prot_H-paniculata_contig778.15806.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig778.15806.1
Unique Nameprot_H-paniculata_contig778.15806.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length561
Homology
BLAST of mRNA_H-paniculata_contig778.15806.1 vs. uniprot
Match: D8LNZ8_ECTSI (60S ribosomal export protein NMD3 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNZ8_ECTSI)

HSP 1 Score: 888 bits (2294), Expect = 0.000e+0
Identity = 464/561 (82.71%), Postives = 495/561 (88.24%), Query Frame = 0
Query:   13 PTDGLAAPPAPEPEKKMPTVLCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLTIHQCRGCQRYLRPPWVEAKLETRELMAVCLRKIMGLKKVKLVDAAWIWTEPHSRRLKLKLTVQKEVGNGAVLQQAMVVTFVVRNQQCDDCAAAFTNNTWTAVVQVRQRVDHKRTFFYLEQLILKHNAHSQCTNIQTFKDGMDFYFTERSHSARFVDFLEGVVPTKVKHSKKLVSADNHSNIFNFHYTYLVTLVPVCKDDLVLLPKRLAEQLGNIDRLVLAQRISSAVQFVDPRTAQTADVTEEKYWRHEFPALLSSTRLIRYVVLNTEPLPEKARPSAPR-GHRIRKARIAEVELARDCDLGHNDNRVHAISHLGHILRAGDTVLGYDVPTANLPAGEASS-LVESLPDVVLVRKVYPRNRDDEKESRSNDRHWKLRELETDGGGDGGAGS-NAARDEAAAEKDREHFLQQLESDRDMRRQVNLYKAGAAAPTASG---------EEVDEEEIGLDELLDGMNLDDPDAGPDEEEDVGAA-VSIFEAGAAPAPNADLSLDDDPDL 560
            PTDGLAAPP PEPEK+MPT+LCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLT+HQCRGCQRYLRP WVE KLE+RELMAVCLRKI GLKKVKLVDA+WIWTEPHSRRLK+KLTVQKEVGNGAVLQQAMVVTFVVRNQQCD CAAAFT+NTWTAVVQVRQRVDHKRTFFYLEQLILKHNAHSQCTNIQTFKDGMDFYFTE+SHSARFVDFLEGVVPTKVKHSKKLVSADNHSNIFNFHYTYLVTLVPVCKDDLVLLPKRLAE LGNI RL +AQRI+SAVQFVDP TAQTADVTEEKYWR+EFP+LLSSTRL+ YVVL TEPLPEKARPSAPR GHRIRKAR+AEVELAR+CDLG ND+RV A+SHLGHILRAGDTVL YDV +ANLP GEA+  L   LPDVVLVRKVYPR+  D +     DRHWKL ELE DGG        +  RDEAAAEKD E FLQQLESD+DMRRQVNLYK G AA  A+          EE+DEEE+ LDELLD M LD+ +AGPD EED+GAA  SIFEAGAAPAPNA+L LDDDP+L
Sbjct:    7 PTDGLAAPPPPEPEKQMPTILCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLTMHQCRGCQRYLRPGWVECKLESRELMAVCLRKISGLKKVKLVDASWIWTEPHSRRLKVKLTVQKEVGNGAVLQQAMVVTFVVRNQQCDTCAAAFTDNTWTAVVQVRQRVDHKRTFFYLEQLILKHNAHSQCTNIQTFKDGMDFYFTEKSHSARFVDFLEGVVPTKVKHSKKLVSADNHSNIFNFHYTYLVTLVPVCKDDLVLLPKRLAESLGNISRLAVAQRITSAVQFVDPLTAQTADVTEEKYWRYEFPSLLSSTRLVPYVVLGTEPLPEKARPSAPRRGHRIRKARVAEVELARECDLGRNDDRVTAVSHLGHILRAGDTVLAYDVSSANLPEGEATGDLKGRLPDVVLVRKVYPRH--DREGGGKADRHWKLGELEKDGGDXXXXXXVSEKRDEAAAEKDYERFLQQLESDKDMRRQVNLYKQGLAAKPAAADGDGAMEDVEEMDEEEVRLDELLDAMTLDNANAGPDGEEDLGAASASIFEAGAAPAPNAELLLDDDPEL 565          
BLAST of mRNA_H-paniculata_contig778.15806.1 vs. uniprot
Match: A0A835ZB23_9STRA (60S ribosomal export protein NMD3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB23_9STRA)

HSP 1 Score: 642 bits (1655), Expect = 3.950e-225
Identity = 336/546 (61.54%), Postives = 404/546 (73.99%), Query Frame = 0
Query:   21 PAPEPEKKMPTVLCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLTIHQCRGCQRYLRPPWVEAKLETRELMAVCLRKIMGLKKVKLVDAAWIWTEPHSRRLKLKLTVQKEVGNGAVLQQAMVVTFVVRNQQCDDCAAAFTNNTWTAVVQVRQRVDHKRTFFYLEQLILKHNAHSQCTNIQTFKDGMDFYFTERSHSARFVDFLEGVVPTKVKHSKKLVSADNHSNIFNFHYTYLVTLVPVCKDDLVLLPKRLAEQLGNIDRLVLAQRISSAVQFVDPRTAQTADVTEEKYWRHEFPALLSSTRLIRYVVLNTEPLPEKARPSAPRGHRIRKARIAEVELARDCDLGHNDNRVHAISHLGHILRAGDTVLGYDVPTANLPAGEASSLVESLPDVVLVRKVYPRNRDDEKESRSNDRHWKLRELETDGGGDGGAGSNAARDEAAAEKDREHFLQQLESDRDMRRQVNLYK---AGAAAPTASGE---EVDEEEIGLDELLDGMNLDDPDAGPDEEEDVGAAVSIFEAGAAPAPN-ADLSLDDDPD 559
            P P    ++ TV CC+CS PI PNPT MCV CIRTQVDITEGIA   TI QCRGC R+L+P WVEA LE+RELMA+CLRK+ GL +VKLVDA+W+WTE HSRRLKLKLTVQKEV NGA+LQQA++V F VRNQQC +C A++TNNTW AVVQ+RQRVDHKRTFFYLEQLILKHNAH    N+QT KDGMDF++ ER+ +AR + FLE V+P ++K+SKKL+SADNHSN +NFHYTYLVT+ PVCKDDLVLLP RLAE LG   RL + QRIS+ +  VDP TAQTADV  + Y RHEF ALLSSTRL+ +VVL  EPLP  + P+  +G R+R+AR+AEV +AR+CDLG ND +  AISHLGH+L+AGDTVLGYDV +ANLP      L  +LPDVVLVRKVY         S +  R W+L  LE D          + RD  A + D E F+QQLE+D++MRRQVNL+K    GAAA T   +   EVDEE+I ++ELLD M LDDPDA PD+ +       +F AG AP  N A L+LDD+ D
Sbjct:    8 PPPSALPELATVACCICSAPIKPNPTHMCVQCIRTQVDITEGIALKPTIFQCRGCMRWLKPNWVEATLESRELMAICLRKVSGLNRVKLVDASWVWTEAHSRRLKLKLTVQKEVQNGAILQQALIVEFTVRNQQCTECQASYTNNTWKAVVQIRQRVDHKRTFFYLEQLILKHNAHVNAINVQTHKDGMDFFYAERNQAARMLSFLESVIPCRIKNSKKLISADNHSNTYNFHYTYLVTVAPVCKDDLVLLPARLAETLGQFARLAVVQRISNGIALVDPVTAQTADVNVDHYARHEFVALLSSTRLVPFVVLGLEPLPLPSAPTMAQGRRMRRARLAEVTVARECDLGANDTQFTAISHLGHLLKAGDTVLGYDVASANLPEDHLRGLKTALPDVVLVRKVYT--------SGAGKRAWRLEALEKDR-----EAELSKRDADAHDADYERFMQQLEADKEMRRQVNLFKDLAIGAAAKTGGSDDDNEVDEEQIRVEELLDDMRLDDPDAAPDDGD-----AQVFSAGEAPGVNFAALALDDEDD 535          
BLAST of mRNA_H-paniculata_contig778.15806.1 vs. uniprot
Match: A0A7S2WJE1_9STRA (60S ribosomal export protein NMD3 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WJE1_9STRA)

HSP 1 Score: 514 bits (1323), Expect = 2.110e-174
Identity = 267/511 (52.25%), Postives = 350/511 (68.49%), Query Frame = 0
Query:   31 TVLCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLTIHQCRGCQRYLRPPWVEAKLETRELMAVCLRKIMGLKKVKLVDAAWIWTEPHSRRLKLKLTVQKEVGNGAVLQQAMVVTFVVRNQQCDDCAAAFTNNTWTAVVQVRQRVDHKRTFFYLEQLILKHNAHSQCTNIQTFKDGMDFYFTERSHSARFVDFLEGVVPTKVKHSKKLVSADNHSNIFNFHYTYLVTLVPVCKDDLVLLPKRLAEQLGNIDRLVLAQRISSAVQFVDPRTAQTADVTEEKYWR------HEFPALLSSTRLIRYVVLNTEPLPEKARPSAPRGHRIRKARIAEVELARDCDLGHNDNRVHAISHLGHILRAGDTVLGYDVPTANLPAGEASSLVE--SLPDVVLVRKVYPRNRDDEKESRSNDRHWKLRELETDGGGDGGAGSNAARDEAAAEKDREHFLQQLESDRDMRRQVNLY-------KAGAAA--PTASGE----EVDEEEIGLDELLDGMNL 520
            TVLCC C  PI  NP+ MC  C+  + DITEGIAT L++H+CRGC+R+LRP WV A+LE++ELMA+CLRKI GL KV LVDA WIWTEPHS RLK+K+T+QKEV  GA+LQQ+ VV FV+RNQQC+DC   +T+ TW AVVQVRQRVDHKRTF+YLEQL+LKHN HS+C +IQ+F+DGMDFYF E++ + RF DFL+G +P ++K++KKL+S+DNHSNIFNF +T+L  ++P+CKDDL +LP RLA+ L +I  LVL +R++  V  VDP T   A    + Y +        F  ++S+ RLI Y+VL  EP+    R  A       K R+A VE+AR  DLG ND + H +SHLGHILR GDTVLGYDV  ANL   + + + +  +LP+VVLVRK+Y           S  R W LR+LE D   +    +    D  +   D E F+QQLE D++MR+ VNLY       KA AAA  P    E    E+DEE++ +DELL+G+++
