mRNA_H-paniculata_contig778.15806.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig778.15806.1 vs. uniprot
Match: D8LNZ8_ECTSI (60S ribosomal export protein NMD3 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNZ8_ECTSI) HSP 1 Score: 892 bits (2304), Expect = 0.000e+0 Identity = 464/561 (82.71%), Postives = 495/561 (88.24%), Query Frame = 1
Query: 295 PTDGLAAPPAPEPEKKMPTVLCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLTIHQCRGCQRYLRPPWVEAKLETRELMAVCLRKIMGLKKVKLVDAAWIWTEPHSRRLKLKLTVQKEVGNGAVLQQAMVVTFVVRNQQCDDCAAAFTNNTWTAVVQVRQRVDHKRTFFYLEQLILKHNAHSQCTNIQTFKDGMDFYFTERSHSARFVDFLEGVVPTKVKHSKKLVSADNHSNIFNFHYTYLVTLVPVCKDDLVLLPKRLAEQLGNIDRLVLAQRISSAVQFVDPRTAQTADVTEEKYWRHEFPALLSSTRLIRYVVLNTEPLPEKARPSAPR-GHRIRKARIAEVELARDCDLGHNDNRVHAISHLGHILRAGDTVLGYDVPTANLPAGEASS-LVESLPDVVLVRKVYPRNRDDEKESRSNDRHWKLRELETDGGGDGGAGS-NAARDEAAAEKDREHFLQQLESDRDMRRQVNLYKAGAAAPTASG---------EEVDEEEIGLDELLDGMNLDDPDAGPDEEEDVGAA-VSIFEAGAAPAPNADLSLDDDPDL 1938
PTDGLAAPP PEPEK+MPT+LCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLT+HQCRGCQRYLRP WVE KLE+RELMAVCLRKI GLKKVKLVDA+WIWTEPHSRRLK+KLTVQKEVGNGAVLQQAMVVTFVVRNQQCD CAAAFT+NTWTAVVQVRQRVDHKRTFFYLEQLILKHNAHSQCTNIQTFKDGMDFYFTE+SHSARFVDFLEGVVPTKVKHSKKLVSADNHSNIFNFHYTYLVTLVPVCKDDLVLLPKRLAE LGNI RL +AQRI+SAVQFVDP TAQTADVTEEKYWR+EFP+LLSSTRL+ YVVL TEPLPEKARPSAPR GHRIRKAR+AEVELAR+CDLG ND+RV A+SHLGHILRAGDTVL YDV +ANLP GEA+ L LPDVVLVRKVYPR+ D + DRHWKL ELE DGG + RDEAAAEKD E FLQQLESD+DMRRQVNLYK G AA A+ EE+DEEE+ LDELLD M LD+ +AGPD EED+GAA SIFEAGAAPAPNA+L LDDDP+L
Sbjct: 7 PTDGLAAPPPPEPEKQMPTILCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLTMHQCRGCQRYLRPGWVECKLESRELMAVCLRKISGLKKVKLVDASWIWTEPHSRRLKVKLTVQKEVGNGAVLQQAMVVTFVVRNQQCDTCAAAFTDNTWTAVVQVRQRVDHKRTFFYLEQLILKHNAHSQCTNIQTFKDGMDFYFTEKSHSARFVDFLEGVVPTKVKHSKKLVSADNHSNIFNFHYTYLVTLVPVCKDDLVLLPKRLAESLGNISRLAVAQRITSAVQFVDPLTAQTADVTEEKYWRYEFPSLLSSTRLVPYVVLGTEPLPEKARPSAPRRGHRIRKARVAEVELARECDLGRNDDRVTAVSHLGHILRAGDTVLAYDVSSANLPEGEATGDLKGRLPDVVLVRKVYPRH--DREGGGKADRHWKLGELEKDGGDXXXXXXVSEKRDEAAAEKDYERFLQQLESDKDMRRQVNLYKQGLAAKPAAADGDGAMEDVEEMDEEEVRLDELLDAMTLDNANAGPDGEEDLGAASASIFEAGAAPAPNAELLLDDDPEL 565
BLAST of mRNA_H-paniculata_contig778.15806.1 vs. uniprot
Match: A0A835ZB23_9STRA (60S ribosomal export protein NMD3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB23_9STRA) HSP 1 Score: 645 bits (1663), Expect = 2.870e-222 Identity = 338/547 (61.79%), Postives = 406/547 (74.22%), Query Frame = 1
Query: 316 PPAPEPEKKMPTVLCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLTIHQCRGCQRYLRPPWVEAKLETRELMAVCLRKIMGLKKVKLVDAAWIWTEPHSRRLKLKLTVQKEVGNGAVLQQAMVVTFVVRNQQCDDCAAAFTNNTWTAVVQVRQRVDHKRTFFYLEQLILKHNAHSQCTNIQTFKDGMDFYFTERSHSARFVDFLEGVVPTKVKHSKKLVSADNHSNIFNFHYTYLVTLVPVCKDDLVLLPKRLAEQLGNIDRLVLAQRISSAVQFVDPRTAQTADVTEEKYWRHEFPALLSSTRLIRYVVLNTEPLPEKARPSAPRGHRIRKARIAEVELARDCDLGHNDNRVHAISHLGHILRAGDTVLGYDVPTANLPAGEASSLVESLPDVVLVRKVYPRNRDDEKESRSNDRHWKLRELETDGGGDGGAGSNAARDEAAAEKDREHFLQQLESDRDMRRQVNLYK---AGAAAPTASGE---EVDEEEIGLDELLDGMNLDDPDAGPDEEEDVGAAVSIFEAGAAPAPN-ADLSLDDDPD 1935
PP+ PE + TV CC+CS PI PNPT MCV CIRTQVDITEGIA TI QCRGC R+L+P WVEA LE+RELMA+CLRK+ GL +VKLVDA+W+WTE HSRRLKLKLTVQKEV NGA+LQQA++V F VRNQQC +C A++TNNTW AVVQ+RQRVDHKRTFFYLEQLILKHNAH N+QT KDGMDF++ ER+ +AR + FLE V+P ++K+SKKL+SADNHSN +NFHYTYLVT+ PVCKDDLVLLP RLAE LG RL + QRIS+ + VDP TAQTADV + Y RHEF ALLSSTRL+ +VVL EPLP + P+ +G R+R+AR+AEV +AR+CDLG ND + AISHLGH+L+AGDTVLGYDV +ANLP L +LPDVVLVRKVY S + R W+L LE D + RD A + D E F+QQLE+D++MRRQVNL+K GAAA T + EVDEE+I ++ELLD M LDDPDA PD+ + +F AG AP N A L+LDD+ D
Sbjct: 9 PPSALPE--LATVACCICSAPIKPNPTHMCVQCIRTQVDITEGIALKPTIFQCRGCMRWLKPNWVEATLESRELMAICLRKVSGLNRVKLVDASWVWTEAHSRRLKLKLTVQKEVQNGAILQQALIVEFTVRNQQCTECQASYTNNTWKAVVQIRQRVDHKRTFFYLEQLILKHNAHVNAINVQTHKDGMDFFYAERNQAARMLSFLESVIPCRIKNSKKLISADNHSNTYNFHYTYLVTVAPVCKDDLVLLPARLAETLGQFARLAVVQRISNGIALVDPVTAQTADVNVDHYARHEFVALLSSTRLVPFVVLGLEPLPLPSAPTMAQGRRMRRARLAEVTVARECDLGANDTQFTAISHLGHLLKAGDTVLGYDVASANLPEDHLRGLKTALPDVVLVRKVYT--------SGAGKRAWRLEALEKDR-----EAELSKRDADAHDADYERFMQQLEADKEMRRQVNLFKDLAIGAAAKTGGSDDDNEVDEEQIRVEELLDDMRLDDPDAAPDDGD-----AQVFSAGEAPGVNFAALALDDEDD 535
BLAST of mRNA_H-paniculata_contig778.15806.1 vs. uniprot
Match: T0RPV6_SAPDV (60S ribosomal export protein NMD3 n=4 Tax=Saprolegniaceae TaxID=4764 RepID=T0RPV6_SAPDV) HSP 1 Score: 513 bits (1320), Expect = 7.670e-171 Identity = 266/534 (49.81%), Postives = 358/534 (67.04%), Query Frame = 1
Query: 331 PEKKMPTVLCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLTIHQCRGCQRYLRPPWVEAKLETRELMAVCLRKIMGLKKVKLVDAAWIWTEPHSRRLKLKLTVQKEVGNGAVLQQAMVVTFVVRNQQCDDCAAAFTNNTWTAVVQVRQRVDHKRTFFYLEQLILKHNAHSQCTNIQTFKDGMDFYFTERSHSARFVDFLEGVVPTKVKHSKKLVSADNHSNIFNFHYTYLVTLVPVCKDDLVLLPKRLAEQLGNIDRLVLAQRISSAVQFVDPRTAQTADVTEEKYWRHEFPALLSSTRLIRYVVLNTEPLPEKARPSAPRGHRIRKARIAEVELARDCDLGHNDNRVHAISHLGHILRAGDTVLGYDVPTANLPAGEASSLVES---LPDVVLVRKVYPRNRDDEKESRSNDRHWKLRELETDGGGDGGAGSNAARDEAAAEKDREHFLQQLESDRDMRRQVNLYKAGAAAPTASGEEVDEEE----IGLDELLDGMNLDDPDAGPDEEEDVGAAVSIFEAGAAPAPNAD 1911
