATGCCGGGTTTGGTGTCAAAAAAAACGGAGCAACAACAAGCTTGTCCA GCGAACAAGGCGGGAGCGTTGAAAGGGGGCAGCGGAGGAGGGGGAGGCAG AAGAAGAGGAGAAAGAAGGAGAGCCAAATTTAGCCCCGATGTGGCTCCCG CAGAGATGTTTGTGAAGGACGCCGGGCTTACGCCCGCTGGTGTGGCGAAG TATGTGAGTCCTGCGAAAGGATCTTGGACTTTCGTTATAATTGGAAACAG GATACAAGCAAAAATGCATTTGATGGGCTCGAGAGCAGTCTATCGCCTTT ATTCGCCAGAAACACCCAAATTTGAGTGTACAAAAATGGGGAAAAAACGC TCGCTAGGCTGGGCTTTCGAGAGAGAGGCGAGGGAGGGCAGAGAATCTTT ACCTTATGTAACTAGCAAGCGGTATCTTATAATGCACACCAAACCAGCTG GACTGTTGTTCTGATTATCCTAATAAACGGAGCCGAAAGACAAAACAACA ACAGCAGCGGGGTGTACCTTTTGAAACGACTTTGGTTCGAGTTTTTTATA TTCATCAGACGTCAACTCAACAGTGGTGTATCGAGTACATTTATGCAAGC ACAGCGGACGGAGTGGTCGCAACTGTCGCTGAAAAATAAAAACAAGTCCA TCAAGGGGGCGGGGGCGGGTATTGTGAACCGTTTGCCACAAATCCAAATA CTCTCTGAAGTCCGATATGTGTACCGTTGGCAACATCCACCCGCGCGGCC TTAAAGATGTACAACGCAGCTTCAAGACGAAATGATTGCGAGATGCTGAT GAAATACTCTGGATTCAGAGGATATGGATCTATCACAAACGGCCAACAAT GCCCTGCTCCCATCTCTATTTGTTTTAGTGTTTCTTTAACGGACGGGTAC GTGCTTGTGACCACACTGTCGGCGCAACGGCTGGGCGCAACCATCGGAGA TTTAGGTCACAAAACAACAGATATTTTCGTCGTGTCGGTCTAAAAATCCA GTCGTTGAAAAAATATTCTGTTAGTTTTATGTTAGTGTGTTTGTTCTCTG TTTGTGTCACATTGCGCGCGCTCTCTCTCTCTCTGTCGCAAATTCCTCCC TCTTCCCCATGATGATTTTCATTTTCTAATGACTACATATAGATACCAGT TTGGGCTAGTGATACATGATAACGTCAGCACGAGATAAATGAACGTGTCC TAAAACTACTGTTGTAAATTTATTCGGGAAAAAAACTCGTGAAGCGGGTT AATTGGTCAGTTTGTTCAGGACTTGCTCCCAAGTATGGCGTGTTCTGTGC GTAGTTTTAGCCGTATTTGTGTCGATGTTCCCATTACTGCTGCACATCAC GCTATTATTATATCTATGCGCGTCGCATCACACCCATACACTGACTGCTA GTGACACTGTTATCATATCCACCCCCCCCCCCCTCCGCGCGCGCGCGCCC CCGCCCCTCGCTCACATCAGCTTCTTAAAAACCACCTCTCCCTCTACGTG TTGCTGTTTTTCTATCACACGTCGCCATCGGTCACAAATTGATTACCGTT AATTGTTTTCCCACACGGACACACCAGACAAACAAGCTTCTGAGTACCCG CGCGTACAAGGTCAGCAATATCGAAGACGGGAACAATCTTGGCCTTACGC AGAACGTCATCATGATCCGAGAGGACGATGACAACAGGAAGAGGCGTTTA TCCCTCGCAGGCGGCCTGGCGCGTGGCGCGTCATGGGATTCTTACGCTTG TTTGAGAGGGAACAATATCGGCGCGCATGTTCGGTCGGCCAGGAGTTCTA CCACGGCAAAACGGAAAGCGTAA
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Coding sequence (CDS) from alignment at H-paniculata_contig7895:6095..9417+

>mRNA_H-paniculata_contig7895.15918.1 ID=mRNA_H-paniculata_contig7895.15918.1|Name=mRNA_H-paniculata_contig7895.15918.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2058bp|location=Sequence derived from alignment at H-paniculata_contig7895:6095..9417+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGACGCTTGGGGAAGGTGGATGTCGAAGACCTGCTGAACTTTATTTTCCC
