mRNA_H-paniculata_contig77759.15804.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig77759.15804.1 vs. uniprot
Match: A0A5F8ADV9_MACMU (Uncharacterized protein n=1 Tax=Macaca mulatta TaxID=9544 RepID=A0A5F8ADV9_MACMU) HSP 1 Score: 145 bits (366), Expect = 2.390e-43 Identity = 72/92 (78.26%), Postives = 73/92 (79.35%), Query Frame = 1
Query: 1 FFFFLRQSLALLPRLECNGIILAHCNLCLLGSSDSPASASRVAGTTGTRHHTQLIFCIFSRDGVSPC*PGWS*SPDLVIHPPWPPKVLGLQA 276
FF FLRQSL L PRLEC+G I A C L LLGS SPASA RVAGTTG RHH LIFCIFSRD VSPC PGWS SPDLVI PP PPKVLGLQA
Sbjct: 23 FFVFLRQSLTLSPRLECSGAISARCKLRLLGSRHSPASAFRVAGTTGARHHAWLIFCIFSRDSVSPCQPGWSRSPDLVIRPPRPPKVLGLQA 114
BLAST of mRNA_H-paniculata_contig77759.15804.1 vs. uniprot
Match: A0A5F7ZIP8_MACMU (Uncharacterized protein n=1 Tax=Macaca mulatta TaxID=9544 RepID=A0A5F7ZIP8_MACMU) HSP 1 Score: 143 bits (361), Expect = 9.880e-43 Identity = 69/92 (75.00%), Postives = 73/92 (79.35%), Query Frame = 1
Query: 1 FFFFLRQSLALLPRLECNGIILAHCNLCLLGSSDSPASASRVAGTTGTRHHTQLIFCIFSRDGVSPC*PGWS*SPDLVIHPPWPPKVLGLQA 276
F F + LAL PRLEC+G I HCNLCL GSSDSPAS+SRVAGTTG HH LIFCIFS+DGVSPC PGWS SPDLVI PP P KVLGLQA
Sbjct: 12 FVFCFERRLALSPRLECSGAISGHCNLCLPGSSDSPASSSRVAGTTGACHHAWLIFCIFSKDGVSPCWPGWSQSPDLVIRPPQPHKVLGLQA 103
BLAST of mRNA_H-paniculata_contig77759.15804.1 vs. uniprot
Match: G7PXF9_MACFA (Uncharacterized protein (Fragment) n=1 Tax=Macaca fascicularis TaxID=9541 RepID=G7PXF9_MACFA) HSP 1 Score: 142 bits (358), Expect = 1.860e-42 Identity = 70/89 (78.65%), Postives = 73/89 (82.02%), Query Frame = 1
Query: 7 FFLRQSLALLPRLECNGIILAHCNLCLLGSSDSPASASRVAGTTGTRHHTQLIFCIFSRDGVSPC*PGWS*SPDLVIHPPWPPKVLGLQ 273
FFLR+SLAL PRLEC+G I AHC L GS SPASASRVAGTTG RHH +LIFCIFSRDGVSPC PGWS SPDLVI P PPKVLGLQ
Sbjct: 1 FFLRRSLALSPRLECSGPISAHCKRRLPGSRHSPASASRVAGTTGARHHARLIFCIFSRDGVSPCWPGWSRSPDLVIRLPQPPKVLGLQ 89
BLAST of mRNA_H-paniculata_contig77759.15804.1 vs. uniprot
Match: A0A8I5NUM6_PAPAN (Uncharacterized protein n=1 Tax=Papio anubis TaxID=9555 RepID=A0A8I5NUM6_PAPAN) HSP 1 Score: 144 bits (363), Expect = 4.130e-42 Identity = 71/89 (79.78%), Postives = 72/89 (80.90%), Query Frame = 1
Query: 1 FFFFLRQSLALLPRLECNGIILAHCNLCLLGSSDSPASASRVAGTTGTRHHTQLIFCIFSRDGVSPC*PGWS*SPDLVIHPPWPPKVLG 267
F FFLR SL L PRLEC+G ILAHC L L GS SPASASRVAGTTG RHHT LIFCIFSRDGVSPC PGWS SP LVI PP PPKVLG