PE+ +P +LCCMC++PI N +MCV C++ QVD+TEGI + +HQCRGC ++ RPPWV A+LE+REL+A+CL+KI GL KVKLVDA W+WTEPHS+RLKLKLTVQKEV NGA+LQQ+ VVTF+VRNQQCD+C A+FTNN+W AVVQVRQ+VDHKRTFFYLEQLILKH H + ++I++ DG+DF+F ER+H+ RFVDFL VP K+K +KKL+SADNHSN N+ +TY V L VCKDDLV LP +LA QLGNI L + +++S++ +DP T Q A++ +KYWR+ F AL SS +L+ Y VL++ PL P RK R+AE+E+ R+ D G ND R +HLG +L GDT +GYD+ T+ + L E+ LPDV+LVRK + R + R+WKL+ +E G A ++ E D +HFL +LE D++MR ++N+YK + D++E I ++ELLD M + EE +V +SI EA A+ N D
Sbjct: 5 PEQSLPNILCCMCAVPIKANAANMCVSCLKGQVDVTEGIPKEIIMHQCRGCLKWSRPPWVAAELESRELLAICLKKISGLNKVKLVDAGWVWTEPHSKRLKLKLTVQKEVMNGAILQQSFVVTFIVRNQQCDECQASFTNNSWKAVVQVRQKVDHKRTFFYLEQLILKHRVHEKTSSIESHPDGVDFFFVERNHALRFVDFLSETVPIKLKTAKKLISADNHSNTANYKFTYAVDLATVCKDDLVALPLKLARQLGNISSLCIVTQVTSSIHVIDPFTMQRAEIDNDKYWRYPFKALRSSKQLVEYTVLDSNPLQIPTLGGVP-VRTNRKTRLAEMEIVRNSDFGVNDTRFQTTTHLGMLLNVGDTAMGYDLSTSVFNDSDTKPLDEAGITLPDVILVRKQFLRR------VQKRSRNWKLKNIE----GIESAVPVKKAEQTKTEMDYQHFLDELEDDKEMRSKINIYKVDDDKAGDDQDMEDDDEGTGVIPVEELLDDMKI--------EENEV-EILSITEANASHGLNVD 518
BLAST of mRNA_H-paniculata_contig778.15806.1 vs. uniprot
Match: A0A7S2WJE1_9STRA (60S ribosomal export protein NMD3 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WJE1_9STRA) HSP 1 Score: 514 bits (1323), Expect = 1.320e-170 Identity = 267/511 (52.25%), Postives = 350/511 (68.49%), Query Frame = 1
Query: 349 TVLCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLTIHQCRGCQRYLRPPWVEAKLETRELMAVCLRKIMGLKKVKLVDAAWIWTEPHSRRLKLKLTVQKEVGNGAVLQQAMVVTFVVRNQQCDDCAAAFTNNTWTAVVQVRQRVDHKRTFFYLEQLILKHNAHSQCTNIQTFKDGMDFYFTERSHSARFVDFLEGVVPTKVKHSKKLVSADNHSNIFNFHYTYLVTLVPVCKDDLVLLPKRLAEQLGNIDRLVLAQRISSAVQFVDPRTAQTADVTEEKYWR------HEFPALLSSTRLIRYVVLNTEPLPEKARPSAPRGHRIRKARIAEVELARDCDLGHNDNRVHAISHLGHILRAGDTVLGYDVPTANLPAGEASSLVE--SLPDVVLVRKVYPRNRDDEKESRSNDRHWKLRELETDGGGDGGAGSNAARDEAAAEKDREHFLQQLESDRDMRRQVNLY-------KAGAAA--PTASGE----EVDEEEIGLDELLDGMNL 1818
TVLCC C PI NP+ MC C+ + DITEGIAT L++H+CRGC+R+LRP WV A+LE++ELMA+CLRKI GL KV LVDA WIWTEPHS RLK+K+T+QKEV GA+LQQ+ VV FV+RNQQC+DC +T+ TW AVVQVRQRVDHKRTF+YLEQL+LKHN HS+C +IQ+F+DGMDFYF E++ + RF DFL+G +P ++K++KKL+S+DNHSNIFNF +T+L ++P+CKDDL +LP RLA+ L +I LVL +R++ V VDP T A + Y + F ++S+ RLI Y+VL EP+ R A K R+A VE+AR DLG ND + H +SHLGHILR GDTVLGYDV ANL + + + + +LP+VVLVRK+Y S R W LR+LE D + + D + D E F+QQLE D++MR+ VNLY KA AAA P E E+DEE++ +DELL+G+++
