mRNA_H-paniculata_contig7812.15836.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_H-paniculata_contig7812.15836.1
Unique Name	mRNA_H-paniculata_contig7812.15836.1
Type	mRNA
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)

Homology

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BLAST of mRNA_H-paniculata_contig7812.15836.1 vs. uniprot
Match: A0A7S3ZT12_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZT12_9STRA)

HSP 1 Score: 286 bits (731), Expect = 1.630e-88
Identity = 151/330 (45.76%), Postives = 213/330 (64.55%), Query Frame = 1

Query:    1 MGGGASSAAGEQMEDIMAYSVMLGRAITHMNFPGMHSIKDFNLQPSEDNRK-----AHKKNSESSESVAKSESSEPPPPLIRADLVDYFTVHVDGEVIILEDVTRQNEDGWTPLHACCHSNTTADIGLKILEEMIARGGNIDLKTTRGPGSFNSEYTPLHMASAYGVVDLVKALLKAGADPNCRNSLDWNPLLEVCHRGFSGLATALVQAGADVSHIPSEDAGAGAHIMRGAPQSALGEAARGGFKSICKFLLNSGSDKDQKNHLGWTPLHEACYFNHLDTVQLLLVHGADPLAKNVQGAMPYNMSSLHAIRDLLREIGGEAAAKVMPTP 975
            MG GAS+  GE +E ++A + +LG+A++ M+FP M+ I+DF+   +   R      A ++N E  E        E P      D  + F V V GE I+++DV R NEDGWTPLHACCH++ T    L IL+E++ R  +++ KT RGPG++ S +T LHMA+AYGV  LV+ALL+AGAD N +N   W PLLE CHRGF G+   L+     + HIP  +A     + +  PQSALGEA+R GF+ I K LL +GSDKD  NHLGWTPLHEA ++NH+D  + LLV+GA+   K+ +GA+P++++SL ++RD+L+E+GG  A      P
Sbjct:    1 MGAGASADGGE-LEQLVACTYLLGQALSSMSFPDMYRIQDFHADDAPRLRSDLGLLADRENEEREE--------ERP-----FDYSERFHVTVSGERIVVDDVERANEDGWTPLHACCHNHQTMGAALDILKELVKRKASLERKTVRGPGAYASGWTVLHMAAAYGVEPLVEALLEAGADVNTKNDQGWTPLLEACHRGFDGIVRKLLTGNKTLDHIPDVEASKAFPLAKPPPQSALGEASRCGFEDIVKVLLEAGSDKDLVNHLGWTPLHEAAFYNHVDVARTLLVYGANATKKDARGAVPFHVASLPSVRDVLKELGGPDACPERDCP 316

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BLAST of mRNA_H-paniculata_contig7812.15836.1 vs. uniprot
Match: D8LGQ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGQ3_ECTSI)

HSP 1 Score: 246 bits (628), Expect = 6.610e-78
Identity = 127/199 (63.82%), Postives = 156/199 (78.39%), Query Frame = 1

Query:    1 MGGGASSAAGEQMEDIMAYSVMLGRAITHMNFPGMHSIKDFNLQPSEDNRKAH-KKNSESSESVAKSES-------SEPPPPLIRADLVDYFTVHVDGEVIILEDVTRQ-NEDGWTPLHACCHSNTTADIGLKILEEMIARGGNIDLKTTRGPGSFNSEYTPLHMASAYGVVDLVKALLKAGADPNCRNSLDWNPLLEV 570
            MGGGASSAA EQME+++AYS +L + IT M FPGMHSIKDFNL P +D+  +  KK  ES  S A ++S       SE PPPL+  +L D FTV VDGEV++L+DVT+Q NEDGWTPLHACCHS TTA IGL+ILEE++A GG+++L+T RGPG+FNS +TPLHMA AYGV +LV+AL+KAGADPNCRN  DW PLL +
Sbjct:    1 MGGGASSAAAEQMEEMIAYSTLLSKTITCMTFPGMHSIKDFNLLPKKDSGASMLKKREESGRSTAATDSFSRTSSGSEGPPPLLDPELEDKFTVVVDGEVVVLDDVTQQQNEDGWTPLHACCHSATTAAIGLRILEEVVAMGGDLNLRTKRGPGNFNSGFTPLHMACAYGVKELVEALIKAGADPNCRNDFDWGPLLSL 199

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BLAST of mRNA_H-paniculata_contig7812.15836.1 vs. uniprot
Match: A0A7S1TU65_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TU65_9STRA)

HSP 1 Score: 229 bits (584), Expect = 1.840e-66
Identity = 130/332 (39.16%), Postives = 190/332 (57.23%), Query Frame = 1

