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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | signal peptide |
| Exons | 2 |
| Model size | 856 |
| Cds size | 504 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig7828.15850.1 >prot_H-paniculata_contig7828.15850.1 ID=prot_H-paniculata_contig7828.15850.1|Name=mRNA_H-paniculata_contig7828.15850.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=168bp
MKLPMRSCFAFLVTFKVWTMNVVSFVVAPPRVGGTIQRPVPVKAIVREVT
RPSGAKALRSENTPTEKDHRSSDGAAADDDGEATEAAAASSQQALGGLAG
AALPIGGIAATAADLPAPGQLVKKAMEPFEAEMDRMEAELKQKMEKNSLE
MERKLEEMLKDLSPLGE* back to topmRNA from alignment at H-paniculata_contig7828:1847..5222- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig7828.15850.1 ID=mRNA_H-paniculata_contig7828.15850.1|Name=mRNA_H-paniculata_contig7828.15850.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3376bp|location=Sequence derived from alignment at H-paniculata_contig7828:1847..5222- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CCTACCTCAACATCGAACGACATGAAGCTCCCCATGAGATCATGCTTTGC
CTTTCTGGTTACCTTCAAAGTATGGACTATGAACGTCGTTTCGTTCGTCG
TCGCACCACCCCGTGTCGGAGGGACGATTCAACGACCGGTTCCAGTTAAA
GCAATTGTGAGAGAAGGTGAACACAGAATCATGTGCCTGTACACCAAGCA
TTTAGTAACGGCTCTGCTTGCCAGTTCAGTAGCAGCATACAATCATGCCC
CTATGCATCAACGTTCGACATACATAGGCGGATCCCTATCGCTCACACCT
GTGCAAAGATTGTATCTCAGTCGCAAAAGGAAACATATTGTGATCTAAAA
CTCTTTGTAACGTCCCTGAAATCTTTGTTCAGTACAGCAAACAGACAGTA
AAAATCAGTAAATTTCCACTCTCCTAGTGCTTGTTGTAGTCTCAAGGCTT
CATGCCAAGCACAATTAGATACCACCCTACCCCAAAATGATCGTTACCTT
CGGTCGCCAGACAAATACCACACATTGCATTGCAGTACATACAACAGCAA
CTGTACGGTACCGTTATATTACCCATCTCAAAAACCCGCCGTTCACGGAC
AACGGCTCGCTGCATTTAGGGGCTCGCTCCGCTCGCATGTACTAACGCTC
ATGATAATTCGGTTTCGTAAAATCACTGGCGTACAGATCTTATTAAAAGT
TCCGAAACGACCATCACGATCCGTCGTGTTTAGAACCCTACTGAACGAAA
AAGTAGTCCTCTCGGAGAGTTTACCACTTTGTCGAATGTGATGTTTGAGG
TAGATTATCCGTTGTTGACAGCTTCATATCTTGTAGCATATATACTATGG
CTCCTCCAATAGTTATTGATGTCTCCAATGCGTGCTACGTCAGGGGTTAA
GTACTAAATAGTGAGAATTACACAATACAGCAGTACAGTACAGTAGTGCA
ATTCCAGGTGAAGTCAGCCTCATACTTGTCTGTCCTCACGTTACCTCCTT
CGGAACCGGATTTCATACACGACTCAAACACCGTGAATAATGATGAACAC
GTTCAGGGCCAAGGGCCATCCTAGCAATAACGTTTTTCCGCTGCAAATTT
CAAATTTCAAATTTCAAATATATACTGATTTATCGAGGCAATGTGTAATT
TCAGGCGATCTTGAAACACGGTATTTCGGGCACGACACACCCAATACACT
TTGGTCCTTGCGGCAAGGCTGTTTTAGCCCTGCACCAACATTTCCGCACC
TTCCAATATGTTGTCTACGCATACGTATATCATCATGTCTACACCATTTA
AAACTTAAAACTTGCATCCGAAAAAGCGACTGCTTCGAATGGTTCCAACA
TACATTCTGTAAATTAAGACACTTCACCAAGAATGCTAACCAGCCTCAGA
GGGCTGATTTAGATATCTTAGGACTGACAGGGGGTCGTTGTTTTTTTGCC
GATCAGGGCCTCATTCACTTGGATTCAGTATATGAGAAAAACGGTGAAAC
AAGCGGGACTTGTTCCCCTTGAAAACATCGCAGCAGGGTGTGTCGTGCAC
CACTCGCGAGGCATTTGCCTTTTAGTCGAACAGTGGGTACAGCAGGAGGG
AGCAACGAACCCACCTACCTAATCGACGCGCCGGCGACAGCCACGCGCGT
CAACGAGTATGCTCTCGCCGTGTACTACCGGTTGGTTTAGAGAGAGCACA
GAGCTGTCTGCGGAGTCCTGTGTCTCTAAAGGATTGAGAAGCTGAGGGAG
GGGCTTGCGGTATCTCGGGACTAAGATAGCGGCAGACAAGCCACGTTTCG
GAGGTGCTGCTGAAGACACATGTCCCTGACGGTATGCTCTGATGCCAATA
TATAATGGATGATTGGTCGGTGGATATATCCAGCGCATTTGCAGATAAGG
GAAATATCGTGGCAAGAGCGTGCAGTTTTTACATATTGCCTGATGGGAAG