Sbjct:   18 TVLCCQCGNPIAANPSMMCAHCLSVRSDITEGIATQLSVHRCRGCERWLRPSWVTAELESKELMALCLRKIKGLSKVNLVDAQWIWTEPHSMRLKIKVTIQKEVDGGAILQQSFVVEFVIRNQQCEDCQKQYTDGTWKAVVQVRQRVDHKRTFYYLEQLLLKHNVHSRCISIQSFRDGMDFYFAEKNEAVRFTDFLQGNIPVRIKNTKKLISSDNHSNIFNFKFTFLCIIIPLCKDDLTVLPVRLAKTLSDISPLVLVERVTRLVHLVDPLTCDRATFDSDHYGKLTSGVESSFGGIMSAPRLIEYIVLGIEPILASERAGAASKVFKSKTRLAHVEVARASDLGVNDTKFHTVSHLGHILRTGDTVLGYDVSAANLDDADVARIEKRRALPEVVLVRKLYG--------VESQRRGWTLRKLEYDAVEEP-TRTRKKDDMESDSADYERFIQQLEGDKEMRKHVNLYRREAGPRKAAAAAVDPLEEDEGEEDEMDEEQVHIDELLEGLDI 519          
BLAST of mRNA_H-paniculata_contig778.15806.1 vs. uniprot
Match: T0RPV6_SAPDV (60S ribosomal export protein NMD3 n=4 Tax=Saprolegniaceae TaxID=4764 RepID=T0RPV6_SAPDV)

HSP 1 Score: 511 bits (1317), Expect = 3.490e-174
Identity = 266/534 (49.81%), Postives = 358/534 (67.04%), Query Frame = 0
Query:   25 PEKKMPTVLCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLTIHQCRGCQRYLRPPWVEAKLETRELMAVCLRKIMGLKKVKLVDAAWIWTEPHSRRLKLKLTVQKEVGNGAVLQQAMVVTFVVRNQQCDDCAAAFTNNTWTAVVQVRQRVDHKRTFFYLEQLILKHNAHSQCTNIQTFKDGMDFYFTERSHSARFVDFLEGVVPTKVKHSKKLVSADNHSNIFNFHYTYLVTLVPVCKDDLVLLPKRLAEQLGNIDRLVLAQRISSAVQFVDPRTAQTADVTEEKYWRHEFPALLSSTRLIRYVVLNTEPLPEKARPSAPRGHRIRKARIAEVELARDCDLGHNDNRVHAISHLGHILRAGDTVLGYDVPTANLPAGEASSLVES---LPDVVLVRKVYPRNRDDEKESRSNDRHWKLRELETDGGGDGGAGSNAARDEAAAEKDREHFLQQLESDRDMRRQVNLYKAGAAAPTASGEEVDEEE----IGLDELLDGMNLDDPDAGPDEEEDVGAAVSIFEAGAAPAPNAD 551
            PE+ +P +LCCMC++PI  N  +MCV C++ QVD+TEGI   + +HQCRGC ++ RPPWV A+LE+REL+A+CL+KI GL KVKLVDA W+WTEPHS+RLKLKLTVQKEV NGA+LQQ+ VVTF+VRNQQCD+C A+FTNN+W AVVQVRQ+VDHKRTFFYLEQLILKH  H + ++I++  DG+DF+F ER+H+ RFVDFL   VP K+K +KKL+SADNHSN  N+ +TY V L  VCKDDLV LP +LA QLGNI  L +  +++S++  +DP T Q A++  +KYWR+ F AL SS +L+ Y VL++ PL        P     RK R+AE+E+ R+ D G ND R    +HLG +L  GDT +GYD+ T+     +   L E+   LPDV+LVRK + R        +   R+WKL+ +E    G   A      ++   E D +HFL +LE D++MR ++N+YK          +  D++E    I ++ELLD M +        EE +V   +SI EA A+   N D
Sbjct:    5 PEQSLPNILCCMCAVPIKANAANMCVSCLKGQVDVTEGIPKEIIMHQCRGCLKWSRPPWVAAELESRELLAICLKKISGLNKVKLVDAGWVWTEPHSKRLKLKLTVQKEVMNGAILQQSFVVTFIVRNQQCDECQASFTNNSWKAVVQVRQKVDHKRTFFYLEQLILKHRVHEKTSSIESHPDGVDFFFVERNHALRFVDFLSETVPIKLKTAKKLISADNHSNTANYKFTYAVDLATVCKDDLVALPLKLARQLGNISSLCIVTQVTSSIHVIDPFTMQRAEIDNDKYWRYPFKALRSSKQLVEYTVLDSNPLQIPTLGGVP-VRTNRKTRLAEMEIVRNSDFGVNDTRFQTTTHLGMLLNVGDTAMGYDLSTSVFNDSDTKPLDEAGITLPDVILVRKQFLRR------VQKRSRNWKLKNIE----GIESAVPVKKAEQTKTEMDYQHFLDELEDDKEMRSKINIYKVDDDKAGDDQDMEDDDEGTGVIPVEELLDDMKI--------EENEV-EILSITEANASHGLNVD 518          
BLAST of mRNA_H-paniculata_contig778.15806.1 vs. uniprot