Sbjct: 18 TVLCCQCGNPIAANPSMMCAHCLSVRSDITEGIATQLSVHRCRGCERWLRPSWVTAELESKELMALCLRKIKGLSKVNLVDAQWIWTEPHSMRLKIKVTIQKEVDGGAILQQSFVVEFVIRNQQCEDCQKQYTDGTWKAVVQVRQRVDHKRTFYYLEQLLLKHNVHSRCISIQSFRDGMDFYFAEKNEAVRFTDFLQGNIPVRIKNTKKLISSDNHSNIFNFKFTFLCIIIPLCKDDLTVLPVRLAKTLSDISPLVLVERVTRLVHLVDPLTCDRATFDSDHYGKLTSGVESSFGGIMSAPRLIEYIVLGIEPILASERAGAASKVFKSKTRLAHVEVARASDLGVNDTKFHTVSHLGHILRTGDTVLGYDVSAANLDDADVARIEKRRALPEVVLVRKLYG--------VESQRRGWTLRKLEYDAVEEP-TRTRKKDDMESDSADYERFIQQLEGDKEMRKHVNLYRREAGPRKAAAAAVDPLEEDEGEEDEMDEEQVHIDELLEGLDI 519
BLAST of mRNA_H-paniculata_contig778.15806.1 vs. uniprot
Match: A0A6G0XWA3_9STRA (60S ribosomal export protein NMD3 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XWA3_9STRA) HSP 1 Score: 511 bits (1315), Expect = 4.320e-170 Identity = 262/510 (51.37%), Postives = 348/510 (68.24%), Query Frame = 1
Query: 334 EKKMPTVLCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLTIHQCRGCQRYLRPPWVEAKLETRELMAVCLRKIMGLKKVKLVDAAWIWTEPHSRRLKLKLTVQKEVGNGAVLQQAMVVTFVVRNQQCDDCAAAFTNNTWTAVVQVRQRVDHKRTFFYLEQLILKHNAHSQCTNIQTFKDGMDFYFTERSHSARFVDFLEGVVPTKVKHSKKLVSADNHSNIFNFHYTYLVTLVPVCKDDLVLLPKRLAEQLGNIDRLVLAQRISSAVQFVDPRTAQTADVTEEKYWRHEFPALLSSTRLIRYVVLNTEPLPEKARPSAPRGHRIRKARIAEVELARDCDLGHNDNRVHAISHLGHILRAGDTVLGYDVPTANLPAGEASSLVES---LPDVVLVRKVYPRNRDDEKESRSNDRHWKLRELETDGGGDGGAGSNAARDEAAA-EKDREHFLQQLESDRDMRRQVNLYK-----AGAAAPTASGEEVDEEEIGLDELLDGMNLDDPDAG 1836
E +P +LCC+C++PI N +MCV C++ QVD+TEGI + +HQCRGC ++ RP WV A+LE+REL+A+CL+KI GL KVKLVDA WIWTEPHS+RLKLKLTVQKEV NGA+LQQ+ +VTF+VRNQQCD+C A+FTN++W AVVQVRQ+V+HKRTFFYLEQLILKH H + TNI++ DG+DF+F ER+H+ RFVDFL+ VP +K +KKL+SADNHSN N+ +TY V + PVCKDDLV LP +LA QLGNI L L +++S++ +DP T Q A++ EKYWR+ F AL SS +L Y VL++ P+ + P RK R+AE+E+ R+ D G ND R +SHLG +L GDT +GYD+ T+ + L E+ LPDVVLVRK + R + R WKL+ +E G S +D+ + D EHFL LE D++MR ++N+YK AS E+ D +I LDELLD M ++D + G
Sbjct: 5 EHSLPDILCCICAVPIKANAANMCVSCLKGQVDVTEGIPKEIIMHQCRGCLKWSRPQWVSAELESRELLAICLKKITGLNKVKLVDAGWIWTEPHSKRLKLKLTVQKEVMNGAILQQSFIVTFIVRNQQCDECQASFTNHSWKAVVQVRQKVEHKRTFFYLEQLILKHRVHEKTTNIESQPDGVDFFFVERNHALRFVDFLQETVPISLKTAKKLISADNHSNTANYKFTYAVDIAPVCKDDLVALPLKLARQLGNISSLCLVTQVTSSIHVIDPFTMQRAEIENEKYWRYPFKALRSSKQLTEYTVLDSTPMEIPMKGGVP-VRTNRKTRLAELEIVRNSDFGVNDTRFQTVSHLGMLLNVGDTAMGYDLVTSVFNDADTKPLDEAGITLPDVVLVRKQFLRR------VQKRQRKWKLKTIE-------GIESMGKKDDPTKHDLDYEHFLNDLEQDKEMRSRINIYKNDEXXXXXXXXXASMEDGDGGDIPLDELLDDMTMEDQENG 500
BLAST of mRNA_H-paniculata_contig778.15806.1 vs. uniprot
Match: D0MSQ0_PHYIT (60S ribosomal export protein NMD3 n=18 Tax=Peronosporaceae TaxID=4777 RepID=D0MSQ0_PHYIT) HSP 1 Score: 508 bits (1309), Expect = 3.940e-169 Identity = 269/512 (52.54%), Postives = 353/512 (68.95%), Query Frame = 1