GCTGAATCTTCAACACCCTCTCTCCACTGGAAGGCTGTACGCTTTCGGCA
TGTACGGTCCACTAGACGAGGACGGAAATCTCCGGGCTGGACATAACGGC
CAAAGAGTAGTGAGCGGATGGGAACTTGACACAATGTGTCTTCAATTCGA
GCGCGAGGATATTTTGCAGAGACGCTTGGGGAAGGTGGATGTCGAAGACC
TGCTGAACTTTATTTTCCCGCTGAATCTTCAACACCCTCTCTCCACTGGA
AGGCTGTACGCTTTCGGCATGTACGGTCCACTAGACGAGGACGGAAATCT
CCGGGCTGGACATAACGGCCAAAGAGTAGTGAGCGGATGGGAACTTGACA
CAATGTGTCTTCAATTCGAGCGCGAGGATATTTTGCAGGTGTACATCCCG
GCGGAGAGACCACTGTTCGTGTTAAGCGAAGCACAGAAAGAAGAGGTTGT
GGCCCAGGCTGACAGCCACCTCAAGACGGCCAAAGGCCGGGGCTACCGAC
GACAGGTCACCCGGGGCGAAGTCGTCCAGCTCCTCTCGGGCTTGCCTCGC
GACAAAGGTTCAGGTCTCATCAGCTTTCACGATGCGCAGGCACTCATCAC
CAGGTACCGAGATAAACAAATCGCTCGGTTCAAGGTTATCTTCCCTGATC
TTACTAGCGGCGGCGGCGGCGGCGGCGGCGATGATGAGTGCGGGTGTGAG
TGTGAAGCGCTGGCCAAGATACAGCGGGAGGGGTCTGCTAGGTCCCCGGA
AATGCCGGGTTTGGTGTCAAAAAAAACGGAGCAACAACAAGCTTGTCCAG
CGAACAAGGCGGGAGCGTTGAAAGGGGGCAGCGGAGGAGGGGGAGGCAGA
AGAAGAGGAGAAAGAAGGAGAGCCAAATTTAGCCCCGATGTGGCTCCCGC
AGAGATGTTTGTGAAGGACGCCGGGCTTACGCCCGCTGGTGTGGCGAAGT
ATGTGTACATCCCGGCGGAGAGACCACTGTTCGTGTTAAGCGAAGCACAG
AAAGAAGAGGTTGTGGCCCAGGCTGACAGCCACCTCAAGACGGCCAAAGG
CCGGGGCTACCGACGACAGGTCACCCGGGGCGAAGTCGTCCAGCTCCTCT
CGGGCTTGCCTCGCGACAAAGGTTCAGGTCTCATCAGCTTTCACGATGCG
CAGGCACTCATCACCAGGTACCGAGATAAACAAATCGCTCGGTTCAAGGT
TATCTTCCCTGATCTTACTAGCGGCGGCGGCGGCGGCGGCGGCGATGATG
AGTGCGGGTGTGAGTGTGAAGCGCTGGCCAAGATACAGCGGGAGGGGTCT
GCTAGGTCCCCGGAAATGCCGGGTTTGGTGTCAAAAAAAACGGAGCAACA
ACAAGCTTGTCCAGCGAACAAGGCGGGAGCGTTGAAAGGGGGCAGCGGAG
GAGGGGGAGGCAGAAGAAGAGGAGAAAGAAGGAGAGCCAAATTTAGCCCC
GATGTGGCTCCCGCAGAGATGTTTGTGAAGGACGCCGGGCTTACGCCCGC
TGGTGTGGCGAAGTATACAAACAAGCTTCTGAGTACCCGCGCGTACAAGG
TCAGCAATATCGAAGACGGGAACAATCTTGGCCTTACGCAGAACGTCATC
ATGATCCGAGAGGACGATGACAACAGGAAGAGGCGTTTATCCCTCGCAGG
CGGCCTGGCGCGTGGCGCGTCATGGGATTCTTACGCTTGTTTGAGAGGGA
ACAATATCGGCGCGCATGTTCGGTCGGCCAGGAGTTCTACCACGGCAAAA
CGGAAAGCGTAAACAAACAAGCTTCTGAGTACCCGCGCGTACAAGGTCAG
CAATATCGAAGACGGGAACAATCTTGGCCTTACGCAGAACGTCATCATGA
TCCGAGAGGACGATGACAACAGGAAGAGGCGTTTATCCCTCGCAGGCGGC
CTGGCGCGTGGCGCGTCATGGGATTCTTACGCTTGTTTGAGAGGGAACAA
TATCGGCGCGCATGTTCGGTCGGCCAGGAGTTCTACCACGGCAAAACGGA
AAGCGTAA
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