Sbjct: 59 FLFFLRGSLTLSPRLECSGAILAHCKLRLPGSRHSPASASRVAGTTGARHHTWLIFCIFSRDGVSPCQPGWSQSPHLVIRPPQPPKVLG 147
BLAST of mRNA_H-paniculata_contig77759.15804.1 vs. uniprot
Match: A0A7N9D7W8_MACFA (Uncharacterized protein n=1 Tax=Macaca fascicularis TaxID=9541 RepID=A0A7N9D7W8_MACFA) HSP 1 Score: 143 bits (360), Expect = 4.450e-42 Identity = 72/91 (79.12%), Postives = 78/91 (85.71%), Query Frame = -2
Query: 3 ACNPSTLGGQGGWITRSGDQDHPG*HGETPSLLKIQKISWVWWRVPVVPATREAEAGESLEPRRQRLQ*AKIMPLHSSLGNRARLCLKKKK 275
ACNPSTLGG+GG ITRSGD+DHP HG+TPSLLKIQKIS WWR PVVPATREAEAGE EP R+ LQ A++ PLHSSLGNRARL LKKKK
Sbjct: 10 ACNPSTLGGRGGRITRSGDRDHPDKHGKTPSLLKIQKISLAWWRAPVVPATREAEAGEWREPGRRSLQGAEMAPLHSSLGNRARLHLKKKK 100
BLAST of mRNA_H-paniculata_contig77759.15804.1 vs. uniprot
Match: A0A5F4WD36_CALJA (Uncharacterized protein n=2 Tax=Callithrix jacchus TaxID=9483 RepID=A0A5F4WD36_CALJA) HSP 1 Score: 140 bits (354), Expect = 1.500e-41 Identity = 65/81 (80.25%), Postives = 72/81 (88.89%), Query Frame = -2
Query: 33 ACNPSTLGGQGGWITRSGDQDHPG*HGETPSLLKIQKISWVWWRVPVVPATREAEAGESLEPRRQRLQ*AKIMPLHSSLGN 275
ACNPSTLGG+GGWITRS ++DHPG HGETPSLLKIQKISW WWRVPV+PAT+EAEAGE EPRR+RL A+I PLHSS GN
Sbjct: 8 ACNPSTLGGRGGWITRSRNRDHPGQHGETPSLLKIQKISWAWWRVPVIPATQEAEAGELPEPRRRRLPGAEIAPLHSSPGN 88
BLAST of mRNA_H-paniculata_contig77759.15804.1 vs. uniprot
Match: A0A8I5NL67_PAPAN (Uncharacterized protein n=1 Tax=Papio anubis TaxID=9555 RepID=A0A8I5NL67_PAPAN) HSP 1 Score: 139 bits (351), Expect = 2.170e-41 Identity = 69/92 (75.00%), Postives = 74/92 (80.43%), Query Frame = 1
Query: 1 FFFFLRQSLALLPRLECNGIILAHCNLCLLGSSDSPASASRVAGTTGTRHHTQLIFCIFSRDGVSPC*PGWS*SPDLVIHPPWPPKVLGLQA 276
+FFFLR+SLAL PRLEC+G I AHC L L GS SPASASRVAGTTG RHH +LIFC+FS DGVSP WS SPDLVI P WPPKVLGLQA
Sbjct: 2 YFFFLRRSLALSPRLECSGQISAHCKLRLPGSRHSPASASRVAGTTGARHHARLIFCVFSTDGVSP----WSRSPDLVIRPSWPPKVLGLQA 89
BLAST of mRNA_H-paniculata_contig77759.15804.1 vs. uniprot
Match: A0A8I5NBC2_PAPAN (Uncharacterized protein n=1 Tax=Papio anubis TaxID=9555 RepID=A0A8I5NBC2_PAPAN) HSP 1 Score: 140 bits (354), Expect = 3.460e-41 Identity = 70/92 (76.09%), Postives = 75/92 (81.52%), Query Frame = 1
Query: 1 FFFFLRQSLALLPRLECNGIILAHCNLCLLGSSDSPASASRVAGTTGTRHHTQLIFCIFSRDGVSPC*PGWS*SPDLVIHPPWPPKVLGLQA 276
FFFFLR SL LL LE +G+I AHCN L GSSDSPASASRVAG TG +H+ LIFCIFSRDGVSPC PGWS +PDLVI PP PPKVLGLQA
Sbjct: 48 FFFFLRWSLTLLAGLEFSGVISAHCNHRLPGSSDSPASASRVAGITGVQHYMWLIFCIFSRDGVSPCWPGWSRTPDLVIRPPRPPKVLGLQA 139