Query: 340 KMPTVLCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLTIHQCRGCQRYLRPPWVEAKLETRELMAVCLRKIMGLKKVKLVDAAWIWTEPHSRRLKLKLTVQKEVGNGAVLQQAMVVTFVVRNQQCDDCAAAFTNNTWTAVVQVRQRVDHKRTFFYLEQLILKHNAHSQCTNIQTFKDGMDFYFTERSHSARFVDFLEGVVPTKVKHSKKLVSADNHSNIFNFHYTYLVTLVPVCKDDLVLLPKRLAEQLGNIDRLVLAQRISSAVQFVDPRTAQTADVTEEKYWRHEFPALLSSTRLIRYVVLNTEPLPEKARPSAP-RGHRI-RKARIAEVELARDCDLGHNDNRVHAISHLGHILRAGDTVLGYDVPTANLPAGEASSLVES---LPDVVLVRKVYPRNRDDEKESRSNDRHWKLRELETDGGGDGGAGSNAARDEAAAEKDREHFLQQLESDRDMRRQVNLYK--AGAAAPTASGEEVDEEEIG-----LDELLDGMNLDDPDAGP 1839
+MPT+LCCMC+ PI N + CV C+++QVD+TEGI + IHQCRGC R+ RPPWV A+LE+REL+A+CL+KI L +VKL+DA WIWTEPHSRRLKLKLTVQKEV + ++QQ+ VVTFVVRNQQCD C A+F N +W AVVQVRQRVDHKRTFF+LEQLILKH AH + TNI++ DG+DF+F+ER+H+ RFVDFL+ VP KVK +KKL+SADNHSN N+ +TY V + PVCKDDLVLLP +LA LGN+ L L Q ++S++ VDP T Q A+V EKYWR+ F AL S + VL++ P+ A PS R R+ RK R+A++E+ RD D G ND R +SHLG +L GD+ GYD+ +A + LV+S LPDVVLV+K++PR + R+WKL+++E G AG D + E+D E F+ +LE D++MR Q+NLYK A P + +DE+++G L ELLD + + D D P
Sbjct: 7 QMPTILCCMCATPIVANAANTCVSCLKSQVDVTEGIPKEVIIHQCRGCMRWSRPPWVAAELESRELLAMCLKKINNLNRVKLIDANWIWTEPHSRRLKLKLTVQKEVLSKMIMQQSFVVTFVVRNQQCDACQASFANQSWRAVVQVRQRVDHKRTFFFLEQLILKHRAHEKTTNIESHPDGVDFFFSERNHALRFVDFLQESVPMKVKTAKKLISADNHSNTHNYKFTYAVEIAPVCKDDLVLLPVKLARMLGNMSCLCLVQSVTSSIHVVDPFTTQVAEVDSEKYWRYPFRALRSIKAMTDLTVLDSNPM---AIPSGGGRAIRVTRKTRLADMEVVRDADFGVNDTRFRTVSHLGMLLHVGDSARGYDLTSAVFNDADLVPLVQSGLTLPDVVLVKKMFPRR------IQKRARNWKLKKME----GVEQAGPVRKADLSKEEQDYEQFMDELEEDKEMRSQINLYKDETKPAQPAEDDDAMDEDDVGAPAVELHELLDDLAMKDDDPTP 505
BLAST of mRNA_H-paniculata_contig778.15806.1 vs. uniprot
Match: A0A024UHG0_9STRA (60S ribosomal export protein NMD3 n=7 Tax=Aphanomyces TaxID=100860 RepID=A0A024UHG0_9STRA) HSP 1 Score: 504 bits (1298), Expect = 1.770e-167 Identity = 260/512 (50.78%), Postives = 345/512 (67.38%), Query Frame = 1
Query: 331 PEKKMPTVLCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLTIHQCRGCQRYLRPPWVEAKLETRELMAVCLRKIMGLKKVKLVDAAWIWTEPHSRRLKLKLTVQKEVGNGAVLQQAMVVTFVVRNQQCDDCAAAFTNNTWTAVVQVRQRVDHKRTFFYLEQLILKHNAHSQCTNIQTFKDGMDFYFTERSHSARFVDFLEGVVPTKVKHSKKLVSADNHSNIFNFHYTYLVTLVPVCKDDLVLLPKRLAEQLGNIDRLVLAQRISSAVQFVDPRTAQTADVTEEKYWRHEFPALLSSTRLIRYVVLNTEPLPEKARPSAPRGHRIRKARIAEVELARDCDLGHNDNRVHAISHLGHILRAGDTVLGYDVPTANLPAGEASSLVE---SLPDVVLVRKVYPRNRDDEKESRSNDRHWKLRELETDGGGDGGAGSNAARDEAAAEKDREHFLQQLESDRDMRRQVNLYKAGAAAPTASGEEVDEEE------------IGLDELLDGMNLD 1821