Match: A0A6G0XWA3_9STRA (60S ribosomal export protein NMD3 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XWA3_9STRA)

HSP 1 Score: 511 bits (1315), Expect = 7.010e-174
Identity = 262/510 (51.37%), Postives = 348/510 (68.24%), Query Frame = 0
Query:   26 EKKMPTVLCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLTIHQCRGCQRYLRPPWVEAKLETRELMAVCLRKIMGLKKVKLVDAAWIWTEPHSRRLKLKLTVQKEVGNGAVLQQAMVVTFVVRNQQCDDCAAAFTNNTWTAVVQVRQRVDHKRTFFYLEQLILKHNAHSQCTNIQTFKDGMDFYFTERSHSARFVDFLEGVVPTKVKHSKKLVSADNHSNIFNFHYTYLVTLVPVCKDDLVLLPKRLAEQLGNIDRLVLAQRISSAVQFVDPRTAQTADVTEEKYWRHEFPALLSSTRLIRYVVLNTEPLPEKARPSAPRGHRIRKARIAEVELARDCDLGHNDNRVHAISHLGHILRAGDTVLGYDVPTANLPAGEASSLVES---LPDVVLVRKVYPRNRDDEKESRSNDRHWKLRELETDGGGDGGAGSNAARDEAAA-EKDREHFLQQLESDRDMRRQVNLYK-----AGAAAPTASGEEVDEEEIGLDELLDGMNLDDPDAG 526
            E  +P +LCC+C++PI  N  +MCV C++ QVD+TEGI   + +HQCRGC ++ RP WV A+LE+REL+A+CL+KI GL KVKLVDA WIWTEPHS+RLKLKLTVQKEV NGA+LQQ+ +VTF+VRNQQCD+C A+FTN++W AVVQVRQ+V+HKRTFFYLEQLILKH  H + TNI++  DG+DF+F ER+H+ RFVDFL+  VP  +K +KKL+SADNHSN  N+ +TY V + PVCKDDLV LP +LA QLGNI  L L  +++S++  +DP T Q A++  EKYWR+ F AL SS +L  Y VL++ P+    +   P     RK R+AE+E+ R+ D G ND R   +SHLG +L  GDT +GYD+ T+     +   L E+   LPDVVLVRK + R        +   R WKL+ +E       G  S   +D+    + D EHFL  LE D++MR ++N+YK            AS E+ D  +I LDELLD M ++D + G
Sbjct:    5 EHSLPDILCCICAVPIKANAANMCVSCLKGQVDVTEGIPKEIIMHQCRGCLKWSRPQWVSAELESRELLAICLKKITGLNKVKLVDAGWIWTEPHSKRLKLKLTVQKEVMNGAILQQSFIVTFIVRNQQCDECQASFTNHSWKAVVQVRQKVEHKRTFFYLEQLILKHRVHEKTTNIESQPDGVDFFFVERNHALRFVDFLQETVPISLKTAKKLISADNHSNTANYKFTYAVDIAPVCKDDLVALPLKLARQLGNISSLCLVTQVTSSIHVIDPFTMQRAEIENEKYWRYPFKALRSSKQLTEYTVLDSTPMEIPMKGGVP-VRTNRKTRLAELEIVRNSDFGVNDTRFQTVSHLGMLLNVGDTAMGYDLVTSVFNDADTKPLDEAGITLPDVVLVRKQFLRR------VQKRQRKWKLKTIE-------GIESMGKKDDPTKHDLDYEHFLNDLEQDKEMRSRINIYKNDEXXXXXXXXXASMEDGDGGDIPLDELLDDMTMEDQENG 500          
BLAST of mRNA_H-paniculata_contig778.15806.1 vs. uniprot
Match: D0MSQ0_PHYIT (60S ribosomal export protein NMD3 n=18 Tax=Peronosporaceae TaxID=4777 RepID=D0MSQ0_PHYIT)

HSP 1 Score: 508 bits (1309), Expect = 6.490e-173
Identity = 269/512 (52.54%), Postives = 353/512 (68.95%), Query Frame = 0
Query:   28 KMPTVLCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLTIHQCRGCQRYLRPPWVEAKLETRELMAVCLRKIMGLKKVKLVDAAWIWTEPHSRRLKLKLTVQKEVGNGAVLQQAMVVTFVVRNQQCDDCAAAFTNNTWTAVVQVRQRVDHKRTFFYLEQLILKHNAHSQCTNIQTFKDGMDFYFTERSHSARFVDFLEGVVPTKVKHSKKLVSADNHSNIFNFHYTYLVTLVPVCKDDLVLLPKRLAEQLGNIDRLVLAQRISSAVQFVDPRTAQTADVTEEKYWRHEFPALLSSTRLIRYVVLNTEPLPEKARPSAP-RGHRI-RKARIAEVELARDCDLGHNDNRVHAISHLGHILRAGDTVLGYDVPTANLPAGEASSLVES---LPDVVLVRKVYPRNRDDEKESRSNDRHWKLRELETDGGGDGGAGSNAARDEAAAEKDREHFLQQLESDRDMRRQVNLYK--AGAAAPTASGEEVDEEEIG-----LDELLDGMNLDDPDAGP 527