Query:    1 MGGGASSAAGEQMEDIMAYSVMLGRAITHMNFPGMHSIKDFNLQ--PSEDNRKAHKKNSESSESVAKSESSEPPPPLIRA-------DLVDY-----FTVHVDGEVIILEDVTRQNEDGWTPLHACCHSNTTADIGLKILEEMIARGGNIDLKTTRGPGSFNSEYTPLHMASAYGVVDLVKALLKAGADPNCRNSLDWNPLLEVCHRGFSGLATALVQAGADVSHIPSEDAGAGAHIMRGAPQSALGEAARGGFKSICKFLLNSGSDKDQKNHLGWTPLHEACYFNHLDTVQLLLVHGADPLAKNVQGAMPYNMSSLHAIRDLLREIGGEAA 954
            MGGG S+     +EDI++ + +  ++        M+SI DF+ +  P    R      +    + AK E  E       A       D  DY     F V +  E + ++DVT  NE GWTPLHACCHS      G ++L E++   G+++ +T RGPGSFN+ +T LHMA AYG++ +V+AL++AGAD +CRNS+D                         V+HIP ++  +G+  ++  P +ALGEAAR GF +I K L+ +G+DKD  NH GWTPLHEA + NHL TV+ LL++GA+P  +N +GA+PY +++L A+R  +REI GE A
Sbjct:    1 MGGGTSAM--RDLEDILSITYIASQSFMSAGVQDMYSIYDFHAEDAPPLTRRPTTTGRTPFGANFAKEEPGEGDDAAAAAAEEAEAKDPSDYATEGKFMVAMGDEKVYIDDVTVTNEAGWTPLHACCHSVGAVAAGKEVLAEVVRVNGDLNARTERGPGSFNANWTALHMACAYGILPMVQALIEAGADVDCRNSIDXXXXXXXXXXXXXXXXXXXXXXXXXVNHIPDDECLSGSPFLQAPPTTALGEAARCGFSAIIKVLVEAGADKDLANHEGWTPLHEAAFHNHLGTVKTLLIYGANPTIRNKKGALPYQLAALPAVRTTIREIWGEDA 330

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BLAST of mRNA_H-paniculata_contig7812.15836.1 vs. uniprot
Match: A0A7S3UV44_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UV44_HETAK)

HSP 1 Score: 221 bits (563), Expect = 3.070e-66
Identity = 136/340 (40.00%), Postives = 184/340 (54.12%), Query Frame = 1

Query:    1 MGGGASSAA---GEQMEDIMAYSVMLGRAITHMNFPGMHSIKDFN---------LQPSEDNRKAHKKNSESSESVAK---------SESSEPPPPLIRADLVDYFTVHVDGEVIILEDVTRQNEDGWTPLHACCHSNTTADIGLKILEEMIARGG-NIDLKTTRGPGSFNSEYTPLHMASAYGVVDLVKALLKAGADPNCRNSLDWNPLLEVCHRGFSGLATALVQAGADVSHIPSEDAGAGAHIMRGAPQSALGEAARGGFKSICKFLLNSGSDKDQKNHLGWTPLHEACYFNHLDTVQLLLVHGADPLAKNVQGAMPYNMSSLHAIRDLLREIGGEAA 954
            MGG AS+     GE +ED++A S++LGRAI  ++FP M+ I DF+         L+  +D                          +   + PP   + +      + V  + + +ED  RQNE GW PLHACCHS  TA  G+ ++E M A GG + + +T RGPG FN+ +TPLH+A+AYGV  +V+ LL AGADPN  NSL W PLLE CHRGF+ LA  LV AGA V H+P  +  A A  +R  PQ+ L EAAR G   I + LL+ G+DKD+ N LGWT LH                          QGA+ Y ++ + A +  LR++GGEAA
Sbjct:    1 MGGAASAQVVTIGE-IEDVVACSLLLGRAIAAISFPDMYRIYDFHCKDAPPLFSLEDDDDXXXXXXXXXXXXXXXXXXXXXXXXXXNPEEDIPPKNYKTE--GLLALKVGEDTVYIEDPNRQNEAGWLPLHACCHSQATAAAGVALIEAMAASGGADWNARTARGPGPFNAGWTPLHIAAAYGVRPVVEELLAAGADPNVENSLTWTPLLECCHRGFTHLARVLVDAGARVDHLPDAEVCARAPFLRAPPQAPLAEAARVGAAEIVRLLLDRGADKDRTNALGWTALHXXXXXXXXXXXXXXXXXXXXXXXXXXQGALAYQLTVVPAAKQALRDMGGEAA 337

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BLAST of mRNA_H-paniculata_contig7812.15836.1 vs. uniprot
Match: A0A7S2WT85_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WT85_9STRA)

HSP 1 Score: 196 bits (499), Expect = 1.760e-54
Identity = 119/327 (36.39%), Postives = 167/327 (51.07%), Query Frame = 1

Query:    1 MGGGASSAAGEQMEDIMAYSVMLGRAITHMNFPGMHSIKDFNLQPSEDNRKAHKKNSESSESVAKSESSEPPPPLIRA-------DLVDYFTVHVDGEVIILEDVTRQNEDGWTPLHACCHSNTTADIGLKILEEMIARGGNIDLKTTRGPGSFNSEYTPLHMASAYGVVDLVKALLKAGADPNCRNSLDWNPLLEVCHRGFSGLATALVQAGADVSHIPSEDAGAGAHIMRGAPQSALGEAARGGFKSICKFLLNSGSDKDQKNHLGWTPLHEACYFNHLDTVQLLLVHGADPLAKNVQGAMPYNMSSLHAIRDLLREIGGEAAAK 960
            MGGGAS+   ++ME+I+  + +LGR+I  ++FP M+SI+DF+   +   + A    S  +    + E                  D    F V V  + ++++DVT  NEDGWTPLH+CCHS+TT   GL ILEEM  R  ++++KT RGP + NS +T LHMASAYGV  LV  LL   A+ NCRNSL                       GA +S +P  +A +     R  PQS LGEAAR GF  IC+ LL+ G+DKDQ+N +GWT                                  Y ++SL  +++ + E+GGE A +
Sbjct:    1 MGGGASAM--QEMEEILTCAYLLGRSIVAISFPDMYSIRDFHSPDAPPLKNAQASFSPDNPFGLELEQXXXXXXXXXXXXXXXAFDYSGRFVVIVGDDKVVIDDVTVANEDGWTPLHSCCHSHTTVSAGLAILEEMSYRNASLEVKTKRGPSAHNSGWTALHMASAYGVEPLVVQLLAHRANANCRNSLQXXXXXXXXXXXXXXXXXXXXXXGASMSFVPDREAASNPPFSRPPPQSPLGEAARCGFTDICRILLDRGADKDQRNDVGWTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYQLASLPPVKEAIEELGGEDALR 325