BLAST of mRNA_H-paniculata_contig77759.15804.1 vs. uniprot
Match: A0A5F7ZI80_MACMU (Uncharacterized protein n=1 Tax=Macaca mulatta TaxID=9544 RepID=A0A5F7ZI80_MACMU) HSP 1 Score: 140 bits (353), Expect = 3.510e-41 Identity = 70/91 (76.92%), Postives = 72/91 (79.12%), Query Frame = 1
Query: 4 FFFLRQSLALLPRLECNGIILAHCNLCLLGSSDSPASASRVAGTTGTRHHTQLIFCIFSRDGVSPC*PGWS*SPDLVIHPPWPPKVLGLQA 276
F F RQSLAL PRLEC+ I AHC L LLGS SPASAS VAGTTG RHH +LIFCIFSRDGVSPC PGWS PDLVI P PPKVLGLQA
Sbjct: 38 FIFSRQSLALSPRLECSDAISAHCKLRLLGSRHSPASASPVAGTTGARHHARLIFCIFSRDGVSPCPPGWSRYPDLVIRLPRPPKVLGLQA 128
BLAST of mRNA_H-paniculata_contig77759.15804.1 vs. uniprot
Match: A0A5F7Z8B0_MACMU (Uncharacterized protein n=1 Tax=Macaca mulatta TaxID=9544 RepID=A0A5F7Z8B0_MACMU) HSP 1 Score: 140 bits (352), Expect = 4.280e-41 Identity = 68/92 (73.91%), Postives = 74/92 (80.43%), Query Frame = 1
Query: 1 FFFFLRQSLALLPRLECNGIILAHCNLCLLGSSDSPASASRVAGTTGTRHHTQLIFCIFSRDGVSPC*PGWS*SPDLVIHPPWPPKVLGLQA 276
F +FLR +L + PRLEC+G I AHC L L GS SPASASRVAGTTG R +LIFCIFSRDGVSPC PGWS SPDLVIHPP PPKVLGL+A
Sbjct: 32 FIYFLRWTLTVSPRLECSGAISAHCKLHLPGSRHSPASASRVAGTTGARLRARLIFCIFSRDGVSPCWPGWSRSPDLVIHPPRPPKVLGLRA 123 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig77759.15804.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig77759.15804.1 >prot_H-paniculata_contig77759.15804.1 ID=prot_H-paniculata_contig77759.15804.1|Name=mRNA_H-paniculata_contig77759.15804.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=68bp FFFFLRQSLALLPRLECNGIILAHCNLCLLGSSDSPASASRVAGTTGTRHback to top mRNA from alignment at H-paniculata_contig77759:264..539- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig77759.15804.1 ID=mRNA_H-paniculata_contig77759.15804.1|Name=mRNA_H-paniculata_contig77759.15804.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=276bp|location=Sequence derived from alignment at H-paniculata_contig77759:264..539- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig77759:264..539- >mRNA_H-paniculata_contig77759.15804.1 ID=mRNA_H-paniculata_contig77759.15804.1|Name=mRNA_H-paniculata_contig77759.15804.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=408bp|location=Sequence derived from alignment at H-paniculata_contig77759:264..539- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |