prot_H-paniculata_contig78758.15895.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig78758.15895.1
Unique Nameprot_H-paniculata_contig78758.15895.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length66
Homology
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BLAST of mRNA_H-paniculata_contig78758.15895.1 vs. uniprot
Match: A0A6H5L4I0_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4I0_9PHAE)

HSP 1 Score: 81.3 bits (199), Expect = 2.060e-16
Identity = 40/66 (60.61%), Postives = 52/66 (78.79%), Query Frame = 0 
Query:    1 HVYQAAKAATKAAFQHHLEQVKKLNPKAAEKLEGTPHHTWANYACRDNVIQGQTTSNSSEAVNNMI 66
            HVYQAA+AATKA F HH+ +V+KLNPKA  +L    H+TWANYACR NVI  Q+ SN +E+VN+++
Sbjct:  339 HVYQAAQAATKALFDHHMNEVEKLNPKAFIELNKREHNTWANYACRKNVIWEQSGSNMAESVNSLV 404
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BLAST of mRNA_H-paniculata_contig78758.15895.1 vs. uniprot
Match: A0A6H5JA84_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA84_9PHAE)

HSP 1 Score: 63.9 bits (154), Expect = 2.110e-11
Identity = 29/49 (59.18%), Postives = 39/49 (79.59%), Query Frame = 0 
Query:   18 LEQVKKLNPKAAEKLEGTPHHTWANYACRDNVIQGQTTSNSSEAVNNMI 66
            + +V+ LNP A +KL  TPH+TWANYAC++NVI  QTTSN SE++N +I
Sbjct:    1 MNEVQNLNPAAFKKLNDTPHNTWANYACKNNVIWDQTTSNFSESLNKLI 49
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig78758.15895.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L4I0_9PHAE2.060e-1660.61SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JA84_9PHAE2.110e-1159.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig78758contigH-paniculata_contig78758:161..358 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig78758.15895.1mRNA_H-paniculata_contig78758.15895.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig78758 161..358 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig78758.15895.1 ID=prot_H-paniculata_contig78758.15895.1|Name=mRNA_H-paniculata_contig78758.15895.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=66bp
HVYQAAKAATKAAFQHHLEQVKKLNPKAAEKLEGTPHHTWANYACRDNVI
QGQTTSNSSEAVNNMI
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