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BLAST of mRNA_H-paniculata_contig7812.15836.1 vs. uniprot
Match: A0A7S2XYQ7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYQ7_9STRA)

HSP 1 Score: 185 bits (470), Expect = 1.820e-52
Identity = 98/249 (39.36%), Postives = 131/249 (52.61%), Query Frame = 1

Query:  250 FTVHVDGEVIILEDVTRQNEDGWTPLHACCHSNTTADIGLKILEEMIARGGNIDL---KTTRGPGSFNSEYTPLHMASAYGVVDLVKALLKAGADPNCRNSLDWNPLLEVCHRGFSGLATALVQAGADVSHIPSEDAGAGAHIMRGAPQSALGEAARGGFKSICKFLLNSGSDKDQKNHLGWTPLHEACYFNHLDTVQLLLVHGADPLAKNVQGAMPYNMSSLHAIRDLLREIGGEAAAKVMPTPTFSV 987
            F V V  + +  +DV   NE+GW PLHACCH+   A  G +IL+EM+ +G   DL   KT RGPG +N  +TPLHMA AYG+  + +ALL AGADPNC+NSL                        A + ++P  D+      +R   Q AL                     KD+ N LGWTPLHEA +F   + VQ LLV+G D  AK   GAM Y+++SL  I+ +++++GG  AA  M  P  SV
Sbjct:   59 FGVKVQDKTLFFDDVNEANENGWLPLHACCHNQGLAGAGCEILDEMVRKGAGADLINAKTKRGPGPYNKGWTPLHMACAYGIPRVAEALLVAGADPNCQNSLTXXXXXXXXXXXXXXXXXXXXXXXAQLDYLPDIDSSTATPFVRAPAQHALAXXXXXXXXXXXXXXXXXXXPKDKANQLGWTPLHEAAFFCQKEIVQTLLVYGVDATAKTSMGAMAYHLASLPDIKQVIKDLGGAEAAVEMDQPLKSV 307

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BLAST of mRNA_H-paniculata_contig7812.15836.1 vs. uniprot
Match: A0A6H5JEM2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEM2_9PHAE)

HSP 1 Score: 177 bits (449), Expect = 8.120e-52
Identity = 83/127 (65.35%), Postives = 105/127 (82.68%), Query Frame = 1

Query:  349 TTADIGLKILEEMIARGGNIDLKTTRGPGSFNSEYTPLHMASAYGVVDLVKALLKAGADPNCRNSLDWNPLLEVCHRGFSGLATALVQAGADVSHIPSEDAGAGAHIMRGAPQSALGEAARGGFKSI 729
            T+ D+ L+  +E++A GG+++ +T RGPG+FNS +TPLHMA AYGV +LV+AL+KAGADPNCRN  DW PLLEVCHRGF+ +A  LV+AGADV+HIP   A  GAHIMRGAPQSALG AARGGF+++
Sbjct:    4 TSGDVSLQS-QEVVAMGGDLNPRTKRGPGNFNSGFTPLHMACAYGVKELVEALIKAGADPNCRNDFDWGPLLEVCHRGFTAIAALLVKAGADVAHIPDAKASCGAHIMRGAPQSALGAAARGGFQTV 129

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BLAST of mRNA_H-paniculata_contig7812.15836.1 vs. uniprot
Match: D8LGQ2_ECTSI (U-box domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGQ2_ECTSI)

HSP 1 Score: 169 bits (428), Expect = 1.010e-45
Identity = 78/100 (78.00%), Postives = 85/100 (85.00%), Query Frame = 1

Query:  736 FLLNSGSDKDQKNHLGWTPLHEACYFNHLDTVQLLLVHGADPLAKNVQGAMPYNMSSLHAIRDLLREIGGEAAAKVMPTPTFSVCLNDQGHMLVHITAGK 1035
             LL + SDKDQ N +GWTPLHEACYFNHLDTVQLLLVHGADP  KNVQGAMPYNM+S   IRDLLREIGGE AAK MPTPTFSVC+N+QG M V +TAG+
Sbjct:    1 MLLENESDKDQPNGMGWTPLHEACYFNHLDTVQLLLVHGADPTIKNVQGAMPYNMTSFQPIRDLLREIGGEEAAKTMPTPTFSVCVNEQGQMFVRVTAGE 100

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BLAST of mRNA_H-paniculata_contig7812.15836.1 vs. uniprot
Match: A0A6G0WYG7_9STRA (U-box domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WYG7_9STRA)

HSP 1 Score: 164 bits (416), Expect = 9.670e-43
Identity = 124/369 (33.60%), Postives = 182/369 (49.32%), Query Frame = 1

