prot_H-paniculata_contig78.15822.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig78.15822.1
Unique Nameprot_H-paniculata_contig78.15822.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length673
Homology
BLAST of mRNA_H-paniculata_contig78.15822.1 vs. uniprot
Match: D8LMT9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMT9_ECTSI)

HSP 1 Score: 211 bits (537), Expect = 6.180e-56
Identity = 268/621 (43.16%), Postives = 328/621 (52.82%), Query Frame = 0
Query:    5 VKMPDFTPEKWAKWLKDKEYAEDRVEHLEDELDKALDEQERLSHANEEMKVECDAEKRLRVQAESDARRAKAXXXXXXXXXXXXSRSLKLGEKQGSVVGKDGAETQELRTEIQQLKAKNHGLNTQMDALAVDHERLAGLLSTAEKDRDAAHKEAGEVRSLVASLEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDELDRLAVDSSGQQTSKGATKARQVAEERLAMSEAQVAALQTELESAREEVVTLQDAAE----------------------------MKAGAMREGXXXXXXXXXXXXXXXXXXXXXXXXXXADKEENQGPSVVGEDDEITTMRTQLK---------------------------ESEVCRTEA-QEKRAELESHLEVA---TKELSGVERRS-------------------------------------------------AEWRDKAMLLEKQLEITSGGLDEEGTKNQLLEMMTLLKDAETSKEEALEKLEARTQEVEELR-------TNAPQTNGTRSFG------------------------DGGSGAG---------VDARVAALQEELDDLHAMLDNVVSERDTAL 477
             K+PDFTPEKW KWLKDK+YAEDRVE LEDELD+ALD+QE+ +HA +E++ E DAEKRLRVQAE+DARRAKA    XXXXX   SRSLKLGEKQ    GKDG E+QELR EIQQLKAKNHGLNTQMDALA DHERLA LL TAEKD+++   EA E+R ++A L  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   GDELDRLA  +S  +  + A                  AA   +LE A + +   ++ AE                            +KAGA REG          XXXXXXXXXXXXXXXX    E    S   ++ E+++ R +                             E    R +A +EK A+ E  LE A    +E   + R+                                                  +E    +M   KQ        DEEGTK+QLLEMM+LLK+AE +K+ A ++L  + +++EEL        T++P  NGT + G                        +GG+ A          + A+VA LQ ELDD+HAMLDNV +ERD AL
Sbjct:    2 TKVPDFTPEKWDKWLKDKKYAEDRVEDLEDELDRALDDQEKAAHAADELRSERDAEKRLRVQAENDARRAKAAADQXXXXXAEASRSLKLGEKQIGGKGKDG-ESQELRVEIQQLKAKNHGLNTQMDALAADHERLASLLDTAEKDKESMGTEAAELRKVLADLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHKLGDELDRLAPSASPAKDKEAA------------------AAATAKLEVAAKSLTEAEERAETXXXXXXXXXXXXXXXXXXXDAMXXXXXLKAGAAREGVAIADAQTAKXXXXXXXXXXXXXXXXXXXAE----SASEQEGELSSARKKXXXXXXXXXXXXXQMEGXXXXXXXXXXXAEEHGVRVKALEEKVADSERRLEDAGXXVEEAENLARKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSESAAASMSAAKQ----DDHADEEGTKDQLLEMMSLLKEAEAAKQAAQDELAGKDEKIEELEAKVLASSTSSPP-NGTANTGGLHHDSGYTAEGGAARSLVGDGEAEGGAAAAEAEANGGEDLSAKVATLQAELDDMHAMLDNVSAERDAAL 594          
BLAST of mRNA_H-paniculata_contig78.15822.1 vs. uniprot
Match: A0A6H5JRF0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRF0_9PHAE)

HSP 1 Score: 151 bits (381), Expect = 1.950e-34
Identity = 164/287 (57.14%), Postives = 187/287 (65.16%), Query Frame = 0
Query:    5 VKMPDFTPEKWAKWLKDKEYAEDRVEHLEDELDKALDEQERLSHANEEMKVECDAEKRLRVQAESDARRAKAXXXXXXXXXXXXSRSLKLGEKQGSVVGKDGAETQELRTEIQQLKAKNHGLNTQMDALAVDHERLAGLLSTAEK---DRDAAHKEAGEVRSLVASLEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDELDRLAVDSS---GQQTSKGATKARQVAEERLAMSEAQVAALQTELESAREEVV------TLQDAAEMKAGAMREG 279
             K+PDFTPE+W KWLKDK+YAEDRVE LEDELD+A                           AE+DARRAKA XXXXXXXXX  SRSLKLGEKQ    GKDG E+QELR EIQQLKAKNHGLNTQMDALA DHERLA LL TAEK   D+++   EA E+R ++A    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    GDELDRLA  +S    ++ +  AT   +VA + L  +E +                       ++D AE+KAGA REG
Sbjct:    2 TKVPDFTPEQWDKWLKDKKYAEDRVEDLEDELDRAXXXXXXXXXXXXXXXXXXXXXXXXXXXAENDARRAKAAXXXXXXXXXEASRSLKLGEKQIGGKGKDG-ESQELRVEIQQLKAKNHGLNTQMDALAADHERLASLLDTAEKAFRDKESMGTEAAELRKVLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNHKLGDELDRLAPSASPSKDKEAAAAATAKLEVATKSLTEAEERAEXXXXXXXXXXXXXXXXXXAKAMRDEAELKAGAAREG 287          
BLAST of mRNA_H-paniculata_contig78.15822.1 vs. uniprot
Match: D8LMU0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMU0_ECTSI)

HSP 1 Score: 63.5 bits (153), Expect = 1.270e-8
Identity = 41/65 (63.08%), Postives = 48/65 (73.85%), Query Frame = 0
Query:  569 RQSETWRGLSSQLESEKEELSQELISAKLQVAQLSMEVDGLKLRHRQETIATALE-HAEALQHAS 632
            RQS+    L+ Q+E EKEEL+Q+LISAKLQVAQL MEVDGLKL+HRQ T   A E HA  +  AS
Sbjct:    2 RQSDKANSLAVQVEREKEELNQQLISAKLQVAQLYMEVDGLKLQHRQATAVAAREAHALGMDSAS 66          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig78.15822.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LMT9_ECTSI6.180e-5643.16Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JRF0_9PHAE1.950e-3457.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LMU0_ECTSI1.270e-863.08Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 337..371
NoneNo IPR availableCOILSCoilCoilcoord: 186..220
NoneNo IPR availableCOILSCoilCoilcoord: 553..573
NoneNo IPR availableCOILSCoilCoilcoord: 280..307
NoneNo IPR availableCOILSCoilCoilcoord: 109..136
NoneNo IPR availableCOILSCoilCoilcoord: 507..541
NoneNo IPR availableCOILSCoilCoilcoord: 578..605
NoneNo IPR availableCOILSCoilCoilcoord: 22..56
NoneNo IPR availableCOILSCoilCoilcoord: 452..472
NoneNo IPR availableCOILSCoilCoilcoord: 234..268
NoneNo IPR availableCOILSCoilCoilcoord: 399..429
NoneNo IPR availablePANTHERPTHR34491FAMILY NOT NAMEDcoord: 26..607

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig78contigH-paniculata_contig78:26877..51992 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig78.15822.1mRNA_H-paniculata_contig78.15822.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig78 25064..54181 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig78.15822.1 ID=prot_H-paniculata_contig78.15822.1|Name=mRNA_H-paniculata_contig78.15822.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=673bp
MSASVKMPDFTPEKWAKWLKDKEYAEDRVEHLEDELDKALDEQERLSHAN
EEMKVECDAEKRLRVQAESDARRAKAAADQAAAAAAAASRSLKLGEKQGS
VVGKDGAETQELRTEIQQLKAKNHGLNTQMDALAVDHERLAGLLSTAEKD
RDAAHKEAGEVRSLVASLEDQQEATSVEMQTREADLETLVAERDAAKLEA
KRLEAQNTKLGDELDRLAVDSSGQQTSKGATKARQVAEERLAMSEAQVAA
LQTELESAREEVVTLQDAAEMKAGAMREGLAAADAQAAAATEEATALRKE
LATLKADKEENQGPSVVGEDDEITTMRTQLKESEVCRTEAQEKRAELESH
LEVATKELSGVERRSAEWRDKAMLLEKQLEITSGGLDEEGTKNQLLEMMT
LLKDAETSKEEALEKLEARTQEVEELRTNAPQTNGTRSFGDGGSGAGVDA
RVAALQEELDDLHAMLDNVVSERDTALNDLRRAGGGGAGDDDTAKDGDET
TSKAAALATAQEELSTAREETEILRQDCDDLREKVMALQNEQDEGLNPDD
KRVRILEDQVERLSQEHTRQSETWRGLSSQLESEKEELSQELISAKLQVA
QLSMEVDGLKLRHRQETIATALEHAEALQHASSPTSSQVSTMSRSTTTTP
TSNPPASPQSSDLSSSPQTLEL*
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