            +MPT+LCCMC+ PI  N  + CV C+++QVD+TEGI   + IHQCRGC R+ RPPWV A+LE+REL+A+CL+KI  L +VKL+DA WIWTEPHSRRLKLKLTVQKEV +  ++QQ+ VVTFVVRNQQCD C A+F N +W AVVQVRQRVDHKRTFF+LEQLILKH AH + TNI++  DG+DF+F+ER+H+ RFVDFL+  VP KVK +KKL+SADNHSN  N+ +TY V + PVCKDDLVLLP +LA  LGN+  L L Q ++S++  VDP T Q A+V  EKYWR+ F AL S   +    VL++ P+   A PS   R  R+ RK R+A++E+ RD D G ND R   +SHLG +L  GD+  GYD+ +A     +   LV+S   LPDVVLV+K++PR        +   R+WKL+++E    G   AG     D +  E+D E F+ +LE D++MR Q+NLYK     A P    + +DE+++G     L ELLD + + D D  P
Sbjct:    7 QMPTILCCMCATPIVANAANTCVSCLKSQVDVTEGIPKEVIIHQCRGCMRWSRPPWVAAELESRELLAMCLKKINNLNRVKLIDANWIWTEPHSRRLKLKLTVQKEVLSKMIMQQSFVVTFVVRNQQCDACQASFANQSWRAVVQVRQRVDHKRTFFFLEQLILKHRAHEKTTNIESHPDGVDFFFSERNHALRFVDFLQESVPMKVKTAKKLISADNHSNTHNYKFTYAVEIAPVCKDDLVLLPVKLARMLGNMSCLCLVQSVTSSIHVVDPFTTQVAEVDSEKYWRYPFRALRSIKAMTDLTVLDSNPM---AIPSGGGRAIRVTRKTRLADMEVVRDADFGVNDTRFRTVSHLGMLLHVGDSARGYDLTSAVFNDADLVPLVQSGLTLPDVVLVKKMFPRR------IQKRARNWKLKKME----GVEQAGPVRKADLSKEEQDYEQFMDELEEDKEMRSQINLYKDETKPAQPAEDDDAMDEDDVGAPAVELHELLDDLAMKDDDPTP 505          
BLAST of mRNA_H-paniculata_contig778.15806.1 vs. uniprot
Match: A0A024UHG0_9STRA (60S ribosomal export protein NMD3 n=7 Tax=Aphanomyces TaxID=100860 RepID=A0A024UHG0_9STRA)

HSP 1 Score: 504 bits (1298), Expect = 2.990e-171
Identity = 260/512 (50.78%), Postives = 345/512 (67.38%), Query Frame = 0
Query:   25 PEKKMPTVLCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLTIHQCRGCQRYLRPPWVEAKLETRELMAVCLRKIMGLKKVKLVDAAWIWTEPHSRRLKLKLTVQKEVGNGAVLQQAMVVTFVVRNQQCDDCAAAFTNNTWTAVVQVRQRVDHKRTFFYLEQLILKHNAHSQCTNIQTFKDGMDFYFTERSHSARFVDFLEGVVPTKVKHSKKLVSADNHSNIFNFHYTYLVTLVPVCKDDLVLLPKRLAEQLGNIDRLVLAQRISSAVQFVDPRTAQTADVTEEKYWRHEFPALLSSTRLIRYVVLNTEPLPEKARPSAPRGHRIRKARIAEVELARDCDLGHNDNRVHAISHLGHILRAGDTVLGYDVPTANLPAGEASSLVE---SLPDVVLVRKVYPRNRDDEKESRSNDRHWKLRELETDGGGDGGAGSNAARDEAAAEKDREHFLQQLESDRDMRRQVNLYKAGAAAPTASGEEVDEEE------------IGLDELLDGMNLD 521
            PE ++P +LCC+C++PI  N  +MCV C++ QVD+TEGI   + +HQCRGC ++ RP WV A LE+REL+A+CL+KI GL KVKLVDA WIWTEPHS+RLKLKLTVQKEV NGA+LQQ+ +VTF+VRNQQCDDC A+FTN++W AVVQVRQ+V+HKRTFF+LEQLILKH  H + T+I++  DG+DF+F ER+H+ RFVDFL+  VP  +K +KKL+SADNHSN  N+ +TY V + PVCKDDLV LP +LA QLGNI  L L  +++S++  +DP T Q A++  +KYWR+ F AL SS +L  Y VL++ PL    +   P     RK R+A+V++ R+ D G ND R H ++HLG +L  GDT +GYD+ T+     +   L E   SLPDVVLVRK + R        +   R WKL+ +E    G          D+   + D EHFL  LE D+DMR ++N+YKA        G + D+              I LDELLD +N+D
Sbjct:    5 PEHELPDILCCICAVPIKANAANMCVSCLKGQVDVTEGIPKEIIMHQCRGCLKWSRPQWVSADLESRELLAICLKKITGLNKVKLVDAGWIWTEPHSKRLKLKLTVQKEVMNGAILQQSFIVTFIVRNQQCDDCQASFTNHSWKAVVQVRQKVEHKRTFFFLEQLILKHRVHEKTTSIESQPDGVDFFFVERNHALRFVDFLQETVPISLKTAKKLISADNHSNTANYKFTYAVDIAPVCKDDLVALPLKLARQLGNISSLCLVTQVTSSIHVIDPFTMQRAEIDNDKYWRYPFKALRSSKQLTEYTVLDSSPLEISTKGGIP-VRTNRKTRLADVDIVRNSDFGVNDMRFHTVTHLGMLLNVGDTAMGYDLSTSVFNDLDTKPLDEAGISLPDVVLVRKQFLRR------VQKRSRKWKLKTIE----GIEPTMPLKKADQTKHDLDYEHFLNDLEEDKDMRSRINIYKA------TDGNDHDDXXXXXXXXXXXXGAIPLDELLDDLNMD 499          