Query:    1 MGGGASSAAGEQMEDIMAYSVMLGRAI------THMNFPGMHSIKDFNLQPSEDNRKAHKK---------NSESSESVA-----KSESSEPPPPLIRADLVD------YFTVHV--DGEVIILEDVTRQNEDGWTPLHACCHSNTTADIGLKILEEMIAR--GGNIDLKTTRGPGSFNSEYTPLHMASAYGVVDLVKALLKAGADPNCRNSLDWNPLLEVCHRGFSGLATALVQAGADVSHIPSEDAGAGAHIMRGAPQSALGEAARGGFKSICKFLLNSGSDKDQKNHLGWTPLHEACYFNHLDTVQLLLVHGADPLAKNVQGAMPYNMSSLHAIRDLLREIGG----EAAAKVMPTPTFSVCLNDQG 1005
            MGGG S+     +  ++A ++M+G A+       ++ FP M+ + DF++  ++   ++HK          N++ S  V      + E+S  P     A  +D      Y  VHV  D  V+ LE +   N+DGWTPLHA CH+   A+ G  IL+ ++A+    N++ KT RGPGSF S YTPLH+A AYG+  LV  L+KA AD +  N + W                     GA    I  E A     +     Q+ LGEAAR G     K LL  G DK+  N L WT LHEA Y N  D V+ L+V+GAD L +  +GA   +++    I+ +L ++      EA+ K  P P  ++  +D G
Sbjct:    1 MGGGISTQG--DLSQMIACTMMIGEAMFQGLDPRYVRFPDMYRLYDFHVGKTK--FRSHKPGGSVTYVVFNADGSTGVLDRSKLQEEASSAPKGDSNATDIDEEDTSKYLIVHVGEDRIVLALEALNTPNDDGWTPLHASCHTLNAAEAGKTILKAILAQDPSANLNQKTIRGPGSFTSGYTPLHIACAYGMETLVTQLIKAKADVHVTNDVQWXXXXXXXXXXXXXXXXXXXXXGAKAETICPEFA-----LCPFPGQTPLGEAARQGHLDTVKLLLEHGVDKNAVNALNWTALHEAAYHNRTDVVRTLVVYGADVLIETNRGAKASDLTISCEIKTMLEDMSQAERKEASKKSPPKPAVAIEASDSG 360

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BLAST of mRNA_H-paniculata_contig7812.15836.1 vs. uniprot
Match: A0A2R5G6V1_9STRA (Ankyrin repeat domain-containing protein 27 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G6V1_9STRA)

HSP 1 Score: 157 bits (398), Expect = 9.520e-40
Identity = 92/224 (41.07%), Postives = 119/224 (53.12%), Query Frame = 1

Query:  265 DGEV-IILEDVTRQNEDGWTPLHACCHSNTTADIGLKILEEMIARGGNIDLKTTRGPGSFNSEYTPLHMASAYGVVDLVKALLKAGADPNCRNSLDWNPLLEVCHRGFSGLATALVQAGADVSHIPSEDAGAGAHIMRGAPQSALGEAARGGFKSICKFLLNSG-SDKDQKNHLGWTPLHEACYFNHLDTVQLLLVHGADPLAKNVQGAMPYNMSSLHAIRDLL 930
            D EV + L  +   NE GWT LHACCH         KI+  M+ RG ++D KTTRGPGS+ + +T LHMA AYG+  +V ALL AGAD    NS+ W PL E  HRG++ +A  L++A A    I      A  H      Q  L  A R     +   LL +G +  D +N  GWT LHEA +F H   V+ L+ H  + L K  QG    +  S  AIR+LL
Sbjct:  135 DREVPVALATIGEPNESGWTILHACCHQQACIPAAEKIIAVMVERGIDVDQKTTRGPGSYATGWTALHMACAYGLTPVVSALLAAGADVETTNSIGWKPLYEAVHRGYTDIARLLLKATATPDEIIPASLIAPYHA-----QYPLAHACRQNHPEVVTVLLEAGGAHVDAQNEGGWTALHEAVFFRHEACVRTLIDHNCNLLIKTKQGYTALHFESAPAIRELL 353

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig7812.15836.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig7812.15836.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A7S3ZT12_9STRA	1.630e-88	45.76	Hypothetical protein n=1 Tax=Pelagomonas calceolat...	[more]
D8LGQ3_ECTSI	6.610e-78	63.82	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A7S1TU65_9STRA	1.840e-66	39.16	Hypothetical protein n=2 Tax=Phaeomonas parva TaxI...	[more]
A0A7S3UV44_HETAK	3.070e-66	40.00	Hypothetical protein (Fragment) n=1 Tax=Heterosigm...	[more]
A0A7S2WT85_9STRA	1.760e-54	36.39	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]
A0A7S2XYQ7_9STRA	1.820e-52	39.36	Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa...	[more]
A0A6H5JEM2_9PHAE	8.120e-52	65.35	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LGQ2_ECTSI	1.010e-45	78.00	U-box domain-containing protein n=1 Tax=Ectocarpus...	[more]
A0A6G0WYG7_9STRA	9.670e-43	33.60	U-box domain-containing protein n=1 Tax=Aphanomyce...	[more]
A0A2R5G6V1_9STRA	9.520e-40	41.07	Ankyrin repeat domain-containing protein 27 n=1 Ta...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig7812	contig	H-paniculata_contig7812:4035..10460 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	248.8
Seed ortholog evalue	3.6e-63
Seed eggNOG ortholog	2880.D8LGQ3
Hectar predicted targeting category	other localisation
EggNOG free text desc.	ankyrin repeats
EggNOG OGs	2D5WU@1,2SZZ8@2759
COG Functional cat.	S
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
Exons	8
Model size	1035
Cds size	1035
Stop	0
Start	1

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig7812.15836.1	prot_H-paniculata_contig7812.15836.1	Halopteris paniculata Hal_grac_a_UBK monoicous	polypeptide	H-paniculata_contig7812 4035..10460 +

The following CDS feature(s) are a part of this mRNA:

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at H-paniculata_contig7812:4035..10460+
coding sequence from alignment at H-paniculata_contig7812:4035..10460+

protein sequence of mRNA_H-paniculata_contig7812.15836.1

>prot_H-paniculata_contig7812.15836.1 ID=prot_H-paniculata_contig7812.15836.1|Name=mRNA_H-paniculata_contig7812.15836.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=345bp
MGGGASSAAGEQMEDIMAYSVMLGRAITHMNFPGMHSIKDFNLQPSEDNR
KAHKKNSESSESVAKSESSEPPPPLIRADLVDYFTVHVDGEVIILEDVTR
QNEDGWTPLHACCHSNTTADIGLKILEEMIARGGNIDLKTTRGPGSFNSE
YTPLHMASAYGVVDLVKALLKAGADPNCRNSLDWNPLLEVCHRGFSGLAT
ALVQAGADVSHIPSEDAGAGAHIMRGAPQSALGEAARGGFKSICKFLLNS
GSDKDQKNHLGWTPLHEACYFNHLDTVQLLLVHGADPLAKNVQGAMPYNM
SSLHAIRDLLREIGGEAAAKVMPTPTFSVCLNDQGHMLVHITAGK