PE ++P +LCC+C++PI N +MCV C++ QVD+TEGI + +HQCRGC ++ RP WV A LE+REL+A+CL+KI GL KVKLVDA WIWTEPHS+RLKLKLTVQKEV NGA+LQQ+ +VTF+VRNQQCDDC A+FTN++W AVVQVRQ+V+HKRTFF+LEQLILKH H + T+I++ DG+DF+F ER+H+ RFVDFL+ VP +K +KKL+SADNHSN N+ +TY V + PVCKDDLV LP +LA QLGNI L L +++S++ +DP T Q A++ +KYWR+ F AL SS +L Y VL++ PL + P RK R+A+V++ R+ D G ND R H ++HLG +L GDT +GYD+ T+ + L E SLPDVVLVRK + R + R WKL+ +E G D+ + D EHFL LE D+DMR ++N+YKA G + D+ I LDELLD +N+D
Sbjct: 5 PEHELPDILCCICAVPIKANAANMCVSCLKGQVDVTEGIPKEIIMHQCRGCLKWSRPQWVSADLESRELLAICLKKITGLNKVKLVDAGWIWTEPHSKRLKLKLTVQKEVMNGAILQQSFIVTFIVRNQQCDDCQASFTNHSWKAVVQVRQKVEHKRTFFFLEQLILKHRVHEKTTSIESQPDGVDFFFVERNHALRFVDFLQETVPISLKTAKKLISADNHSNTANYKFTYAVDIAPVCKDDLVALPLKLARQLGNISSLCLVTQVTSSIHVIDPFTMQRAEIDNDKYWRYPFKALRSSKQLTEYTVLDSSPLEISTKGGIP-VRTNRKTRLADVDIVRNSDFGVNDMRFHTVTHLGMLLNVGDTAMGYDLSTSVFNDLDTKPLDEAGISLPDVVLVRKQFLRR------VQKRSRKWKLKTIE----GIEPTMPLKKADQTKHDLDYEHFLNDLEEDKDMRSRINIYKA------TDGNDHDDXXXXXXXXXXXXGAIPLDELLDDLNMD 499
BLAST of mRNA_H-paniculata_contig778.15806.1 vs. uniprot
Match: W2I7I2_PHYPR (60S ribosomal export protein NMD3 n=9 Tax=Peronosporaceae TaxID=4777 RepID=W2I7I2_PHYPR) HSP 1 Score: 504 bits (1297), Expect = 2.330e-167 Identity = 264/504 (52.38%), Postives = 351/504 (69.64%), Query Frame = 1
Query: 340 KMPTVLCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLTIHQCRGCQRYLRPPWVEAKLETRELMAVCLRKIMGLKKVKLVDAAWIWTEPHSRRLKLKLTVQKEVGNGAVLQQAMVVTFVVRNQQCDDCAAAFTNNTWTAVVQVRQRVDHKRTFFYLEQLILKHNAHSQCTNIQTFKDGMDFYFTERSHSARFVDFLEGVVPTKVKHSKKLVSADNHSNIFNFHYTYLVTLVPVCKDDLVLLPKRLAEQLGNIDRLVLAQRISSAVQFVDPRTAQTADVTEEKYWRHEFPALLSSTRLIRYVVLNTEPLPEKARPSAP-RGHRI-RKARIAEVELARDCDLGHNDNRVHAISHLGHILRAGDTVLGYDVPTANLPAGEASSLVES---LPDVVLVRKVYPRNRDDEKESRSNDRHWKLRELETDGGGDGGAGSNAARDEAAAEKDREHFLQQLESDRDMRRQVNLYKAGAA-APTASGEEVDEEEIG-----LDELLDGMNL 1818
+MPT+LCCMC+ PI N + CV C+++QVD+TEGI + IHQCRGC R+ RPPWV A+LE+REL+A+CL+KI L +VKL+DA WIWTEPHSRRLKLKLTVQKEV + ++QQ+ VVTFVVRNQQCD C A+F N +W AVVQVRQRVDHKRTFF+LEQLILKH AH + TNI++ DG+DF+F+ER+H+ RFVDFL+ VP KVK +KKL+SADNHSN N+ +TY V + PVCKDDLVLLP +LA LGN+ L L Q ++S++ VDP T Q A++ EKYWR+ F AL S + + VL++ P+ A PS R R+ RK R+A++E+ RD D G ND R +SHLG +L GD+ GYD+ +A + LV+S LPDVVLV+K++PR + R+WKL+++E G AG D + E+D E FL +LE D+++R Q+NLYK A A + ++E+++G L ELLD + +
Sbjct: 7 QMPTILCCMCATPIVANAANTCVSCLKSQVDVTEGIPKEVIIHQCRGCMRWSRPPWVAAELESRELLAMCLKKINNLNRVKLIDANWIWTEPHSRRLKLKLTVQKEVMSKMIMQQSFVVTFVVRNQQCDACQASFANQSWRAVVQVRQRVDHKRTFFFLEQLILKHRAHEKTTNIESHPDGVDFFFSERNHALRFVDFLQESVPMKVKTAKKLISADNHSNTHNYKFTYAVEIAPVCKDDLVLLPVKLARMLGNMSCLCLVQSVTSSIHVVDPFTTQVAEIDSEKYWRYPFRALRSIKAMTDFTVLDSNPM---AIPSGGGRAIRVTRKTRLADMEVVRDADFGVNDTRFRTVSHLGMLLHVGDSARGYDLTSAVFNDADLVPLVQSGMTLPDVVLVKKMFPRR------IQKRARNWKLKKME----GVEQAGPVRKTDLSKEEQDYEQFLDELEEDKELRSQINLYKDDTKPAKPADDDAMEEDDVGAPAVELHELLDDLAM 497