GCACTTCAGTCGTTGCTCAATGTGGCTCTGTTGGTGGAGAAACGTCACGC
AGCTCCGAGCTCGCGACCTCGCACACCAAATTGACCTGAATAGAGTTTGA
TTTACGCCATCTGTTATCCAAGGATAATTAACTACCAGATATTCCGCACC
TCGCTGGTTCAGTGTCATACAATTCGATCGAAAGTAACCTCCCTCACCCG
TCTTACACACACAAGACCACCCTGAATCCAGGCACCCAGCCCCATTTTAG
TACTGGTACAAGTTACGTGGCGCGACAGAGACTATCTACGGTGAAGTTCT
TGGCAAAAGCGGCCAACTTTAAAATTATGCCGATGCGTGAGAGGAAGAAC
GCTCATCCCACTAAAGTTGACTCGTTTGCAACCTTGAACAGCGAGTACTT
GCTGCCAGACTATTTCGAAGCCATCCGCATGGCGTACGCAAGCAAAGCTC
CTGTCGTTCCGATCGAACAAATCATGAGGTTGTGACGTCTTATTTTTGTT
ATGTAAATATCTTGTTGGTAGATACATATCATCCTTCGATTAACCACGAC
AGAGTCTACGGATCCTATACGGAGGAGGCTCCGGTCTGCGCAACTCCCCC
CCTCTACTAGTCTCGCCACATGATCGTACCACTTCTCTTGATCTCTAACT
TTATATATGTGTCTTGCTCTTTTCCTCCCCTTCTTCCTGCCAATGACTGC
AACCGTATGGCTGTGCCCCTGAAATTAAATCGACAGTAACCCGACCGAGC
GGCGCGAAGGCGCTGCGATCCGAAAACACTCCAACGGAGAAGGATCATCG
TTCATCGGACGGTGCCGCTGCCGACGATGATGGGGAAGCAACAGAAGCAG
CTGCAGCGTCGTCCCAACAAGCGCTGGGCGGGTTGGCTGGAGCTGCATTG
CCGATCGGCGGTATTGCGGCGACCGCGGCCGATTTACCTGCTCCAGGACA
GCTCGTGAAAAAAGCGATGGAGCCTTTTGAAGCGGAGATGGATAGGATGG
AGGCGGAATTGAAACAGAAAATGGAAAAGAACAGTCTAGAAATGGAGAGA
AAGCTCGAGGAAATGCTCAAGGACTTGAGTCCTCTGGGGGAGTGACAAAT
GGGTTTTGTTTTTTCATTGTTTTTGTTTAGAGCTAATGCCTATTCTCTTT
TTCGTTGCTATTTGGTTTAGTGCATTAGCTGCGTGTGTGCATGCGCACTC
GACAGTGGTGTTCATGTAGTAATAGCTTCGTGTGTATGTGATTTAGAAAG
ATACGAAGCGCTTCGTGATTTACAAAGTTGTTCGTACTTGGTTGCGGCGT
CATGGCGCCAGCGGCTCCCACTTCTCTTCGTATGTATTCTGTTGCGATTT
TCAGTTGTATATTTGCGCTGTAAACAGCATCTGGTTTCATACGAGTAGAG
CGCTATTCATGTCAGCGATTTACAAC back to topCoding sequence (CDS) from alignment at H-paniculata_contig7828:1847..5222- >mRNA_H-paniculata_contig7828.15850.1 ID=mRNA_H-paniculata_contig7828.15850.1|Name=mRNA_H-paniculata_contig7828.15850.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1008bp|location=Sequence derived from alignment at H-paniculata_contig7828:1847..5222- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAAGCTCCCCATGAGATCATGCTTTGCCTTTCTGGTTACCTTCAAAGT
ATGGACTATGAACGTCGTTTCGTTCGTCGTCGCACCACCCCGTGTCGGAG
GGACGATTCAACGACCGGTTCCAGTTAAAGCAATTGTGAGAGAAGATGAA
GCTCCCCATGAGATCATGCTTTGCCTTTCTGGTTACCTTCAAAGTATGGA
CTATGAACGTCGTTTCGTTCGTCGTCGCACCACCCCGTGTCGGAGGGACG
ATTCAACGACCGGTTCCAGTTAAAGCAATTGTGAGAGAAGTAACCCGACC
GAGCGGCGCGAAGGCGCTGCGATCCGAAAACACTCCAACGGAGAAGGATC
ATCGTTCATCGGACGGTGCCGCTGCCGACGATGATGGGGAAGCAACAGAA
GCAGCTGCAGCGTCGTCCCAACAAGCGCTGGGCGGGTTGGCTGGAGCTGC
ATTGCCGATCGGCGGTATTGCGGCGACCGCGGCCGATTTACCTGCTCCAG
GACAGCTCGTGAAAAAAGCGATGGAGCCTTTTGAAGCGGAGATGGATAGG
ATGGAGGCGGAATTGAAACAGAAAATGGAAAAGAACAGTCTAGAAATGGA
GAGAAAGCTCGAGGAAATGCTCAAGGACTTGAGTCCTCTGGGGGAGTGAT
AACCCGACCGAGCGGCGCGAAGGCGCTGCGATCCGAAAACACTCCAACGG
AGAAGGATCATCGTTCATCGGACGGTGCCGCTGCCGACGATGATGGGGAA
GCAACAGAAGCAGCTGCAGCGTCGTCCCAACAAGCGCTGGGCGGGTTGGC
TGGAGCTGCATTGCCGATCGGCGGTATTGCGGCGACCGCGGCCGATTTAC
CTGCTCCAGGACAGCTCGTGAAAAAAGCGATGGAGCCTTTTGAAGCGGAG
ATGGATAGGATGGAGGCGGAATTGAAACAGAAAATGGAAAAGAACAGTCT
AGAAATGGAGAGAAAGCTCGAGGAAATGCTCAAGGACTTGAGTCCTCTGG
GGGAGTGA back to top
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