mRNA from alignment at H-paniculata_contig7812:4035..10460+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_H-paniculata_contig7812.15836.1 ID=mRNA_H-paniculata_contig7812.15836.1|Name=mRNA_H-paniculata_contig7812.15836.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6426bp|location=Sequence derived from alignment at H-paniculata_contig7812:4035..10460+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGGCGGTGGGGCGTCCTCCGCCGCGGGGGAACAAATGGAGGATATCAT
GGCCTACTCCGTCATGCTAGGCAGGGCGATAACCCACATGAACTTTCCAG
GTATGGAATCTGTCAGTACCCGCACAGGGGAGATAACGACCGCGTTTTTT
CCACCCTCATAAGCCAAAAATGTCCACTTGAACGCTCCTCCGATGTGTCA
ACGATGCGACGCTAAGTCTTGACACCCTAAAATGTGGTTGATCATAGAAT
ACGCAAGTATACCTCTACTGCAGTTGCTTCCGAGTGAAGACGCAAGGCGA
ACATCGAGCTGCGAGACTGACGCAGTCCTTGGCGTATCGCACGGGGTGTG
CTGATTTTTCGCGAGAACACAGGCATGCACAGCATCAAGGACTTCAACCT
TCAGCCCAGCGAAGACAATCGTAAGGCGCACAAGAAAAATTCAGAATCAT
CCGAGTCAGTTGCCAAGAGCGAAAGCAGCGAGCCCCCCCCCCCTCTCATC
CGCGCTGATCTCGTGGATTATTTCACAGTACACGTGGATGGCGAGGTGAT
TATCCTTGAAGATGTCACGCGACAGGTACGACAGACAAGACGGCAGACGT
AGGAAACTTTTAGCGTCGTTGTACGAAAAGCGGAGCACTTCGGGTTGAGT
CACTATGGCAGGCCCGAATGCGTACATGCACCGTTTCCAAAGGGCGCTGA
TAGAATAATCGATCGCACGAAAGCACGAATTGTTGGTTTGTACGCTTGGC
GAACCCTCCTCTCGCCCCGTGTTTGATACGCGGAATGAAATCTTCACACA
AATGCAACGGGCACGGATTGAACCGGCCGGCGATGTGTTGAACTAAAACA
AATTCAGTGAGGTGGGTCAGCCGCTAGCGTACTCAGCGGCTTTTCTGCGT
AGTATCGAAGAAACGGAACAGCTTTCAGGACCGCCCACTCGCTAAAACCT
AAAACCTCGCACCACCCCGTACCGATGCTTCGTCGGGTTTCCTTCTCAGA
ACGAGGACGGATGGACGCCGCTGCACGCGTGTTGTCATAGCAACACAACT
GCCGATATCGGCCTCAAGATTCTTGAGGTGCAAAATCAAGACAATAGATA
AAACCCCTGCCTGACACTGCACGATTCTTTCCTCCCTCGTGGTCGATCGA
CACTTGAGTATGTTAGCGTGGAACGTCTGGTTGCTCAAGTCGCCTTGGCA
GTTACGAAGCACCCTTGCCCAGCGATATCATGAATCGTTCCCCGTACCCA
GCTACTGCATGTAAGAAAGCAGACGAGATTGTTACCATGGCGGGCGGGTG
GATGGGTGCGCGGGCGGGCGGTTAGGACTAGGCGTTCGGGTTAGAGGTTG
GTAATGTGTTGAATCCTGCTTGCTCCTATTTTCCTCTTGAGCGGACTCCC
GGATGCAGAAAAGAAATCTATAACAGTGTCGGCAACATCGGGCCATATCT
TCCAACTATGAGGTACATACTATCAGCGTGCAGGCGACATACCTGATATA
CCATGGAACGTGGAATGACTGTCACGCTAAGAGCGATGTCTTACAGTTAC
TGTTACTGATATAGAACCATCGACAAAACCTCGTAAAAGCATGTTTACCC
CGTGATATTTGATCATCTACACTTCGCGAGCATTTCTGGCTGTTCCTGTG
CTCAAATTCAAACAGGAAAATGATATGTCGAAATAACAGATAGTTGAACA
TCCAAGCGAAAAATAATCCAAACCGACAAAGACATACACACAGCATATCC
AGCAGATAGTCCGATGACCTGGTATTTTGTTCATCGGAAGGGGATGCCTG
GAGTCATGCATAGAACCTCCTATGCCGGTGCCTCTCCGGAGTAACGCGCT
GACTCTCTGGCACACTATCTCTCGGAGCTCCTGTTCTCTCTTTCTGTTCA
AAGAGCCGTCGTCTGAAAGAGAATTACCAGGAAATTTACTGTACCAAATG
TGCGGATGAAGGACCCAAAGCACACAAAGCCCGAAGCTAACTCTAGGTAG
TCGCACTAGAACCCCCCCTTCTCCCACCCCCGCAACTGTTCCCTTTCCCA
AACAATAATTGCACGCATCCCTCAGGAAATGATAGCTCGCGGGGGAAATA
TTGACCTTAAAACCACGAGGGGTCCTGGCAGTTTTAATTCGGAATATACG
CCACTGCACATGGCCAGCGCGTACGGGTGAGTTGAGATACCATCTAGGTT
TGAGTTTTGGAACCGATAGCTGCGATCAGATACGTGCCACACTAACTATT
CGCGGGTGTGAGGGAGGGTACACTTGGAAAGGGAACCAATGAGATGTCGG
CGGTCGGATTTGCGAGGAGGTAAAACAAAGGGCAAAGCGAATTGTGGGTA
GTTTTAAGGATTCCGACGGTGGCGGTACGTTTCGCTATATACGGACCACG
TAGGTTCAGCCACACCGCTTGTTGAAGCCGTCGAAATTACTCCATCAACG
TTGTGTTTTCGACCACCAAAGGGGTTCTCGCTTTCTTTTACAGATCTGTC
GGCACAAGAAAATCATTGCTCTCCTCCCTAGGCCTTCGTTATCGCATGTA
TTTATGTTACATGATCTGAAATGGATTTGGTCCACTCGCACCACTTATCC
CTCGCAACGAATCACGCTATAACGGCCGCAAACTCTAGAGTGGTAGATCT
GGTGAAGGCGTTGCTCAAGGCGGGAGCTGATCCTAACTGCAGGAACAGCC
TGGACTGGAACCCCCTTCTGGTGAGCGCTGCTGACATTGACTGCGGGAAA
CAGCATCTACATTTTTCCATTTTTTCGGGCCCGCTTTTCTGCCCTAGCGT
AGAGTCAGCGATAACCGAGCACCTCTTTTCTCCTTCAAGTAACGAGTACA
CCCGTGAGTAGTAAAACATGCGCATGGATTCCTTCGTTTAGTAAAAAAGG
AAGGTTGTGAGAGCGAGAGCAACGTTTCGAACCGTTCGGTTTCATCTGCA
CTGCGCGTCGCAAGCGGAATGCATTCGAACATGAACTGGCACAAAAATAC
AACAAAGCGGAAACCACCTTTCGTTCGTAAACCCATACTTCAAGGGTTTA
ACGCAACACGGTTGTATTACATTCTCCAAGGCACCATAAAATAGGCCGTT
AGAGCATTGTACACAACCGTGGTGCCTTTTAATTGACTGGTTCGCCGCTG
CACAGCATCTCGCTTCGGTGTTCGCACACCTGGATGTTTTCAGTTACTGC
AGTAGATCGATGGGCGGGGTGCGCCAAAACGCCACATGTTACTCCGGAGT
GTAACAGCAATACGTTCAACCATACGTTGTGTGCTTGTCCGGATTTGCAG
TAGATTGTGTGTTTTCTCTCATGATGGCGTGCGGGGAGGGTTTGTTTCCC
TTGAAGCTCGAAACAAGTTCCGTAAGAACGATTATGTCCAAGAGGAAGTA
GAGTGTGATGGAGCTTTTTGGCCAGCTTCCAACTGACAGGTGATCCTACT
TTTCTTTGGGAGGGATGCTCTCGAAGAAAAAACACGAGACTAGGTTGGAT
GATCTTCGGCGTTGGGCAGCTGGGGTAGCTTTCTGAACGGGCGAAATGAA
AACGTGAACGGTTAAATTATCGCTGAATACGCATCTAGAGCGACATGGGT
AACTTGTTTCCCCCCTGGTTGCTGCTCTGGAAAAATACCACCGCCAGGTG
TCAACAGATACGGCAATTGTACGCTGTCGTCTTGAAGAAGTTGGGGTGAA
TTGCTGTTTACTCATGAAAACTATATGTCTATCTCGAGAAAATTAAATGT
TGCCGGTCTTAGGTAAAAGTAAGCAGGTTCTTCGGTGTCCAAGTACTTTA
GGTTAGTGTAGGGATGCAGACAAAGACATGGTGAAGTACTATAGTACATT
GCTTTCCATCTACGGAGGGTACGTTTTTTCACCCTGTGGTTGAATATTTC
AACTTGTATTCGACCAAGGAGTTAGATTTAGTGATTCCCAAAACCTCGAT
ATTCAACTACAGTACAATGTTGCAAACATTCACGTCTTACTTATGCAGCA
ACGCAAGCTACCCTAGCGGTGTCCGTATATACTGCCAATAGGTAAATATG
TCGTACTTGCCCGTATTTATTCCTCCACCTTGTCAACGTTAATCTCCCGG
AACAAGGAGCGCAGCATATATGCCGTCACCTAACCTACTATCGGGACCAC
GTCGATTGTGTGCTGATATGCCAAACGAGGCTAGCTAAGCTGATCGATCC
ATTTTGAGTTTTGCAAACCTACGAACGTCCTCTGAAGGTGCATGTGAGTG
CCACATCTCGTTGACAAGTTGCTACAGTGAATTTTCGATGGCAAAACGGC
AGAGAAAATTATTATACCCGAGGATTATTTCTAGCGAACACTGTTTTCGG
CGGAAACTGTAAAATATGGGAATCTGGGAATCTAGGAGTTTGAGGCAAAA
TACGAAAAGAGCCGAAAGTTCACGATTTCAAAATTCCGACAAGATATCGA
TTTTTTTTATATCTCCCATTTTTTCTATTCGACCGCATTGGGATCCCAGC
TCTTTCGACGGTCCACCCCGAACTCCCACGTCTCCAGATTTCATAGTTGC
TGCCGAACACGTTGTTGCTACAACTAACTCTCAACGTTCTGCCCCCAAAT
TCCTAGATTTCTTCATTTCCGACGAAAACATGACCACCAGAAATGACCGC
AAGTGCAACACAAAAGTTGAACAATGTGGTCCTCATCGTCAGGTTTCACC
GCCGATTTAAGCCATCACGATAAAAAATATACTTGTCGCGGTAATGACAC
ACCATCAACAGGAGGTGTGCCACCGAGGATTCAGTGGCCTGGCTACCGCG
CTCGTGCAGGCAGGGGCTGACGTTTCCCACATCCCGTCCGAGGACGCCGG
TGCCGGCGCGCATATCATGAGGGGCGCGCCGCAATCAGCACTTGGAGAAG
CCGCGCGTGGAGGATTCAAGTCGGTGAGGAGAGCGGAAAGCGAAAGAATG
TGGGTTTTGAAGGGTGAGATTGGTTGAGTCAATCGGTTCAAGGGAAGGCT
TGTTTTTGTGAATCAGAGTCGATCGGCGCGATTTCTGTGTCTGTATTTTA
CGGAGAGTTGATAGATACGGTCGTAAGGTGATACGGCCGGTCTTGGAACA
TTTTCCGTCGCGTTTTTGTTCAAGGGTGTTGTGATGACGGTGATGATTAT
TCTCGGAACAGTTTTTTGTTTCCTCTATTCAAGAGTTTTCGCTGGCGAAG
ACGGTGTATAATTTCAAGTTTTAGGTATAGTGTCATGTGAAGGGATTATC
CAAGTCGGCGGCTATATAACTATATGGCTTCATGCGCTATAATGCGGTTG
GGGTCTACTGAACGGGATTCATATGAAAGTCTTGGGACATGTAACTCCGA
AGCTTGACATGCTCTATTTTTCAGTGAATCAGCCTAAGACTCTTGGAAAA
TTTCACACCGCAGGAAAGATGATACATTAATGAGATAAATGCTTGTATCT
CCGAACCGAACGAAGAAAAACTGCAAGGGTATTATACAGTTCAAGTTGTC
AGAAACCAACAACAGCAAATGTTTCAAATCGTACTCTATTCAGTGAAAAC
AAGACAAGAGTCTAGACACACAAAAGTAACAATATAATCGCTTTACTAAT
AAATAAACTCCTTGTTGATTTTCCCTTCAAACCGTACACAATGGGCATAG
ATCTGTAAGTTCCTCTTGAACTCCGGGAGCGACAAGGACCAGAAGAACCA
CCTCGGCTGGACTCCGCTGCACGAGGCCTGCTATTTCAACCACCTCGACA
CGGTGCAGCTCTTGCTGGTGCACGGGGCCGACCCGCTCGCCAAGAATGTT
AGTGTCCTCTCCCGCCCGACAGACTCTTGGCGCATAGTATCGCACGTATT
GCAGTAGGAAGAGGCATGGTTCTGTATCAAAACTTGACGAGGGGTATGGA
ACTTTGATACTTGCGAATATCAGCATTGCGAGCGGACTCTCTGGAAGGGG
TGGTGTGGGTTTTGGAAGCTGTGATATCTTCGCCAGCGTTGAGATGAACA
ATTCGAGGTTTACCAGAGGACTGTTTGGCGCAACGCACTTGCGCTGATCT
ACTCTGCTTGCGCCGTGAAAGGACATATTTTTTATTATTGGCCTACGGCT
TTCAGAACAAGGCTTCGTTGTTAATGCGTTCAATCAGTAATTTCATCACC
ATCTGTCGTTAGAGGAAGTCGCTATTATATCACACTCACATCATTGCGAT
GGATTGTGACACGTCGAGTTTCCTTCACTCTTGCTACTGTTGTGTTGGCC
GAAAACCTGAACAGGTTCAGGGAGCCATGCCGTACAATATGTCGAGCCTT
CACGCAATCAGGGACTTGCTGAGGGAAATTGGGGGGGAAGCTGCGGCGAA
GGTTATGCCGACGCCGACGTTCTCCGTCTGCCTTAATGATCAGGGTCATA
TGTTAGTCCACATCACCGCCGGCAAG