BLAST of mRNA_H-paniculata_contig778.15806.1 vs. uniprot
Match: A0A485KPH2_9STRA (60S ribosomal export protein NMD3 n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KPH2_9STRA) HSP 1 Score: 502 bits (1293), Expect = 9.960e-167 Identity = 256/510 (50.20%), Postives = 343/510 (67.25%), Query Frame = 1
Query: 334 EKKMPTVLCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLTIHQCRGCQRYLRPPWVEAKLETRELMAVCLRKIMGLKKVKLVDAAWIWTEPHSRRLKLKLTVQKEVGNGAVLQQAMVVTFVVRNQQCDDCAAAFTNNTWTAVVQVRQRVDHKRTFFYLEQLILKHNAHSQCTNIQTFKDGMDFYFTERSHSARFVDFLEGVVPTKVKHSKKLVSADNHSNIFNFHYTYLVTLVPVCKDDLVLLPKRLAEQLGNIDRLVLAQRISSAVQFVDPRTAQTADVTEEKYWRHEFPALLSSTRLIRYVVLNTEPLPEKARPSAPRGHRIRKARIAEVELARDCDLGHNDNRVHAISHLGHILRAGDTVLGYDVPTANLPAGEASSLVES---LPDVVLVRKVYPRNRDDEKESRSNDRHWKLRELETDGGGDGGAGSNAARDEAAAEKDREHFLQQLESDRDMRRQVNLYKAGA--------AAPTASGEEVDEEEIGLDELLDGMNLDDPD 1830
E +P +LCC+C++PI N +MCV C++ QVD+TEGI + IHQCRGC ++ RPPWV A LE+REL+A+CL+KI GL KVKLVDA WIWTEPHS+RLKLKLTVQKEV NGA+LQQ+ +VTF+VRNQQCD+C A+FTN++W AVVQVRQ+V+HKRTFF+LEQLILKH H + T+I++ DG+DF+F ER+H+ RFVDFL+ VP +K +KKL+SADNHSN N+ +TY+V + PVCKDDLV LP +LA QLGNI L L +++S++ +DP T Q A++ +KYWR F AL SS +L Y VL++ P+ + P RK R+AE+E+ R+ D G ND R +SHLG +L GDT +GYD+ T+ + L E+ LPDV+LVRK + R + R WKL+ +E G A D+ + D EHFL LE D++MR ++N+YK ++ I L+ELLD MN+D+ D
Sbjct: 6 EHDLPNILCCICAVPIKANAANMCVSCLKGQVDVTEGIPKEIIIHQCRGCLKWSRPPWVSADLESRELLAICLKKITGLNKVKLVDAGWIWTEPHSKRLKLKLTVQKEVMNGAILQQSFIVTFIVRNQQCDECQASFTNHSWKAVVQVRQKVEHKRTFFFLEQLILKHRVHEKTTSIESQPDGVDFFFVERNHALRFVDFLQETVPISLKTAKKLISADNHSNTANYKFTYMVDIAPVCKDDLVALPLKLARQLGNISSLCLVTQVTSSIHVIDPFTMQRAEIDNDKYWRSPFKALCSSKKLTEYTVLDSTPMEIPVKGGVP-VRTNRKTRLAELEVVRNVDFGVNDTRFQTVSHLGMLLNVGDTAMGYDLSTSVFNDLDTKPLDEAGITLPDVILVRKQFLRR------VQKRSRKWKLKTIE----GIEPAVPLKKADQTKQDLDYEHFLNDLEEDKEMRAKINIYKVDQDDXXXXXXXXXXXXXDDRGASSIPLEELLDDMNMDEAD 504
BLAST of mRNA_H-paniculata_contig778.15806.1 vs. uniprot
Match: A0A7S2AZN0_9STRA (60S ribosomal export protein NMD3 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AZN0_9STRA) HSP 1 Score: 502 bits (1292), Expect = 1.110e-166 Identity = 272/521 (52.21%), Postives = 359/521 (68.91%), Query Frame = 1