BLAST of mRNA_H-paniculata_contig778.15806.1 vs. uniprot
Match: W2I7I2_PHYPR (60S ribosomal export protein NMD3 n=9 Tax=Peronosporaceae TaxID=4777 RepID=W2I7I2_PHYPR)

HSP 1 Score: 504 bits (1297), Expect = 3.950e-171
Identity = 264/504 (52.38%), Postives = 351/504 (69.64%), Query Frame = 0
Query:   28 KMPTVLCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLTIHQCRGCQRYLRPPWVEAKLETRELMAVCLRKIMGLKKVKLVDAAWIWTEPHSRRLKLKLTVQKEVGNGAVLQQAMVVTFVVRNQQCDDCAAAFTNNTWTAVVQVRQRVDHKRTFFYLEQLILKHNAHSQCTNIQTFKDGMDFYFTERSHSARFVDFLEGVVPTKVKHSKKLVSADNHSNIFNFHYTYLVTLVPVCKDDLVLLPKRLAEQLGNIDRLVLAQRISSAVQFVDPRTAQTADVTEEKYWRHEFPALLSSTRLIRYVVLNTEPLPEKARPSAP-RGHRI-RKARIAEVELARDCDLGHNDNRVHAISHLGHILRAGDTVLGYDVPTANLPAGEASSLVES---LPDVVLVRKVYPRNRDDEKESRSNDRHWKLRELETDGGGDGGAGSNAARDEAAAEKDREHFLQQLESDRDMRRQVNLYKAGAA-APTASGEEVDEEEIG-----LDELLDGMNL 520
            +MPT+LCCMC+ PI  N  + CV C+++QVD+TEGI   + IHQCRGC R+ RPPWV A+LE+REL+A+CL+KI  L +VKL+DA WIWTEPHSRRLKLKLTVQKEV +  ++QQ+ VVTFVVRNQQCD C A+F N +W AVVQVRQRVDHKRTFF+LEQLILKH AH + TNI++  DG+DF+F+ER+H+ RFVDFL+  VP KVK +KKL+SADNHSN  N+ +TY V + PVCKDDLVLLP +LA  LGN+  L L Q ++S++  VDP T Q A++  EKYWR+ F AL S   +  + VL++ P+   A PS   R  R+ RK R+A++E+ RD D G ND R   +SHLG +L  GD+  GYD+ +A     +   LV+S   LPDVVLV+K++PR        +   R+WKL+++E    G   AG     D +  E+D E FL +LE D+++R Q+NLYK     A  A  + ++E+++G     L ELLD + +
Sbjct:    7 QMPTILCCMCATPIVANAANTCVSCLKSQVDVTEGIPKEVIIHQCRGCMRWSRPPWVAAELESRELLAMCLKKINNLNRVKLIDANWIWTEPHSRRLKLKLTVQKEVMSKMIMQQSFVVTFVVRNQQCDACQASFANQSWRAVVQVRQRVDHKRTFFFLEQLILKHRAHEKTTNIESHPDGVDFFFSERNHALRFVDFLQESVPMKVKTAKKLISADNHSNTHNYKFTYAVEIAPVCKDDLVLLPVKLARMLGNMSCLCLVQSVTSSIHVVDPFTTQVAEIDSEKYWRYPFRALRSIKAMTDFTVLDSNPM---AIPSGGGRAIRVTRKTRLADMEVVRDADFGVNDTRFRTVSHLGMLLHVGDSARGYDLTSAVFNDADLVPLVQSGMTLPDVVLVKKMFPRR------IQKRARNWKLKKME----GVEQAGPVRKTDLSKEEQDYEQFLDELEEDKELRSQINLYKDDTKPAKPADDDAMEEDDVGAPAVELHELLDDLAM 497          
BLAST of mRNA_H-paniculata_contig778.15806.1 vs. uniprot
Match: A0A485KPH2_9STRA (60S ribosomal export protein NMD3 n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KPH2_9STRA)

HSP 1 Score: 502 bits (1293), Expect = 1.700e-170
Identity = 256/510 (50.20%), Postives = 343/510 (67.25%), Query Frame = 0
Query:   26 EKKMPTVLCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLTIHQCRGCQRYLRPPWVEAKLETRELMAVCLRKIMGLKKVKLVDAAWIWTEPHSRRLKLKLTVQKEVGNGAVLQQAMVVTFVVRNQQCDDCAAAFTNNTWTAVVQVRQRVDHKRTFFYLEQLILKHNAHSQCTNIQTFKDGMDFYFTERSHSARFVDFLEGVVPTKVKHSKKLVSADNHSNIFNFHYTYLVTLVPVCKDDLVLLPKRLAEQLGNIDRLVLAQRISSAVQFVDPRTAQTADVTEEKYWRHEFPALLSSTRLIRYVVLNTEPLPEKARPSAPRGHRIRKARIAEVELARDCDLGHNDNRVHAISHLGHILRAGDTVLGYDVPTANLPAGEASSLVES---LPDVVLVRKVYPRNRDDEKESRSNDRHWKLRELETDGGGDGGAGSNAARDEAAAEKDREHFLQQLESDRDMRRQVNLYKAGA--------AAPTASGEEVDEEEIGLDELLDGMNLDDPD 524
            E  +P +LCC+C++PI  N  +MCV C++ QVD+TEGI   + IHQCRGC ++ RPPWV A LE+REL+A+CL+KI GL KVKLVDA WIWTEPHS+RLKLKLTVQKEV NGA+LQQ+ +VTF+VRNQQCD+C A+FTN++W AVVQVRQ+V+HKRTFF+LEQLILKH  H + T+I++  DG+DF+F ER+H+ RFVDFL+  VP  +K +KKL+SADNHSN  N+ +TY+V + PVCKDDLV LP +LA QLGNI  L L  +++S++  +DP T Q A++  +KYWR  F AL SS +L  Y VL++ P+    +   P     RK R+AE+E+ R+ D G ND R   +SHLG +L  GDT +GYD+ T+     +   L E+   LPDV+LVRK + R        +   R WKL+ +E    G   A      D+   + D EHFL  LE D++MR ++N+YK                  ++     I L+ELLD MN+D+ D
Sbjct:    6 EHDLPNILCCICAVPIKANAANMCVSCLKGQVDVTEGIPKEIIIHQCRGCLKWSRPPWVSADLESRELLAICLKKITGLNKVKLVDAGWIWTEPHSKRLKLKLTVQKEVMNGAILQQSFIVTFIVRNQQCDECQASFTNHSWKAVVQVRQKVEHKRTFFFLEQLILKHRVHEKTTSIESQPDGVDFFFVERNHALRFVDFLQETVPISLKTAKKLISADNHSNTANYKFTYMVDIAPVCKDDLVALPLKLARQLGNISSLCLVTQVTSSIHVIDPFTMQRAEIDNDKYWRSPFKALCSSKKLTEYTVLDSTPMEIPVKGGVP-VRTNRKTRLAELEVVRNVDFGVNDTRFQTVSHLGMLLNVGDTAMGYDLSTSVFNDLDTKPLDEAGITLPDVILVRKQFLRR------VQKRSRKWKLKTIE----GIEPAVPLKKADQTKQDLDYEHFLNDLEEDKEMRAKINIYKVDQDDXXXXXXXXXXXXXDDRGASSIPLEELLDDMNMDEAD 504          
BLAST of mRNA_H-paniculata_contig778.15806.1 vs. uniprot
Match: A0A7S2AZN0_9STRA (60S ribosomal export protein NMD3 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AZN0_9STRA)

HSP 1 Score: 501 bits (1289), Expect = 5.410e-170
Identity = 272/521 (52.21%), Postives = 360/521 (69.10%), Query Frame = 0
Query:   48 MCVLCIRTQVDITEGIATNLTIHQCRGCQRYLRPPWVEAKLETRELMAVCLRKIMGLKKVKLVDAAWIWTEPHSRRLKLKLTVQKEVGNGAVLQQAMVVTFVVRNQQCDDCAAAFTNNTWTAVVQVRQRVDHKRTFFYLEQLILKHNAHSQCTNIQTFKDGMDFYFTERSHSARFVDFLEGVVPTKVKHSKKLVSADNHSNIFNFHYTYLVTLVPVCKDDLVLLPKRLAEQLGNIDRLVLAQRISSAVQFVDPRTAQTADVTEEKYWR-HEFPALLSSTRLIRYVVLNTEPLP-EKARPSAPRGHRIRKARIAEVELARDCDLGHNDNRVHAISHLGHILRAGDTVLGYDVPTANLPAGEASSLVE-----SLPDVVLVRKVYPRNRDDEKESRSNDRHWKLRELET-DGGGDGGAGSNAARDEAAAEKDREHFLQQLESDRDMRRQVNLYKA-------GAAAPTASGEEVDEEEIGLDELLDGMNLDDPDAGPDEEEDVGAAVSIFEAGAAPAPNADLS 553
            MC  C+++ VDIT+GI T L++++CRGCQ++L+P W+EA LE+ EL+A+CL+KI GL KVKLVDA+W+WTEPHS RLK+KL +QKEV N AVLQQA VV +V+RNQQC DC   +T   W AVVQVRQRVDHKRTF+YLEQL+LKH  H+ C +IQTF+DGMDFYF ER+ + RF DFL+ VVP ++K++KKL+S+DNHSN+FN+ +T+L  + P+CKDDLV+LPK LA  LGNI  LVL +R+S+ +  VDP T Q A    E +++   F A+LS+ RL+ YVVL TE L  ++   S P   + RK R+ EVELAR  DLG ND R+  +SHLGH+LRAGDTVLGYD+    L + +  ++ +     +LPD  LVRK+Y      + E+ +  R WKL+EL   +   +GG G+     E  A KD E F+QQLE DR+MRRQVNL+KA         A  T    E+DE+EI + ELL+ + LDD    P + ED+    +   A AA + NADLS
Sbjct:    1 MCAQCLKSAVDITDGIPTQLSVYRCRGCQKWLKPGWIEADLESGELLALCLKKIRGLNKVKLVDASWVWTEPHSMRLKIKLNIQKEVMNAAVLQQAFVVEYVIRNQQCSDCQKQYTGGVWKAVVQVRQRVDHKRTFYYLEQLLLKHGVHTNCLSIQTFRDGMDFYFAERNQAVRFTDFLQTVVPIRMKNTKKLISSDNHSNLFNYKFTHLGVIAPLCKDDLVVLPKALALTLGNISPLVLIERVSTFIHLVDPFTCQRASFDIEHFYKVGAFGAVLSAARLVEYVVLGTEDLILDERESSTPTPTQKRKKRLVEVELARSADLGVNDTRLTCVSHLGHLLRAGDTVLGYDLERGALHSLDRETMAQVEKRRALPDSALVRKLYGVGSGGDGET-TKSRRWKLKELAVQEEERNGGKGA-----EDVAMKDYEQFMQQLEGDREMRRQVNLFKATDDDQDMDTAVATDDACEMDEQEIRIGELLEDLGLDDET--PADPEDMAFLAADAMANAAGS-NADLS 512          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig778.15806.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNZ8_ECTSI0.000e+082.7160S ribosomal export protein NMD3 n=2 Tax=Ectocarp... [more]
A0A835ZB23_9STRA3.950e-22561.5460S ribosomal export protein NMD3 n=1 Tax=Tribonem... [more]
A0A7S2WJE1_9STRA2.110e-17452.2560S ribosomal export protein NMD3 n=1 Tax=Rhizochr... [more]
T0RPV6_SAPDV3.490e-17449.8160S ribosomal export protein NMD3 n=4 Tax=Saproleg... [more]
A0A6G0XWA3_9STRA7.010e-17451.3760S ribosomal export protein NMD3 n=1 Tax=Aphanomy... [more]
D0MSQ0_PHYIT6.490e-17352.5460S ribosomal export protein NMD3 n=18 Tax=Peronos... [more]
A0A024UHG0_9STRA2.990e-17150.7860S ribosomal export protein NMD3 n=7 Tax=Aphanomy... [more]
W2I7I2_PHYPR3.950e-17152.3860S ribosomal export protein NMD3 n=9 Tax=Peronosp... [more]
A0A485KPH2_9STRA1.700e-17050.2060S ribosomal export protein NMD3 n=1 Tax=Aphanomy... [more]
A0A7S2AZN0_9STRA5.410e-17052.2160S ribosomal export protein NMD3 n=1 Tax=Dictyoch... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007064Nmd3, N-terminalPFAMPF04981NMD3coord: 34..260
e-value: 1.7E-75
score: 253.6
IPR039768Ribosomal export protein Nmd3PANTHERPTHR12746NONSENSE-MEDIATED MRNA DECAY PROTEIN 3coord: 26..521

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig778contigH-paniculata_contig778:19446..23451 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig778.15806.1mRNA_H-paniculata_contig778.15806.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig778 18904..23709 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig778.15806.1 ID=prot_H-paniculata_contig778.15806.1|Name=mRNA_H-paniculata_contig778.15806.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=561bp
MSAMDVVPAAVAPTDGLAAPPAPEPEKKMPTVLCCMCSLPIPPNPTSMCV
LCIRTQVDITEGIATNLTIHQCRGCQRYLRPPWVEAKLETRELMAVCLRK
IMGLKKVKLVDAAWIWTEPHSRRLKLKLTVQKEVGNGAVLQQAMVVTFVV
RNQQCDDCAAAFTNNTWTAVVQVRQRVDHKRTFFYLEQLILKHNAHSQCT
NIQTFKDGMDFYFTERSHSARFVDFLEGVVPTKVKHSKKLVSADNHSNIF
NFHYTYLVTLVPVCKDDLVLLPKRLAEQLGNIDRLVLAQRISSAVQFVDP
RTAQTADVTEEKYWRHEFPALLSSTRLIRYVVLNTEPLPEKARPSAPRGH
RIRKARIAEVELARDCDLGHNDNRVHAISHLGHILRAGDTVLGYDVPTAN
LPAGEASSLVESLPDVVLVRKVYPRNRDDEKESRSNDRHWKLRELETDGG
GDGGAGSNAARDEAAAEKDREHFLQQLESDRDMRRQVNLYKAGAAAPTAS
GEEVDEEEIGLDELLDGMNLDDPDAGPDEEEDVGAAVSIFEAGAAPAPNA
DLSLDDDPDL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007064Nmd3_N
IPR039768Nmd3