Coding sequence (CDS) from alignment at H-paniculata_contig7812:4035..10460+

>mRNA_H-paniculata_contig7812.15836.1 ID=mRNA_H-paniculata_contig7812.15836.1|Name=mRNA_H-paniculata_contig7812.15836.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2070bp|location=Sequence derived from alignment at H-paniculata_contig7812:4035..10460+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGGCGGTGGGGCGTCCTCCGCCGCGGGGGAACAAATGGAGGATATCAT
GGCCTACTCCGTCATGCTAGGCAGGGCGATAACCCACATGAACTTTCCAG
ATGGGCGGTGGGGCGTCCTCCGCCGCGGGGGAACAAATGGAGGATATCAT
GGCCTACTCCGTCATGCTAGGCAGGGCGATAACCCACATGAACTTTCCAG
GCATGCACAGCATCAAGGACTTCAACCTTCAGCCCAGCGAAGACAATCGT
AAGGCGCACAAGAAAAATTCAGAATCATCCGAGTCAGTTGCCAAGAGCGA
AAGCAGCGAGCCCCCCCCCCCTCTCATCCGCGCTGATCTCGTGGATTATT
TCACAGTACACGTGGATGGCGAGGTGATTATCCTTGAAGATGTCACGCGA
CAGGCATGCACAGCATCAAGGACTTCAACCTTCAGCCCAGCGAAGACAAT
CGTAAGGCGCACAAGAAAAATTCAGAATCATCCGAGTCAGTTGCCAAGAG
CGAAAGCAGCGAGCCCCCCCCCCCTCTCATCCGCGCTGATCTCGTGGATT
ATTTCACAGTACACGTGGATGGCGAGGTGATTATCCTTGAAGATGTCACG
CGACAGAACGAGGACGGATGGACGCCGCTGCACGCGTGTTGTCATAGCAA
CACAACTGCCGATATCGGCCTCAAGATTCTTGAGAACGAGGACGGATGGA
CGCCGCTGCACGCGTGTTGTCATAGCAACACAACTGCCGATATCGGCCTC
AAGATTCTTGAGGAAATGATAGCTCGCGGGGGAAATATTGACCTTAAAAC
CACGAGGGGTCCTGGCAGTTTTAATTCGGAATATACGCCACTGCACATGG
CCAGCGCGTACGGGAAATGATAGCTCGCGGGGGAAATATTGACCTTAAAA
CCACGAGGGGTCCTGGCAGTTTTAATTCGGAATATACGCCACTGCACATG
GCCAGCGCGTACGGAGTGGTAGATCTGGTGAAGGCGTTGCTCAAGGCGGG
AGCTGATCCTAACTGCAGGAACAGCCTGGACTGGAACCCCCTTCTGAGTG
GTAGATCTGGTGAAGGCGTTGCTCAAGGCGGGAGCTGATCCTAACTGCAG
GAACAGCCTGGACTGGAACCCCCTTCTGGAGGTGTGCCACCGAGGATTCA
GTGGCCTGGCTACCGCGCTCGTGCAGGCAGGGGCTGACGTTTCCCACATC
CCGTCCGAGGACGCCGGTGCCGGCGCGCATATCATGAGGGGCGCGCCGCA
ATCAGCACTTGGAGAAGCCGCGCGTGGAGGATTCAAGTCGGAGGTGTGCC
ACCGAGGATTCAGTGGCCTGGCTACCGCGCTCGTGCAGGCAGGGGCTGAC
GTTTCCCACATCCCGTCCGAGGACGCCGGTGCCGGCGCGCATATCATGAG
GGGCGCGCCGCAATCAGCACTTGGAGAAGCCGCGCGTGGAGGATTCAAGT
CGATCTGTAAGTTCCTCTTGAACTCCGGGAGCGACAAGGACCAGAAGAAC
CACCTCGGCTGGACTCCGCTGCACGAGGCCTGCTATTTCAACCACCTCGA
CACGGTGCAGCTCTTGCTGGTGCACGGGGCCGACCCGCTCGCCAAGAATA
TCTGTAAGTTCCTCTTGAACTCCGGGAGCGACAAGGACCAGAAGAACCAC
CTCGGCTGGACTCCGCTGCACGAGGCCTGCTATTTCAACCACCTCGACAC
GGTGCAGCTCTTGCTGGTGCACGGGGCCGACCCGCTCGCCAAGAATGTTC
AGGGAGCCATGCCGTACAATATGTCGAGCCTTCACGCAATCAGGGACTTG
CTGAGGGAAATTGGGGGGGAAGCTGCGGCGAAGGTTATGCCGACGCCGAC
GTTCTCCGTCTGCCTTAATGATCAGGGTCATATGTTAGTCCACATCACCG
CCGGCAAGGTTCAGGGAGCCATGCCGTACAATATGTCGAGCCTTCACGCA
ATCAGGGACTTGCTGAGGGAAATTGGGGGGGAAGCTGCGGCGAAGGTTAT
GCCGACGCCGACGTTCTCCGTCTGCCTTAATGATCAGGGTCATATGTTAG
TCCACATCACCGCCGGCAAG