Query: 400 MCVLCIRTQVDITEGIATNLTIHQCRGCQRYLRPPWVEAKLETRELMAVCLRKIMGLKKVKLVDAAWIWTEPHSRRLKLKLTVQKEVGNGAVLQQAMVVTFVVRNQQCDDCAAAFTNNTWTAVVQVRQRVDHKRTFFYLEQLILKHNAHSQCTNIQTFKDGMDFYFTERSHSARFVDFLEGVVPTKVKHSKKLVSADNHSNIFNFHYTYLVTLVPVCKDDLVLLPKRLAEQLGNIDRLVLAQRISSAVQFVDPRTAQTADVTEEKYWR-HEFPALLSSTRLIRYVVLNTEPLP-EKARPSAPRGHRIRKARIAEVELARDCDLGHNDNRVHAISHLGHILRAGDTVLGYDVPTANLPAGEASSLVE-----SLPDVVLVRKVYPRNRDDEKESRSNDRHWKLRELET-DGGGDGGAGSNAARDEAAAEKDREHFLQQLESDRDMRRQVNLYKA-------GAAAPTASGEEVDEEEIGLDELLDGMNLDDPDAGPDEEEDVGAAVSIFEAGAAPAPNADLS 1917
MC C+++ VDIT+GI T L++++CRGCQ++L+P W+EA LE+ EL+A+CL+KI GL KVKLVDA+W+WTEPHS RLK+KL +QKEV N AVLQQA VV +V+RNQQC DC +T W AVVQVRQRVDHKRTF+YLEQL+LKH H+ C +IQTF+DGMDFYF ER+ + RF DFL+ VVP ++K++KKL+S+DNHSN+FN+ +T+L + P+CKDDLV+LPK LA LGNI LVL +R+S+ + VDP T Q A E +++ F A+LS+ RL+ YVVL TE L ++ S P + RK R+ EVELAR DLG ND R+ +SHLGH+LRAGDTVLGYD+ L + + ++ + +LPD LVRK+Y + E+ + R WKL+EL + +GG G+ E A KD E F+QQLE DR+MRRQVNL+KA A T E+DE+EI + ELL+ + LDD P + ED+ + A AA NADLS
Sbjct: 1 MCAQCLKSAVDITDGIPTQLSVYRCRGCQKWLKPGWIEADLESGELLALCLKKIRGLNKVKLVDASWVWTEPHSMRLKIKLNIQKEVMNAAVLQQAFVVEYVIRNQQCSDCQKQYTGGVWKAVVQVRQRVDHKRTFYYLEQLLLKHGVHTNCLSIQTFRDGMDFYFAERNQAVRFTDFLQTVVPIRMKNTKKLISSDNHSNLFNYKFTHLGVIAPLCKDDLVVLPKALALTLGNISPLVLIERVSTFIHLVDPFTCQRASFDIEHFYKVGAFGAVLSAARLVEYVVLGTEDLILDERESSTPTPTQKRKKRLVEVELARSADLGVNDTRLTCVSHLGHLLRAGDTVLGYDLERGALHSLDRETMAQVEKRRALPDSALVRKLYGVGSGGDGET-TKSRRWKLKELAVQEEERNGGKGA-----EDVAMKDYEQFMQQLEGDREMRRQVNLFKATDDDQDMDTAVATDDACEMDEQEIRIGELLEDLGLDDET--PADPEDMAFLAADAMANAA-GSNADLS 512 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig778.15806.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig778.15806.1 >prot_H-paniculata_contig778.15806.1 ID=prot_H-paniculata_contig778.15806.1|Name=mRNA_H-paniculata_contig778.15806.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=561bp MSAMDVVPAAVAPTDGLAAPPAPEPEKKMPTVLCCMCSLPIPPNPTSMCVback to top mRNA from alignment at H-paniculata_contig778:18904..23709- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig778.15806.1 ID=mRNA_H-paniculata_contig778.15806.1|Name=mRNA_H-paniculata_contig778.15806.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4806bp|location=Sequence derived from alignment at H-paniculata_contig778:18904..23709- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig778:18904..23709- >mRNA_H-paniculata_contig778.15806.1 ID=mRNA_H-paniculata_contig778.15806.1|Name=mRNA_H-paniculata_contig778.15806.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3366bp|location=Sequence derived from alignment at H-paniculata_contig778:18904..23709- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |